RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 PLD1Q13393 1074 aa10.86□□□□□ -0.67
CLSTN3-203ENST00000534830 LRRC32Q14392 662 aa10.86□□□□□ -0.67
CLSTN3-203ENST00000534830 SCARA3Q6AZY7 606 aa10.86□□□□□ -0.67
CLSTN3-203ENST00000534830 VITQ6UXI7 678 aa10.86□□□□□ -0.67
CLSTN3-203ENST00000534830 Q6ZS52 159 aa10.86□□□□□ -0.67
CLSTN3-203ENST00000534830 GAREM2Q75VX8 874 aa10.86□□□□□ -0.67
CLSTN3-203ENST00000534830 LRRTM3Q86VH5 581 aa10.86□□□□□ -0.67
CLSTN3-203ENST00000534830 BRSK2Q8IWQ3 736 aa10.86□□□□□ -0.67
CLSTN3-203ENST00000534830 TTC9BQ8N6N2 239 aa10.86□□□□□ -0.67
CLSTN3-203ENST00000534830 ATAD1Q8NBU5 361 aa10.86□□□□□ -0.67
CLSTN3-203ENST00000534830 SHKBP1Q8TBC3 707 aa10.86□□□□□ -0.67
CLSTN3-203ENST00000534830 ZCCHC14Q8WYQ9 949 aaKnown RBP10.86□□□□□ -0.67
CLSTN3-203ENST00000534830 PSMG2Q969U7 264 aa10.86□□□□□ -0.67
CLSTN3-203ENST00000534830 LOXL4Q96JB6 756 aa10.86□□□□□ -0.67
CLSTN3-203ENST00000534830 MKNK1Q9BUB5 465 aa10.86□□□□□ -0.67
CLSTN3-203ENST00000534830 GPR88Q9GZN0 384 aa10.86□□□□□ -0.67
CLSTN3-203ENST00000534830 TNMDQ9H2S6 317 aa10.86□□□□□ -0.67
CLSTN3-203ENST00000534830 ASAH2Q9NR71 780 aa10.86□□□□□ -0.67
CLSTN3-203ENST00000534830 DSEQ9UL01 958 aa10.86□□□□□ -0.67
CLSTN3-203ENST00000534830 ASB3Q9Y575 518 aa10.86□□□□□ -0.67
CLSTN3-203ENST00000534830 KIF26AQ9ULI4 1882 aaPredicted RBP10.86□□□□□ -0.67
CLSTN3-203ENST00000534830 ZNF638Q14966 1978 aaKnown RBP10.85□□□□□ -0.67
CLSTN3-203ENST00000534830 KPNA7A9QM74 516 aa10.85□□□□□ -0.67
CLSTN3-203ENST00000534830 ARNTLO00327 626 aa10.85□□□□□ -0.67
CLSTN3-203ENST00000534830 ZNF263O14978 683 aa10.85□□□□□ -0.67
CLSTN3-203ENST00000534830 EXTL3O43909 919 aa10.85□□□□□ -0.67
CLSTN3-203ENST00000534830 PRPF6O94906 941 aaKnown RBP10.85□□□□□ -0.67
CLSTN3-203ENST00000534830 EPN2O95208 641 aa10.85□□□□□ -0.67
CLSTN3-203ENST00000534830 PAPSS2O95340 614 aaPredicted RBP10.85□□□□□ -0.67
CLSTN3-203ENST00000534830 TOP3BO95985 862 aaKnown RBP10.85□□□□□ -0.67
CLSTN3-203ENST00000534830 PDIA4P13667 645 aaKnown RBP10.85□□□□□ -0.67
CLSTN3-203ENST00000534830 IDEP14735 1019 aa10.85□□□□□ -0.67
CLSTN3-203ENST00000534830 GJA1P17302 382 aa10.85□□□□□ -0.67
CLSTN3-203ENST00000534830 PSMC3P17980 439 aa10.85□□□□□ -0.67
CLSTN3-203ENST00000534830 HOXD13P35453 343 aa10.85□□□□□ -0.67
CLSTN3-203ENST00000534830 EHHADHQ08426 723 aa10.85□□□□□ -0.67
CLSTN3-203ENST00000534830 SMARCB1Q12824 385 aa10.85□□□□□ -0.67
CLSTN3-203ENST00000534830 STK38Q15208 465 aa10.85□□□□□ -0.67
CLSTN3-203ENST00000534830 TEAD2Q15562 447 aa10.85□□□□□ -0.67
CLSTN3-203ENST00000534830 WSCD1Q658N2 575 aa10.85□□□□□ -0.67
CLSTN3-203ENST00000534830 ARMCX5Q6P1M9 558 aa10.85□□□□□ -0.67
CLSTN3-203ENST00000534830 SHC4Q6S5L8 630 aa10.85□□□□□ -0.67
CLSTN3-203ENST00000534830 CACNA2D4Q7Z3S7 1137 aa10.85□□□□□ -0.67
CLSTN3-203ENST00000534830 DNAJB7Q7Z6W7 309 aaPredicted RBP10.85□□□□□ -0.67
CLSTN3-203ENST00000534830 KBTBD6Q86V97 674 aa10.85□□□□□ -0.67
CLSTN3-203ENST00000534830 WDR5BQ86VZ2 330 aa10.85□□□□□ -0.67
CLSTN3-203ENST00000534830 MFSD6LQ8IWD5 586 aa10.85□□□□□ -0.67
CLSTN3-203ENST00000534830 PDILTQ8N807 584 aa10.85□□□□□ -0.67
CLSTN3-203ENST00000534830 C1orf127Q8N9H9 656 aa10.85□□□□□ -0.67
CLSTN3-203ENST00000534830 GLIS3Q8NEA6 775 aa10.85□□□□□ -0.67
CLSTN3-203ENST00000534830 SMARCD2Q92925 531 aa10.85□□□□□ -0.67
CLSTN3-203ENST00000534830 SAAL1Q96ER3 474 aa10.85□□□□□ -0.67
CLSTN3-203ENST00000534830 ZNF396Q96N95 335 aaPredicted RBP10.85□□□□□ -0.67
CLSTN3-203ENST00000534830 PYM1Q9BRP8 204 aaKnown RBP10.85□□□□□ -0.67
CLSTN3-203ENST00000534830 CBWD1Q9BRT8 395 aa10.85□□□□□ -0.67
CLSTN3-203ENST00000534830 FAM213AQ9BRX8 229 aa10.85□□□□□ -0.67
CLSTN3-203ENST00000534830 TMEM121BQ9BXQ6 578 aaPredicted RBP10.85□□□□□ -0.67
CLSTN3-203ENST00000534830 TRIM9Q9C026 710 aa10.85□□□□□ -0.67
CLSTN3-203ENST00000534830 CUEDC2Q9H467 287 aa10.85□□□□□ -0.67
CLSTN3-203ENST00000534830 TMEM206Q9H813 350 aa10.85□□□□□ -0.67
CLSTN3-203ENST00000534830 C2orf42Q9NWW7 574 aa10.85□□□□□ -0.67
CLSTN3-203ENST00000534830 TFIP11Q9UBB9 837 aaKnown RBP10.85□□□□□ -0.67
CLSTN3-203ENST00000534830 SLC27A5Q9Y2P5 690 aa10.85□□□□□ -0.67
CLSTN3-203ENST00000534830 ANAPC1Q9H1A4 1944 aa10.85□□□□□ -0.67
CLSTN3-203ENST00000534830 SETXQ7Z333 2677 aaKnown RBP10.85□□□□□ -0.67
CLSTN3-203ENST00000534830 WDFY3Q8IZQ1 3526 aa10.85□□□□□ -0.67
CLSTN3-203ENST00000534830 LAMA1P25391 3075 aa10.85□□□□□ -0.67
CLSTN3-203ENST00000534830 PTPRDP23468 1912 aa10.84□□□□□ -0.67
CLSTN3-203ENST00000534830 KIAA0391O15091 583 aaKnown RBP10.84□□□□□ -0.67
CLSTN3-203ENST00000534830 CUTAO60888 179 aa10.84□□□□□ -0.67
CLSTN3-203ENST00000534830 RPP40O75818 363 aaKnown RBP10.84□□□□□ -0.67
CLSTN3-203ENST00000534830 SOAT2O75908 522 aa10.84□□□□□ -0.67
CLSTN3-203ENST00000534830 CCDC192P0DO97 292 aa10.84□□□□□ -0.67
CLSTN3-203ENST00000534830 MYL4P12829 197 aa10.84□□□□□ -0.67
CLSTN3-203ENST00000534830 WEE1P30291 646 aa10.84□□□□□ -0.67
CLSTN3-203ENST00000534830 MPLP40238 635 aa10.84□□□□□ -0.67
CLSTN3-203ENST00000534830 VIPR2P41587 438 aa10.84□□□□□ -0.67
CLSTN3-203ENST00000534830 ALDH1A3P47895 512 aa10.84□□□□□ -0.67
CLSTN3-203ENST00000534830 PXNP49023 591 aaPredicted RBP10.84□□□□□ -0.67
CLSTN3-203ENST00000534830 TUFMP49411 452 aaKnown RBP10.84□□□□□ -0.67
CLSTN3-203ENST00000534830 KPNA1P52294 538 aaPredicted RBP10.84□□□□□ -0.67
CLSTN3-203ENST00000534830 EPHB3P54753 998 aa10.84□□□□□ -0.67
CLSTN3-203ENST00000534830 SV2CQ496J9 727 aa10.84□□□□□ -0.67
CLSTN3-203ENST00000534830 SLC39A12Q504Y0 691 aa10.84□□□□□ -0.67
CLSTN3-203ENST00000534830 TCEAL6Q6IPX3 200 aa10.84□□□□□ -0.67
CLSTN3-203ENST00000534830 EPM2AIP1Q7L775 607 aaPredicted RBP10.84□□□□□ -0.67
CLSTN3-203ENST00000534830 LIMS2Q7Z4I7 341 aa10.84□□□□□ -0.67
CLSTN3-203ENST00000534830 CCDC65Q8IXS2 484 aa10.84□□□□□ -0.67
CLSTN3-203ENST00000534830 ZSCAN18Q8TBC5 510 aaPredicted RBP10.84□□□□□ -0.67
CLSTN3-203ENST00000534830 ZNF507Q8TCN5 953 aa10.84□□□□□ -0.67
CLSTN3-203ENST00000534830 CSGALNACT1Q8TDX6 532 aa10.84□□□□□ -0.67
CLSTN3-203ENST00000534830 C2orf15Q8WU43 125 aaKnown RBP10.84□□□□□ -0.67
CLSTN3-203ENST00000534830 DEPDC1BQ8WUY9 529 aa10.84□□□□□ -0.67
CLSTN3-203ENST00000534830 GAB3Q8WWW8 586 aa10.84□□□□□ -0.67
CLSTN3-203ENST00000534830 GATA6Q92908 595 aa10.84□□□□□ -0.67
CLSTN3-203ENST00000534830 TCEAL3Q969E4 200 aa10.84□□□□□ -0.67
CLSTN3-203ENST00000534830 RSPRY1Q96DX4 576 aa10.84□□□□□ -0.67
CLSTN3-203ENST00000534830 C7orf25Q9BPX7 421 aa10.84□□□□□ -0.67
CLSTN3-203ENST00000534830 SCNM1Q9BWG6 230 aa10.84□□□□□ -0.67
CLSTN3-203ENST00000534830 IL21Q9HBE4 155 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms