RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 FCARP24071 287 aa14.09□□□□□ -0.15
PRKDC-206ENST00000536429 CYP2F1P24903 491 aa14.09□□□□□ -0.15
PRKDC-206ENST00000536429 RPL13P26373 211 aaKnown RBP14.09□□□□□ -0.15
PRKDC-206ENST00000536429 ATICP31939 592 aa14.09□□□□□ -0.15
PRKDC-206ENST00000536429 PSMC2P35998 433 aaKnown RBP14.09□□□□□ -0.15
PRKDC-206ENST00000536429 AP3M2P53677 418 aa14.09□□□□□ -0.15
PRKDC-206ENST00000536429 PLD1Q13393 1074 aa14.09□□□□□ -0.15
PRKDC-206ENST00000536429 TEAD2Q15562 447 aa14.09□□□□□ -0.15
PRKDC-206ENST00000536429 DDR2Q16832 855 aa14.09□□□□□ -0.15
PRKDC-206ENST00000536429 STXBP5Q5T5C0 1151 aa14.09□□□□□ -0.15
PRKDC-206ENST00000536429 CYP4A22Q5TCH4 519 aa14.09□□□□□ -0.15
PRKDC-206ENST00000536429 FAM171BQ6P995 826 aa14.09□□□□□ -0.15
PRKDC-206ENST00000536429 SCARA5Q6ZMJ2 495 aa14.09□□□□□ -0.15
PRKDC-206ENST00000536429 INTS8Q75QN2 995 aaKnown RBP14.09□□□□□ -0.15
PRKDC-206ENST00000536429 GAREM2Q75VX8 874 aa14.09□□□□□ -0.15
PRKDC-206ENST00000536429 ZC3H3Q8IXZ2 948 aaKnown RBP14.09□□□□□ -0.15
PRKDC-206ENST00000536429 SPPL2BQ8TCT7 592 aa14.09□□□□□ -0.15
PRKDC-206ENST00000536429 C2orf15Q8WU43 125 aaKnown RBP14.09□□□□□ -0.15
PRKDC-206ENST00000536429 PSMG2Q969U7 264 aa14.09□□□□□ -0.15
PRKDC-206ENST00000536429 MYLPFQ96A32 169 aa14.09□□□□□ -0.15
PRKDC-206ENST00000536429 SYAP1Q96A49 352 aaPredicted RBP14.09□□□□□ -0.15
PRKDC-206ENST00000536429 PLA2G2FQ9BZM2 168 aa14.09□□□□□ -0.15
PRKDC-206ENST00000536429 DPEP3Q9H4B8 488 aa14.09□□□□□ -0.15
PRKDC-206ENST00000536429 MMRN2Q9H8L6 949 aa14.09□□□□□ -0.15
PRKDC-206ENST00000536429 VRTNQ9H8Y1 702 aa14.09□□□□□ -0.15
PRKDC-206ENST00000536429 HSFX1Q9UBD0 423 aa14.09□□□□□ -0.15
PRKDC-206ENST00000536429 ZFP37Q9Y6Q3 630 aaPredicted RBP14.09□□□□□ -0.15
PRKDC-206ENST00000536429 PPP1R3GB7ZBB8 358 aa14.08□□□□□ -0.16
PRKDC-206ENST00000536429 ZNF197O14709 1029 aa14.08□□□□□ -0.16
PRKDC-206ENST00000536429 IKBKBO14920 756 aa14.08□□□□□ -0.16
PRKDC-206ENST00000536429 TACC1O75410 805 aa14.08□□□□□ -0.16
PRKDC-206ENST00000536429 HLA-DRAP01903 254 aa14.08□□□□□ -0.16
PRKDC-206ENST00000536429 CFHP08603 1231 aa14.08□□□□□ -0.16
PRKDC-206ENST00000536429 PCSK1P29120 753 aa14.08□□□□□ -0.16
PRKDC-206ENST00000536429 GNL1P36915 607 aaPredicted RBP14.08□□□□□ -0.16
PRKDC-206ENST00000536429 TUFMP49411 452 aaKnown RBP14.08□□□□□ -0.16
PRKDC-206ENST00000536429 TNNC1P63316 161 aa14.08□□□□□ -0.16
PRKDC-206ENST00000536429 SMARCB1Q12824 385 aa14.08□□□□□ -0.16
PRKDC-206ENST00000536429 MORC3Q14149 939 aa14.08□□□□□ -0.16
PRKDC-206ENST00000536429 CAMK4Q16566 473 aa14.08□□□□□ -0.16
PRKDC-206ENST00000536429 NFE2Q16621 373 aaPredicted RBP14.08□□□□□ -0.16
PRKDC-206ENST00000536429 FAM78AQ5JUQ0 283 aa14.08□□□□□ -0.16
PRKDC-206ENST00000536429 IER5LQ5T953 404 aa14.08□□□□□ -0.16
PRKDC-206ENST00000536429 TANGO2Q6ICL3 276 aa14.08□□□□□ -0.16
PRKDC-206ENST00000536429 KLHL10Q6JEL2 608 aa14.08□□□□□ -0.16
PRKDC-206ENST00000536429 OR6B3Q8NGW1 331 aa14.08□□□□□ -0.16
PRKDC-206ENST00000536429 FAM200AQ8TCP9 573 aa14.08□□□□□ -0.16
PRKDC-206ENST00000536429 TAS1R2Q8TE23 839 aa14.08□□□□□ -0.16
PRKDC-206ENST00000536429 PBXIP1Q96AQ6 731 aa14.08□□□□□ -0.16
PRKDC-206ENST00000536429 IL21Q9HBE4 155 aa14.08□□□□□ -0.16
PRKDC-206ENST00000536429 APOBEC3GQ9HC16 384 aaKnown RBP14.08□□□□□ -0.16
PRKDC-206ENST00000536429 GDE1Q9NZC3 331 aa14.08□□□□□ -0.16
PRKDC-206ENST00000536429 CDH9Q9ULB4 789 aa14.08□□□□□ -0.16
PRKDC-206ENST00000536429 NCANO14594 1321 aa14.08□□□□□ -0.16
PRKDC-206ENST00000536429 CETN3O15182 167 aa14.07□□□□□ -0.16
PRKDC-206ENST00000536429 MICAL2O94851 1124 aa14.07□□□□□ -0.16
PRKDC-206ENST00000536429 CLSTN1O94985 981 aa14.07□□□□□ -0.16
PRKDC-206ENST00000536429 KRT13P13646 458 aa14.07□□□□□ -0.16
PRKDC-206ENST00000536429 HMGA1P17096 107 aaKnown RBP14.07□□□□□ -0.16
PRKDC-206ENST00000536429 PIK3CAP42336 1068 aa14.07□□□□□ -0.16
PRKDC-206ENST00000536429 VCPP55072 806 aaKnown RBP14.07□□□□□ -0.16
PRKDC-206ENST00000536429 MCCD1P59942 119 aaPredicted RBP14.07□□□□□ -0.16
PRKDC-206ENST00000536429 ZNF667Q5HYK9 610 aa14.07□□□□□ -0.16
PRKDC-206ENST00000536429 MDH1BQ5I0G3 518 aa14.07□□□□□ -0.16
PRKDC-206ENST00000536429 BMP8AQ7Z5Y6 402 aa14.07□□□□□ -0.16
PRKDC-206ENST00000536429 SPATA2LQ8IUW3 424 aaPredicted RBP14.07□□□□□ -0.16
PRKDC-206ENST00000536429 GPIHBP1Q8IV16 184 aa14.07□□□□□ -0.16
PRKDC-206ENST00000536429 NXPE3Q969Y0 559 aa14.07□□□□□ -0.16
PRKDC-206ENST00000536429 ASB16Q96NS5 453 aa14.07□□□□□ -0.16
PRKDC-206ENST00000536429 DUSP9Q99956 384 aaKnown RBP14.07□□□□□ -0.16
PRKDC-206ENST00000536429 MKNK1Q9BUB5 465 aa14.07□□□□□ -0.16
PRKDC-206ENST00000536429 SNX25Q9H3E2 840 aa14.07□□□□□ -0.16
PRKDC-206ENST00000536429 HMGXB4Q9UGU5 601 aa14.07□□□□□ -0.16
PRKDC-206ENST00000536429 ASB3Q9Y575 518 aa14.07□□□□□ -0.16
PRKDC-206ENST00000536429 KRBA1A5PL33 1030 aa14.06□□□□□ -0.16
PRKDC-206ENST00000536429 A8MXQ7 604 aa14.06□□□□□ -0.16
PRKDC-206ENST00000536429 ASS1P00966 412 aaKnown RBP14.06□□□□□ -0.16
PRKDC-206ENST00000536429 EPB41P11171 864 aaKnown RBP14.06□□□□□ -0.16
PRKDC-206ENST00000536429 SRFP11831 508 aa14.06□□□□□ -0.16
PRKDC-206ENST00000536429 BDNFP23560 247 aa14.06□□□□□ -0.16
PRKDC-206ENST00000536429 CCNE1P24864 410 aa14.06□□□□□ -0.16
PRKDC-206ENST00000536429 GABRR2P28476 465 aa14.06□□□□□ -0.16
PRKDC-206ENST00000536429 VIPR2P41587 438 aa14.06□□□□□ -0.16
PRKDC-206ENST00000536429 ASPAP45381 313 aa14.06□□□□□ -0.16
PRKDC-206ENST00000536429 CACNA2D1P54289 1103 aa14.06□□□□□ -0.16
PRKDC-206ENST00000536429 GPC5P78333 572 aa14.06□□□□□ -0.16
PRKDC-206ENST00000536429 CYP4F8P98187 520 aa14.06□□□□□ -0.16
PRKDC-206ENST00000536429 FKBP3Q00688 224 aaKnown RBP14.06□□□□□ -0.16
PRKDC-206ENST00000536429 ORC1Q13415 861 aa14.06□□□□□ -0.16
PRKDC-206ENST00000536429 MTSS1LQ765P7 747 aa14.06□□□□□ -0.16
PRKDC-206ENST00000536429 TMEM150AQ86TG1 271 aa14.06□□□□□ -0.16
PRKDC-206ENST00000536429 ITIH5Q86UX2 942 aa14.06□□□□□ -0.16
PRKDC-206ENST00000536429 SCN4BQ8IWT1 228 aa14.06□□□□□ -0.16
PRKDC-206ENST00000536429 LEMD2Q8NC56 503 aa14.06□□□□□ -0.16
PRKDC-206ENST00000536429 MYCBPAPQ8TBZ2 947 aa14.06□□□□□ -0.16
PRKDC-206ENST00000536429 SEMA4DQ92854 862 aa14.06□□□□□ -0.16
PRKDC-206ENST00000536429 RSPRY1Q96DX4 576 aa14.06□□□□□ -0.16
PRKDC-206ENST00000536429 PCED1BQ96HM7 432 aa14.06□□□□□ -0.16
PRKDC-206ENST00000536429 TSG101Q99816 390 aa14.06□□□□□ -0.16
PRKDC-206ENST00000536429 ATXN3LQ9H3M9 355 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms