RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 MUC3AQ02505 3323 aa24.27■■□□□ 1.48
SFSWAP-204ENST00000535399 DLL1O00548 723 aa24.27■■□□□ 1.48
SFSWAP-204ENST00000535399 RHOP08100 348 aa24.27■■□□□ 1.48
SFSWAP-204ENST00000535399 CCDC192P0DO97 292 aa24.27■■□□□ 1.48
SFSWAP-204ENST00000535399 FSHRP23945 695 aa24.27■■□□□ 1.48
SFSWAP-204ENST00000535399 ALDH1A3P47895 512 aa24.27■■□□□ 1.48
SFSWAP-204ENST00000535399 FMO5P49326 533 aa24.27■■□□□ 1.48
SFSWAP-204ENST00000535399 PLD1Q13393 1074 aa24.27■■□□□ 1.48
SFSWAP-204ENST00000535399 MGAT5BQ3V5L5 792 aa24.27■■□□□ 1.48
SFSWAP-204ENST00000535399 PABPC1LQ4VXU2 614 aaKnown RBP24.27■■□□□ 1.48
SFSWAP-204ENST00000535399 OTOP3Q7RTS5 596 aa24.27■■□□□ 1.48
SFSWAP-204ENST00000535399 TDRD5Q8NAT2 981 aaKnown RBP24.27■■□□□ 1.48
SFSWAP-204ENST00000535399 MYADMQ96S97 322 aa24.27■■□□□ 1.48
SFSWAP-204ENST00000535399 SEPT5Q99719 369 aaPredicted RBP24.27■■□□□ 1.48
SFSWAP-204ENST00000535399 DPEP3Q9H4B8 488 aa24.27■■□□□ 1.48
SFSWAP-204ENST00000535399 ABCB6Q9NP58 842 aa24.27■■□□□ 1.48
SFSWAP-204ENST00000535399 AVENQ9NQS1 362 aaPredicted RBP24.27■■□□□ 1.48
SFSWAP-204ENST00000535399 C2orf16Q68DN1 1984 aa24.27■■□□□ 1.48
SFSWAP-204ENST00000535399 A8MXQ7 604 aa24.26■■□□□ 1.47
SFSWAP-204ENST00000535399 TNFRSF10AO00220 468 aa24.26■■□□□ 1.47
SFSWAP-204ENST00000535399 PTPN2P17706 415 aa24.26■■□□□ 1.47
SFSWAP-204ENST00000535399 EPHB3P54753 998 aa24.26■■□□□ 1.47
SFSWAP-204ENST00000535399 ZDHHC14Q8IZN3 488 aa24.26■■□□□ 1.47
SFSWAP-204ENST00000535399 ELMOD1Q8N336 334 aa24.26■■□□□ 1.47
SFSWAP-204ENST00000535399 CCDC150Q8NCX0 1101 aa24.26■■□□□ 1.47
SFSWAP-204ENST00000535399 ITFG1Q8TB96 612 aa24.26■■□□□ 1.47
SFSWAP-204ENST00000535399 MYLPFQ96A32 169 aa24.26■■□□□ 1.47
SFSWAP-204ENST00000535399 FAXDC2Q96IV6 333 aa24.26■■□□□ 1.47
SFSWAP-204ENST00000535399 CNOT6LQ96LI5 555 aaKnown RBP24.26■■□□□ 1.47
SFSWAP-204ENST00000535399 ZNF512Q96ME7 567 aaPredicted RBP24.26■■□□□ 1.47
SFSWAP-204ENST00000535399 LPIN3Q9BQK8 851 aa24.26■■□□□ 1.47
SFSWAP-204ENST00000535399 CORO1BQ9BR76 489 aa24.26■■□□□ 1.47
SFSWAP-204ENST00000535399 CYP3A43Q9HB55 503 aa24.26■■□□□ 1.47
SFSWAP-204ENST00000535399 PTPN1P18031 435 aaKnown RBP24.25■■□□□ 1.47
SFSWAP-204ENST00000535399 ATF6P18850 670 aa24.25■■□□□ 1.47
SFSWAP-204ENST00000535399 CYP2F1P24903 491 aa24.25■■□□□ 1.47
SFSWAP-204ENST00000535399 MAPRE1Q15691 268 aaKnown RBP24.25■■□□□ 1.47
SFSWAP-204ENST00000535399 CFAP221Q4G0U5 840 aa24.25■■□□□ 1.47
SFSWAP-204ENST00000535399 SASS6Q6UVJ0 657 aa24.25■■□□□ 1.47
SFSWAP-204ENST00000535399 GET4Q7L5D6 327 aaPredicted RBP24.25■■□□□ 1.47
SFSWAP-204ENST00000535399 SPATA2LQ8IUW3 424 aaPredicted RBP24.25■■□□□ 1.47
SFSWAP-204ENST00000535399 HS6ST3Q8IZP7 471 aa24.25■■□□□ 1.47
SFSWAP-204ENST00000535399 B3GALNT2Q8NCR0 500 aa24.25■■□□□ 1.47
SFSWAP-204ENST00000535399 MYCBPAPQ8TBZ2 947 aa24.25■■□□□ 1.47
SFSWAP-204ENST00000535399 TATDN2Q93075 761 aa24.25■■□□□ 1.47
SFSWAP-204ENST00000535399 FUBP3Q96I24 572 aaKnown RBP eCLIP24.25■■□□□ 1.47
SFSWAP-204ENST00000535399 THAP9Q9H5L6 903 aa24.25■■□□□ 1.47
SFSWAP-204ENST00000535399 UTP18Q9Y5J1 556 aaKnown RBP eCLIP24.25■■□□□ 1.47
SFSWAP-204ENST00000535399 DENND4AQ7Z401 1863 aa24.24■■□□□ 1.47
SFSWAP-204ENST00000535399 P4HA2O15460 535 aa24.24■■□□□ 1.47
SFSWAP-204ENST00000535399 EPHA5P54756 1037 aa24.24■■□□□ 1.47
SFSWAP-204ENST00000535399 INCA1Q0VD86 236 aa24.24■■□□□ 1.47
SFSWAP-204ENST00000535399 KCNH2Q12809 1159 aa24.24■■□□□ 1.47
SFSWAP-204ENST00000535399 TPD52L1Q16890 204 aaPredicted RBP24.24■■□□□ 1.47
SFSWAP-204ENST00000535399 SLC5A9Q2M3M2 681 aa24.24■■□□□ 1.47
SFSWAP-204ENST00000535399 MDH1BQ5I0G3 518 aa24.24■■□□□ 1.47
SFSWAP-204ENST00000535399 WDR44Q5JSH3 913 aa24.24■■□□□ 1.47
SFSWAP-204ENST00000535399 PRSS36Q5K4E3 855 aa24.24■■□□□ 1.47
SFSWAP-204ENST00000535399 IQCEQ6IPM2 695 aa24.24■■□□□ 1.47
SFSWAP-204ENST00000535399 CAVIN1Q6NZI2 390 aaKnown RBP24.24■■□□□ 1.47
SFSWAP-204ENST00000535399 C4orf50Q6ZRC1 276 aa24.24■■□□□ 1.47
SFSWAP-204ENST00000535399 RNF135Q8IUD6 432 aa24.24■■□□□ 1.47
SFSWAP-204ENST00000535399 KHSRPQ92945 711 aaKnown RBP eCLIP24.24■■□□□ 1.475e-9■■□□□ 14.1
SFSWAP-204ENST00000535399 ACSF2Q96CM8 615 aaPredicted RBP24.24■■□□□ 1.47
SFSWAP-204ENST00000535399 PCED1BQ96HM7 432 aa24.24■■□□□ 1.47
SFSWAP-204ENST00000535399 LRRC3Q9BY71 257 aa24.24■■□□□ 1.47
SFSWAP-204ENST00000535399 ANO10Q9NW15 660 aa24.24■■□□□ 1.47
SFSWAP-204ENST00000535399 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP24.24■■□□□ 1.47
SFSWAP-204ENST00000535399 HMGXB4Q9UGU5 601 aa24.24■■□□□ 1.47
SFSWAP-204ENST00000535399 ASB3Q9Y575 518 aa24.24■■□□□ 1.47
SFSWAP-204ENST00000535399 NRG2O14511 850 aaPredicted RBP24.23■■□□□ 1.47
SFSWAP-204ENST00000535399 AFPP02771 609 aaKnown RBP24.23■■□□□ 1.47
SFSWAP-204ENST00000535399 CCR2P41597 374 aa24.23■■□□□ 1.47
SFSWAP-204ENST00000535399 MAGEA11P43364 429 aa24.23■■□□□ 1.47
SFSWAP-204ENST00000535399 GPR15P49685 360 aa24.23■■□□□ 1.47
SFSWAP-204ENST00000535399 NDST1P52848 882 aa24.23■■□□□ 1.47
SFSWAP-204ENST00000535399 DNAJB7Q7Z6W7 309 aaPredicted RBP24.23■■□□□ 1.47
SFSWAP-204ENST00000535399 UNC93AQ86WB7 457 aa24.23■■□□□ 1.47
SFSWAP-204ENST00000535399 TMC8Q8IU68 726 aa24.23■■□□□ 1.47
SFSWAP-204ENST00000535399 PLCD3Q8N3E9 789 aa24.23■■□□□ 1.47
SFSWAP-204ENST00000535399 PSMG2Q969U7 264 aa24.23■■□□□ 1.47
SFSWAP-204ENST00000535399 EPS15L1Q9UBC2 864 aa24.23■■□□□ 1.47
SFSWAP-204ENST00000535399 MAGEC2Q9UBF1 373 aaPredicted RBP24.23■■□□□ 1.47
SFSWAP-204ENST00000535399 DOCK6Q96HP0 2047 aa24.23■■□□□ 1.47
SFSWAP-204ENST00000535399 GBP2P32456 591 aaPredicted RBP24.22■■□□□ 1.47
SFSWAP-204ENST00000535399 STX1AQ16623 288 aa24.22■■□□□ 1.47
SFSWAP-204ENST00000535399 LMO3Q8TAP4 145 aa24.22■■□□□ 1.47
SFSWAP-204ENST00000535399 ENOX1Q8TC92 643 aaKnown RBP24.22■■□□□ 1.47
SFSWAP-204ENST00000535399 GIPC2Q8TF65 315 aa24.22■■□□□ 1.47
SFSWAP-204ENST00000535399 TCEAL4Q96EI5 215 aa24.22■■□□□ 1.47
SFSWAP-204ENST00000535399 ASAH2Q9NR71 780 aa24.22■■□□□ 1.47
SFSWAP-204ENST00000535399 LIMD1Q9UGP4 676 aa24.22■■□□□ 1.47
SFSWAP-204ENST00000535399 CDH7Q9ULB5 785 aa24.22■■□□□ 1.47
SFSWAP-204ENST00000535399 MRPS23Q9Y3D9 190 aaKnown RBP24.22■■□□□ 1.47
SFSWAP-204ENST00000535399 MOSPD3O75425 235 aa24.21■■□□□ 1.47
SFSWAP-204ENST00000535399 CYP27A1Q02318 531 aa24.21■■□□□ 1.47
SFSWAP-204ENST00000535399 ORC1Q13415 861 aa24.21■■□□□ 1.47
SFSWAP-204ENST00000535399 DDR2Q16832 855 aa24.21■■□□□ 1.47
SFSWAP-204ENST00000535399 KLHL40Q2TBA0 621 aa24.21■■□□□ 1.47
SFSWAP-204ENST00000535399 CYP4A22Q5TCH4 519 aa24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms