RNA–Protein interactions for RNA: ENST00000535504.1

SSPN-204, Transcript of sarcospan, humanhuman

TSL 1 (best) BASIC

Gene SSPN, Length 419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-204ENST00000535504 HAPLN1P10915 354 aaPredicted RBP23.34■■□□□ 1.33
SSPN-204ENST00000535504 MYL4P12829 197 aa23.34■■□□□ 1.33
SSPN-204ENST00000535504 NLRP12P59046 1061 aa23.34■■□□□ 1.33
SSPN-204ENST00000535504 CYP27A1Q02318 531 aa23.34■■□□□ 1.33
SSPN-204ENST00000535504 C1orf220Q5T0J3 134 aa23.34■■□□□ 1.33
SSPN-204ENST00000535504 SCARA3Q6AZY7 606 aa23.34■■□□□ 1.33
SSPN-204ENST00000535504 MTSS1LQ765P7 747 aa23.34■■□□□ 1.33
SSPN-204ENST00000535504 LIMS2Q7Z4I7 341 aa23.34■■□□□ 1.33
SSPN-204ENST00000535504 LRRTM3Q86VH5 581 aa23.34■■□□□ 1.33
SSPN-204ENST00000535504 FAM114A1Q8IWE2 563 aa23.34■■□□□ 1.33
SSPN-204ENST00000535504 TAS1R2Q8TE23 839 aa23.34■■□□□ 1.33
SSPN-204ENST00000535504 NXPE3Q969Y0 559 aa23.34■■□□□ 1.33
SSPN-204ENST00000535504 C1QTNF1Q9BXJ1 281 aa23.34■■□□□ 1.33
SSPN-204ENST00000535504 NIF3L1Q9GZT8 377 aa23.34■■□□□ 1.33
SSPN-204ENST00000535504 SMYD3Q9H7B4 428 aa23.34■■□□□ 1.33
SSPN-204ENST00000535504 CYP3A43Q9HB55 503 aa23.34■■□□□ 1.33
SSPN-204ENST00000535504 HCFC1R1Q9NWW0 138 aa23.34■■□□□ 1.33
SSPN-204ENST00000535504 RAB20Q9NX57 234 aa23.34■■□□□ 1.33
SSPN-204ENST00000535504 LIMD1Q9UGP4 676 aa23.34■■□□□ 1.33
SSPN-204ENST00000535504 MUTYHQ9UIF7 546 aa23.34■■□□□ 1.33
SSPN-204ENST00000535504 PTMSP20962 102 aa23.33■■□□□ 1.33
SSPN-204ENST00000535504 PSMC1P62191 440 aaKnown RBP23.33■■□□□ 1.33
SSPN-204ENST00000535504 NTHL1P78549 312 aa23.33■■□□□ 1.33
SSPN-204ENST00000535504 MTMR3Q13615 1198 aa23.33■■□□□ 1.33
SSPN-204ENST00000535504 SASS6Q6UVJ0 657 aa23.33■■□□□ 1.33
SSPN-204ENST00000535504 FAXDC2Q96IV6 333 aa23.33■■□□□ 1.33
SSPN-204ENST00000535504 DUSP9Q99956 384 aaKnown RBP23.33■■□□□ 1.33
SSPN-204ENST00000535504 EPS15L1Q9UBC2 864 aa23.33■■□□□ 1.33
SSPN-204ENST00000535504 SPTBN5Q9NRC6 3674 aaKnown RBP23.32■■□□□ 1.32
SSPN-204ENST00000535504 CSH1P0DML2 217 aa23.32■■□□□ 1.32
SSPN-204ENST00000535504 CSH2P0DML3 217 aa23.32■■□□□ 1.32
SSPN-204ENST00000535504 LMO2P25791 158 aa23.32■■□□□ 1.32
SSPN-204ENST00000535504 YWHAEP62258 255 aaKnown RBP23.32■■□□□ 1.32
SSPN-204ENST00000535504 PTPN21Q16825 1174 aa23.32■■□□□ 1.32
SSPN-204ENST00000535504 CFAP221Q4G0U5 840 aa23.32■■□□□ 1.32
SSPN-204ENST00000535504 ARHGAP15Q53QZ3 475 aa23.32■■□□□ 1.32
SSPN-204ENST00000535504 CT47A1Q5JQC4 288 aaPredicted RBP23.32■■□□□ 1.32
SSPN-204ENST00000535504 UNC93AQ86WB7 457 aa23.32■■□□□ 1.32
SSPN-204ENST00000535504 SCN4BQ8IWT1 228 aa23.32■■□□□ 1.32
SSPN-204ENST00000535504 MYCBPAPQ8TBZ2 947 aa23.32■■□□□ 1.32
SSPN-204ENST00000535504 GPT2Q8TD30 523 aa23.32■■□□□ 1.32
SSPN-204ENST00000535504 PSMG2Q969U7 264 aa23.32■■□□□ 1.32
SSPN-204ENST00000535504 SLITRK6Q9H5Y7 841 aa23.32■■□□□ 1.32
SSPN-204ENST00000535504 GDE1Q9NZC3 331 aa23.32■■□□□ 1.32
SSPN-204ENST00000535504 EHD2Q9NZN4 543 aa23.32■■□□□ 1.32
SSPN-204ENST00000535504 CEP72Q9P209 647 aa23.32■■□□□ 1.32
SSPN-204ENST00000535504 SORCS3Q9UPU3 1222 aa23.32■■□□□ 1.32
SSPN-204ENST00000535504 UTP18Q9Y5J1 556 aaKnown RBP eCLIP23.32■■□□□ 1.32
SSPN-204ENST00000535504 PI4K2BG5E9Z4 385 aa23.31■■□□□ 1.32
SSPN-204ENST00000535504 TRIM66O15016 1216 aa23.31■■□□□ 1.32
SSPN-204ENST00000535504 MICAL2O94851 1124 aa23.31■■□□□ 1.32
SSPN-204ENST00000535504 LAMP2P13473 410 aa23.31■■□□□ 1.32
SSPN-204ENST00000535504 PTPN1P18031 435 aaKnown RBP23.31■■□□□ 1.32
SSPN-204ENST00000535504 ERCC5P28715 1186 aaPredicted RBP23.31■■□□□ 1.32
SSPN-204ENST00000535504 MCCD1P59942 119 aaPredicted RBP23.31■■□□□ 1.32
SSPN-204ENST00000535504 MDH1BQ5I0G3 518 aa23.31■■□□□ 1.32
SSPN-204ENST00000535504 CCDC183Q5T5S1 534 aa23.31■■□□□ 1.32
SSPN-204ENST00000535504 FAM171BQ6P995 826 aa23.31■■□□□ 1.32
SSPN-204ENST00000535504 VSTM1Q6UX27 236 aa23.31■■□□□ 1.32
SSPN-204ENST00000535504 B3GALNT2Q8NCR0 500 aa23.31■■□□□ 1.32
SSPN-204ENST00000535504 FEZF2Q8TBJ5 459 aa23.31■■□□□ 1.32
SSPN-204ENST00000535504 FGF13Q92913 245 aa23.31■■□□□ 1.32
SSPN-204ENST00000535504 MYLPFQ96A32 169 aa23.31■■□□□ 1.32
SSPN-204ENST00000535504 MYADMQ96S97 322 aa23.31■■□□□ 1.32
SSPN-204ENST00000535504 MED10Q9BTT4 135 aa23.31■■□□□ 1.32
SSPN-204ENST00000535504 GPR88Q9GZN0 384 aa23.31■■□□□ 1.32
SSPN-204ENST00000535504 ELOVL4Q9GZR5 314 aa23.31■■□□□ 1.32
SSPN-204ENST00000535504 CRISPLD1Q9H336 500 aa23.31■■□□□ 1.32
SSPN-204ENST00000535504 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.31■■□□□ 1.32
SSPN-204ENST00000535504 UXTQ9UBK9 157 aaPredicted RBP23.31■■□□□ 1.32
SSPN-204ENST00000535504 MYBPHLA2RUH7 354 aa23.3■■□□□ 1.32
SSPN-204ENST00000535504 P4HA2O15460 535 aa23.3■■□□□ 1.32
SSPN-204ENST00000535504 VNN2O95498 520 aa23.3■■□□□ 1.32
SSPN-204ENST00000535504 CDC25CP30307 473 aa23.3■■□□□ 1.32
SSPN-204ENST00000535504 GRIK1P39086 918 aa23.3■■□□□ 1.32
SSPN-204ENST00000535504 MAGEA11P43364 429 aa23.3■■□□□ 1.32
SSPN-204ENST00000535504 RAP1GAPP47736 663 aa23.3■■□□□ 1.32
SSPN-204ENST00000535504 SPOPLQ6IQ16 392 aa23.3■■□□□ 1.32
SSPN-204ENST00000535504 DNAJB7Q7Z6W7 309 aaPredicted RBP23.3■■□□□ 1.32
SSPN-204ENST00000535504 UBALD2Q8IYN6 164 aa23.3■■□□□ 1.32
SSPN-204ENST00000535504 TTC9BQ8N6N2 239 aa23.3■■□□□ 1.32
SSPN-204ENST00000535504 GIPC2Q8TF65 315 aa23.3■■□□□ 1.32
SSPN-204ENST00000535504 ING5Q8WYH8 240 aa23.3■■□□□ 1.32
SSPN-204ENST00000535504 SLC35C1Q96A29 364 aa23.3■■□□□ 1.32
SSPN-204ENST00000535504 TMLHEQ9NVH6 421 aa23.3■■□□□ 1.32
SSPN-204ENST00000535504 SOAT2O75908 522 aa23.29■■□□□ 1.32
SSPN-204ENST00000535504 CYP2F1P24903 491 aa23.29■■□□□ 1.32
SSPN-204ENST00000535504 FMO5P49326 533 aa23.29■■□□□ 1.32
SSPN-204ENST00000535504 CDR1P51861 262 aa23.29■■□□□ 1.32
SSPN-204ENST00000535504 CDH8P55286 799 aa23.29■■□□□ 1.32
SSPN-204ENST00000535504 ITFG1Q8TB96 612 aa23.29■■□□□ 1.32
SSPN-204ENST00000535504 CEP295NLQ96MC4 621 aa23.29■■□□□ 1.32
SSPN-204ENST00000535504 LPIN3Q9BQK8 851 aa23.29■■□□□ 1.32
SSPN-204ENST00000535504 ATXN3LQ9H3M9 355 aa23.29■■□□□ 1.32
SSPN-204ENST00000535504 FAM124BQ9H5Z6 455 aaPredicted RBP23.29■■□□□ 1.32
SSPN-204ENST00000535504 ATP2C2O75185 946 aa23.28■■□□□ 1.32
SSPN-204ENST00000535504 AFPP02771 609 aaKnown RBP23.28■■□□□ 1.32
SSPN-204ENST00000535504 BDNFP23560 247 aa23.28■■□□□ 1.32
SSPN-204ENST00000535504 TBXAS1P24557 533 aaPredicted RBP23.28■■□□□ 1.32
SSPN-204ENST00000535504 ASPAP45381 313 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms