RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 XRCC5P13010 732 aaKnown RBP9.52□□□□□ -0.89
SF3B2-216ENST00000534765 SMPD1P17405 629 aa9.52□□□□□ -0.89
SF3B2-216ENST00000534765 TBL3Q12788 808 aaKnown RBP9.52□□□□□ -0.89
SF3B2-216ENST00000534765 RIPK1Q13546 671 aa9.52□□□□□ -0.89
SF3B2-216ENST00000534765 ZNF268Q14587 947 aaPredicted RBP9.52□□□□□ -0.89
SF3B2-216ENST00000534765 LLGL2Q6P1M3 1020 aa9.52□□□□□ -0.89
SF3B2-216ENST00000534765 CYP4X1Q8N118 509 aa9.52□□□□□ -0.89
SF3B2-216ENST00000534765 STK32AQ8WU08 396 aa9.52□□□□□ -0.89
SF3B2-216ENST00000534765 ANKEF1Q9NU02 776 aa9.52□□□□□ -0.89
SF3B2-216ENST00000534765 AMACRQ9UHK6 382 aa9.52□□□□□ -0.89
SF3B2-216ENST00000534765 TMCO1Q9UM00 188 aa9.52□□□□□ -0.89
SF3B2-216ENST00000534765 IQCA1LA6NCM1 817 aa9.51□□□□□ -0.89
SF3B2-216ENST00000534765 SMAPO00193 183 aa9.51□□□□□ -0.89
SF3B2-216ENST00000534765 PALMO75781 387 aa9.51□□□□□ -0.89
SF3B2-216ENST00000534765 KRT38O76015 456 aa9.51□□□□□ -0.89
SF3B2-216ENST00000534765 CLCN3P51790 818 aa9.51□□□□□ -0.89
SF3B2-216ENST00000534765 RAPGEF1Q13905 1077 aa9.51□□□□□ -0.89
SF3B2-216ENST00000534765 CNPY1Q3B7I2 92 aa9.51□□□□□ -0.89
SF3B2-216ENST00000534765 MARCH8Q5T0T0 291 aa9.51□□□□□ -0.89
SF3B2-216ENST00000534765 RASAL3Q86YV0 1011 aa9.51□□□□□ -0.89
SF3B2-216ENST00000534765 SAMD3Q8N6K7 520 aa9.51□□□□□ -0.89
SF3B2-216ENST00000534765 HIPK4Q8NE63 616 aa9.51□□□□□ -0.89
SF3B2-216ENST00000534765 NEK9Q8TD19 979 aa9.51□□□□□ -0.89
SF3B2-216ENST00000534765 CASP10Q92851 521 aa9.51□□□□□ -0.89
SF3B2-216ENST00000534765 TARS2Q9BW92 718 aaKnown RBP9.51□□□□□ -0.89
SF3B2-216ENST00000534765 FOXN3O00409 490 aaPredicted RBP9.51□□□□□ -0.89
SF3B2-216ENST00000534765 CALUO43852 315 aaPredicted RBP9.51□□□□□ -0.89
SF3B2-216ENST00000534765 TRPA1O75762 1119 aa9.51□□□□□ -0.89
SF3B2-216ENST00000534765 LCA5LO95447 670 aa9.51□□□□□ -0.89
SF3B2-216ENST00000534765 GNA14O95837 355 aa9.51□□□□□ -0.89
SF3B2-216ENST00000534765 ATP6V1B1P15313 513 aa9.51□□□□□ -0.89
SF3B2-216ENST00000534765 MTTPP55157 894 aa9.51□□□□□ -0.89
SF3B2-216ENST00000534765 EPC2Q52LR7 807 aa9.51□□□□□ -0.89
SF3B2-216ENST00000534765 IRGCQ6NXR0 463 aa9.51□□□□□ -0.89
SF3B2-216ENST00000534765 C1orf228Q6PIY5 440 aa9.51□□□□□ -0.89
SF3B2-216ENST00000534765 TAS1R2Q8TE23 839 aa9.51□□□□□ -0.89
SF3B2-216ENST00000534765 KMT5AQ9NQR1 393 aa9.51□□□□□ -0.89
SF3B2-216ENST00000534765 NMRK1Q9NWW6 199 aa9.51□□□□□ -0.89
SF3B2-216ENST00000534765 KCND2Q9NZV8 630 aa9.51□□□□□ -0.89
SF3B2-216ENST00000534765 FBXO40Q9UH90 709 aa9.51□□□□□ -0.89
SF3B2-216ENST00000534765 DDX3XO00571 662 aaKnown RBP eCLIP9.51□□□□□ -0.89
SF3B2-216ENST00000534765 EXOC3O60645 756 aa9.51□□□□□ -0.89
SF3B2-216ENST00000534765 FGFR1OPO95684 399 aaKnown RBP9.51□□□□□ -0.89
SF3B2-216ENST00000534765 GSTA2P09210 222 aa9.51□□□□□ -0.89
SF3B2-216ENST00000534765 TXNP10599 105 aaKnown RBP9.51□□□□□ -0.89
SF3B2-216ENST00000534765 KLRC1P26715 233 aa9.51□□□□□ -0.89
SF3B2-216ENST00000534765 VHLP40337 213 aa9.51□□□□□ -0.89
SF3B2-216ENST00000534765 STAT5BP51692 787 aa9.51□□□□□ -0.89
SF3B2-216ENST00000534765 EXOC3L4Q17RC7 722 aa9.51□□□□□ -0.89
SF3B2-216ENST00000534765 C6orf163Q5TEZ5 329 aa9.51□□□□□ -0.89
SF3B2-216ENST00000534765 XRRA1Q6P2D8 792 aa9.51□□□□□ -0.89
SF3B2-216ENST00000534765 METTL7BQ6UX53 244 aa9.51□□□□□ -0.89
SF3B2-216ENST00000534765 ZNF554Q86TJ5 538 aa9.51□□□□□ -0.89
SF3B2-216ENST00000534765 ZBTB8BQ8NAP8 495 aaPredicted RBP9.51□□□□□ -0.89
SF3B2-216ENST00000534765 SPATA33Q96N06 139 aa9.51□□□□□ -0.89
SF3B2-216ENST00000534765 CELF4Q9BZC1 486 aaKnown RBP9.51□□□□□ -0.89
SF3B2-216ENST00000534765 CDHR5Q9HBB8 845 aa9.51□□□□□ -0.89
SF3B2-216ENST00000534765 CEP72Q9P209 647 aa9.51□□□□□ -0.89
SF3B2-216ENST00000534765 GJD2Q9UKL4 321 aa9.51□□□□□ -0.89
SF3B2-216ENST00000534765 SPTLC1O15269 473 aa9.5□□□□□ -0.89
SF3B2-216ENST00000534765 S100BP04271 92 aaPredicted RBP9.5□□□□□ -0.89
SF3B2-216ENST00000534765 RARAP10276 462 aa9.5□□□□□ -0.89
SF3B2-216ENST00000534765 FGFR4P22455 802 aa9.5□□□□□ -0.89
SF3B2-216ENST00000534765 IFI35P80217 286 aaPredicted RBP9.5□□□□□ -0.89
SF3B2-216ENST00000534765 ACAP1Q15027 740 aa9.5□□□□□ -0.89
SF3B2-216ENST00000534765 SNRNP35Q16560 246 aaKnown RBP9.5□□□□□ -0.89
SF3B2-216ENST00000534765 NFIL3Q16649 462 aa9.5□□□□□ -0.89
SF3B2-216ENST00000534765 UTS2BQ765I0 119 aa9.5□□□□□ -0.89
SF3B2-216ENST00000534765 TAOK1Q7L7X3 1001 aa9.5□□□□□ -0.89
SF3B2-216ENST00000534765 NME8Q8N427 588 aa9.5□□□□□ -0.89
SF3B2-216ENST00000534765 GPRC5AQ8NFJ5 357 aa9.5□□□□□ -0.89
SF3B2-216ENST00000534765 FAM213AQ9BRX8 229 aa9.5□□□□□ -0.89
SF3B2-216ENST00000534765 C16orf70Q9BSU1 422 aa9.5□□□□□ -0.89
SF3B2-216ENST00000534765 NIFKQ9BYG3 293 aaKnown RBP9.5□□□□□ -0.89
SF3B2-216ENST00000534765 BARX2Q9UMQ3 279 aaPredicted RBP9.5□□□□□ -0.89
SF3B2-216ENST00000534765 PHF24Q9UPV7 400 aa9.5□□□□□ -0.89
SF3B2-216ENST00000534765 VNN1O95497 513 aa9.5□□□□□ -0.89
SF3B2-216ENST00000534765 PSMC2P35998 433 aaKnown RBP9.5□□□□□ -0.89
SF3B2-216ENST00000534765 TRIM32Q13049 653 aa9.5□□□□□ -0.89
SF3B2-216ENST00000534765 SLC9A9Q8IVB4 645 aa9.5□□□□□ -0.89
SF3B2-216ENST00000534765 OR5B17Q8NGF7 314 aa9.5□□□□□ -0.89
SF3B2-216ENST00000534765 AFG1LQ8WV93 481 aa9.5□□□□□ -0.89
SF3B2-216ENST00000534765 MAML3Q96JK9 1138 aa9.5□□□□□ -0.89
SF3B2-216ENST00000534765 TRAPPC9Q96Q05 1148 aa9.5□□□□□ -0.89
SF3B2-216ENST00000534765 FMO2Q99518 471 aa9.5□□□□□ -0.89
SF3B2-216ENST00000534765 TRIM51Q9BSJ1 452 aa9.5□□□□□ -0.89
SF3B2-216ENST00000534765 MKNK1Q9BUB5 465 aa9.5□□□□□ -0.89
SF3B2-216ENST00000534765 ST6GALNAC4Q9H4F1 302 aa9.5□□□□□ -0.89
SF3B2-216ENST00000534765 LRCH1Q9Y2L9 728 aa9.5□□□□□ -0.89
SF3B2-216ENST00000534765 F8VZ95 297 aa9.5□□□□□ -0.89
SF3B2-216ENST00000534765 SLC16A3O15427 465 aaKnown RBP9.5□□□□□ -0.89
SF3B2-216ENST00000534765 PGM3O95394 542 aa9.5□□□□□ -0.89
SF3B2-216ENST00000534765 YY1P25490 414 aa9.5□□□□□ -0.89
SF3B2-216ENST00000534765 HUNKP57058 714 aa9.5□□□□□ -0.89
SF3B2-216ENST00000534765 ITGA7Q13683 1181 aa9.5□□□□□ -0.89
SF3B2-216ENST00000534765 CYLC2Q14093 348 aaPredicted RBP9.5□□□□□ -0.89
SF3B2-216ENST00000534765 ARHGAP44Q17R89 818 aa9.5□□□□□ -0.89
SF3B2-216ENST00000534765 C2CD6Q53TS8 623 aa9.5□□□□□ -0.89
SF3B2-216ENST00000534765 TMEM53Q6P2H8 277 aa9.5□□□□□ -0.89
SF3B2-216ENST00000534765 FASTKD5Q7L8L6 764 aaKnown RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms