RNA–Protein interactions for RNA: ENST00000534647.1

CTNND1-238, Transcript of catenin delta 1, human

TSL 5

Gene CTNND1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNND1-238	ENST00000534647	MCTP1	Q6DN14	999 aa		12.47	□□□□□ -0.41
CTNND1-238	ENST00000534647	SLFN12L	Q6IEE8	588 aa		12.47	□□□□□ -0.41
CTNND1-238	ENST00000534647	PRR23C	Q6ZRP0	262 aa		12.47	□□□□□ -0.41
CTNND1-238	ENST00000534647	PRR23B	Q6ZRT6	265 aa		12.47	□□□□□ -0.41
CTNND1-238	ENST00000534647		Q6ZS52	159 aa		12.47	□□□□□ -0.41
CTNND1-238	ENST00000534647	GPBP1	Q86WP2	473 aa		12.47	□□□□□ -0.41
CTNND1-238	ENST00000534647	THEM5	Q8N1Q8	247 aa		12.47	□□□□□ -0.41
CTNND1-238	ENST00000534647	TTC9B	Q8N6N2	239 aa		12.47	□□□□□ -0.41
CTNND1-238	ENST00000534647	FAM200A	Q8TCP9	573 aa		12.47	□□□□□ -0.41
CTNND1-238	ENST00000534647	SPPL2B	Q8TCT7	592 aa		12.47	□□□□□ -0.41
CTNND1-238	ENST00000534647	SREK1	Q8WXA9	508 aa	Known RBP	12.47	□□□□□ -0.41
CTNND1-238	ENST00000534647	INTS4	Q96HW7	963 aa	Known RBP	12.47	□□□□□ -0.41
CTNND1-238	ENST00000534647	LOXL4	Q96JB6	756 aa		12.47	□□□□□ -0.41
CTNND1-238	ENST00000534647	FAM83C	Q9BQN1	747 aa		12.47	□□□□□ -0.41
CTNND1-238	ENST00000534647	SLC46A2	Q9BY10	475 aa		12.47	□□□□□ -0.41
CTNND1-238	ENST00000534647	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	12.47	□□□□□ -0.41
CTNND1-238	ENST00000534647	KMT2B	Q9UMN6	2715 aa	Predicted RBP	12.46	□□□□□ -0.41
CTNND1-238	ENST00000534647		K7ENM7	598 aa		12.46	□□□□□ -0.41
CTNND1-238	ENST00000534647	SOAT2	O75908	522 aa		12.46	□□□□□ -0.41
CTNND1-238	ENST00000534647	FAM13A	O94988	1023 aa		12.46	□□□□□ -0.41
CTNND1-238	ENST00000534647	PRAMEF12	O95522	483 aa		12.46	□□□□□ -0.41
CTNND1-238	ENST00000534647	BMP15	O95972	392 aa		12.46	□□□□□ -0.41
CTNND1-238	ENST00000534647	NFIC	P08651	508 aa		12.46	□□□□□ -0.41
CTNND1-238	ENST00000534647	HAPLN1	P10915	354 aa	Predicted RBP	12.46	□□□□□ -0.41
CTNND1-238	ENST00000534647	ATF6	P18850	670 aa		12.46	□□□□□ -0.41
CTNND1-238	ENST00000534647	LONP1	P36776	959 aa	Known RBP	12.46	□□□□□ -0.41
CTNND1-238	ENST00000534647	NUCB2	P80303	420 aa		12.46	□□□□□ -0.41
CTNND1-238	ENST00000534647	PON2	Q15165	354 aa		12.46	□□□□□ -0.41
CTNND1-238	ENST00000534647	SLC39A12	Q504Y0	691 aa		12.46	□□□□□ -0.41
CTNND1-238	ENST00000534647	LRRTM3	Q86VH5	581 aa		12.46	□□□□□ -0.41
CTNND1-238	ENST00000534647	METTL23	Q86XA0	190 aa		12.46	□□□□□ -0.41
CTNND1-238	ENST00000534647	NT5DC4	Q86YG4	428 aa		12.46	□□□□□ -0.41
CTNND1-238	ENST00000534647	CMTM8	Q8IZV2	173 aa		12.46	□□□□□ -0.41
CTNND1-238	ENST00000534647	LRRC15	Q8TF66	581 aa		12.46	□□□□□ -0.41
CTNND1-238	ENST00000534647	DDX1	Q92499	740 aa	Known RBP	12.46	□□□□□ -0.41
CTNND1-238	ENST00000534647	ZFYVE19	Q96K21	471 aa		12.46	□□□□□ -0.41
CTNND1-238	ENST00000534647	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	12.46	□□□□□ -0.41
CTNND1-238	ENST00000534647	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	12.45	□□□□□ -0.42
CTNND1-238	ENST00000534647	ANKRD63	C9JTQ0	380 aa		12.45	□□□□□ -0.42
CTNND1-238	ENST00000534647	CYB561D2	O14569	222 aa		12.45	□□□□□ -0.42
CTNND1-238	ENST00000534647	TRDMT1	O14717	391 aa	Known RBP	12.45	□□□□□ -0.42
CTNND1-238	ENST00000534647	ATG13	O75143	517 aa		12.45	□□□□□ -0.42
CTNND1-238	ENST00000534647	F11	P03951	625 aa		12.45	□□□□□ -0.42
CTNND1-238	ENST00000534647	HMGA1	P17096	107 aa	Known RBP	12.45	□□□□□ -0.42
CTNND1-238	ENST00000534647	DDX6	P26196	483 aa	Known RBP eCLIP	12.45	□□□□□ -0.42
CTNND1-238	ENST00000534647	DDIT3	P35638	169 aa		12.45	□□□□□ -0.42
CTNND1-238	ENST00000534647	TAF6	P49848	677 aa		12.45	□□□□□ -0.42
CTNND1-238	ENST00000534647	LIMK1	P53667	647 aa		12.45	□□□□□ -0.42
CTNND1-238	ENST00000534647	TNK2	Q07912	1038 aa		12.45	□□□□□ -0.42
CTNND1-238	ENST00000534647	MGAT5B	Q3V5L5	792 aa		12.45	□□□□□ -0.42
CTNND1-238	ENST00000534647	TMEM196	Q5HYL7	178 aa		12.45	□□□□□ -0.42
CTNND1-238	ENST00000534647	TMEM164	Q5U3C3	297 aa		12.45	□□□□□ -0.42
CTNND1-238	ENST00000534647	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	12.45	□□□□□ -0.42
CTNND1-238	ENST00000534647	TMEM150A	Q86TG1	271 aa		12.45	□□□□□ -0.42
CTNND1-238	ENST00000534647	DCP1B	Q8IZD4	617 aa	Known RBP	12.45	□□□□□ -0.42
CTNND1-238	ENST00000534647	FAM160A2	Q8N612	972 aa	Predicted RBP	12.45	□□□□□ -0.42
CTNND1-238	ENST00000534647	RAD54L	Q92698	747 aa		12.45	□□□□□ -0.42
CTNND1-238	ENST00000534647	GCNA	Q96QF7	691 aa		12.45	□□□□□ -0.42
CTNND1-238	ENST00000534647	SEPT5	Q99719	369 aa	Predicted RBP	12.45	□□□□□ -0.42
CTNND1-238	ENST00000534647	LPIN3	Q9BQK8	851 aa		12.45	□□□□□ -0.42
CTNND1-238	ENST00000534647	GKN1	Q9NS71	199 aa		12.45	□□□□□ -0.42
CTNND1-238	ENST00000534647	C2orf42	Q9NWW7	574 aa		12.45	□□□□□ -0.42
CTNND1-238	ENST00000534647	DPP3	Q9NY33	737 aa		12.45	□□□□□ -0.42
CTNND1-238	ENST00000534647	CACNA1B	Q00975	2339 aa		12.45	□□□□□ -0.42
CTNND1-238	ENST00000534647	KPNA7	A9QM74	516 aa		12.44	□□□□□ -0.42
CTNND1-238	ENST00000534647	TM4SF5	O14894	197 aa		12.44	□□□□□ -0.42
CTNND1-238	ENST00000534647	AKAP3	O75969	853 aa		12.44	□□□□□ -0.42
CTNND1-238	ENST00000534647	IL18RAP	O95256	599 aa		12.44	□□□□□ -0.42
CTNND1-238	ENST00000534647	ZNF806	P0C7X5	589 aa		12.44	□□□□□ -0.42
CTNND1-238	ENST00000534647	NMT1	P30419	496 aa	Known RBP	12.44	□□□□□ -0.42
CTNND1-238	ENST00000534647	PNPLA4	P41247	253 aa		12.44	□□□□□ -0.42
CTNND1-238	ENST00000534647	RAP1GAP	P47736	663 aa		12.44	□□□□□ -0.42
CTNND1-238	ENST00000534647	ACOT2	P49753	483 aa		12.44	□□□□□ -0.42
CTNND1-238	ENST00000534647	NLRP12	P59046	1061 aa		12.44	□□□□□ -0.42
CTNND1-238	ENST00000534647	AMPD2	Q01433	879 aa		12.44	□□□□□ -0.42
CTNND1-238	ENST00000534647	SRSF5	Q13243	272 aa	Known RBP	12.44	□□□□□ -0.42
CTNND1-238	ENST00000534647	RUNX3	Q13761	415 aa		12.44	□□□□□ -0.42
CTNND1-238	ENST00000534647	ZNF268	Q14587	947 aa	Predicted RBP	12.44	□□□□□ -0.42
CTNND1-238	ENST00000534647	POSTN	Q15063	836 aa		12.44	□□□□□ -0.42
CTNND1-238	ENST00000534647	NFKBIB	Q15653	356 aa		12.44	□□□□□ -0.42
CTNND1-238	ENST00000534647	PPM1J	Q5JR12	505 aa		12.44	□□□□□ -0.42
CTNND1-238	ENST00000534647	WSCD1	Q658N2	575 aa		12.44	□□□□□ -0.42
CTNND1-238	ENST00000534647	ADAL	Q6DHV7	355 aa		12.44	□□□□□ -0.42
CTNND1-238	ENST00000534647	CRELD2	Q6UXH1	353 aa	Predicted RBP	12.44	□□□□□ -0.42
CTNND1-238	ENST00000534647	ZNF720	Q7Z2F6	126 aa		12.44	□□□□□ -0.42
CTNND1-238	ENST00000534647	CAMKK1	Q8N5S9	505 aa		12.44	□□□□□ -0.42
CTNND1-238	ENST00000534647	TTC8	Q8TAM2	541 aa		12.44	□□□□□ -0.42
CTNND1-238	ENST00000534647	GAB3	Q8WWW8	586 aa		12.44	□□□□□ -0.42
CTNND1-238	ENST00000534647	HVCN1	Q96D96	273 aa		12.44	□□□□□ -0.42
CTNND1-238	ENST00000534647	ZC3H10	Q96K80	434 aa	Known RBP	12.44	□□□□□ -0.42
CTNND1-238	ENST00000534647	PYM1	Q9BRP8	204 aa	Known RBP	12.44	□□□□□ -0.42
CTNND1-238	ENST00000534647	STRA6	Q9BX79	667 aa		12.44	□□□□□ -0.42
CTNND1-238	ENST00000534647	KIF9	Q9HAQ2	790 aa		12.44	□□□□□ -0.42
CTNND1-238	ENST00000534647	TDP1	Q9NUW8	608 aa		12.44	□□□□□ -0.42
CTNND1-238	ENST00000534647	AGO2	Q9UKV8	859 aa	Known RBP	12.44	□□□□□ -0.42
CTNND1-238	ENST00000534647	ZMIZ1	Q9ULJ6	1067 aa		12.44	□□□□□ -0.42
CTNND1-238	ENST00000534647	MYH11	P35749	1972 aa		12.43	□□□□□ -0.42
CTNND1-238	ENST00000534647		H3BQV1	296 aa		12.43	□□□□□ -0.42
CTNND1-238	ENST00000534647	ATP9B	O43861	1147 aa		12.43	□□□□□ -0.42
CTNND1-238	ENST00000534647	EXTL3	O43909	919 aa		12.43	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms