RNA–Protein interactions for RNA: ENST00000534373.5

CAPN1-228, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-228ENST00000534373 FZD5Q13467 585 aa14.38□□□□□ -0.11
CAPN1-228ENST00000534373 PKP1Q13835 747 aa14.38□□□□□ -0.11
CAPN1-228ENST00000534373 PSMD6Q15008 389 aa14.38□□□□□ -0.11
CAPN1-228ENST00000534373 KNOP1Q1ED39 458 aaKnown RBP14.38□□□□□ -0.11
CAPN1-228ENST00000534373 SOWAHAQ2M3V2 549 aa14.38□□□□□ -0.11
CAPN1-228ENST00000534373 CFAP221Q4G0U5 840 aa14.38□□□□□ -0.11
CAPN1-228ENST00000534373 ARHGAP29Q52LW3 1261 aa14.38□□□□□ -0.11
CAPN1-228ENST00000534373 INTS6LQ5JSJ4 861 aaKnown RBP14.38□□□□□ -0.11
CAPN1-228ENST00000534373 GPR158Q5T848 1215 aa14.38□□□□□ -0.11
CAPN1-228ENST00000534373 GOLGA5Q8TBA6 731 aa14.38□□□□□ -0.11
CAPN1-228ENST00000534373 CSGALNACT1Q8TDX6 532 aa14.38□□□□□ -0.11
CAPN1-228ENST00000534373 TMEM174Q8WUU8 243 aa14.38□□□□□ -0.11
CAPN1-228ENST00000534373 HPDLQ96IR7 371 aa14.38□□□□□ -0.11
CAPN1-228ENST00000534373 FNBP1Q96RU3 617 aa14.38□□□□□ -0.11
CAPN1-228ENST00000534373 PKMYT1Q99640 499 aa14.38□□□□□ -0.11
CAPN1-228ENST00000534373 C8orf33Q9H7E9 229 aaPredicted RBP14.38□□□□□ -0.11
CAPN1-228ENST00000534373 IL21Q9HBE4 155 aa14.38□□□□□ -0.11
CAPN1-228ENST00000534373 SPATA6Q9NWH7 488 aaPredicted RBP14.38□□□□□ -0.11
CAPN1-228ENST00000534373 UXTQ9UBK9 157 aaPredicted RBP14.38□□□□□ -0.11
CAPN1-228ENST00000534373 TCHHQ07283 1943 aa14.38□□□□□ -0.11
CAPN1-228ENST00000534373 HMGA1P17096 107 aaKnown RBP14.37□□□□□ -0.11
CAPN1-228ENST00000534373 CMA1P23946 247 aa14.37□□□□□ -0.11
CAPN1-228ENST00000534373 PLCB2Q00722 1185 aa14.37□□□□□ -0.11
CAPN1-228ENST00000534373 CUL4BQ13620 913 aa14.37□□□□□ -0.11
CAPN1-228ENST00000534373 MAPRE1Q15691 268 aaKnown RBP14.37□□□□□ -0.11
CAPN1-228ENST00000534373 STXBP5Q5T5C0 1151 aa14.37□□□□□ -0.11
CAPN1-228ENST00000534373 FAM171BQ6P995 826 aa14.37□□□□□ -0.11
CAPN1-228ENST00000534373 TRAPPC11Q7Z392 1133 aa14.37□□□□□ -0.11
CAPN1-228ENST00000534373 ADGRF2Q8IZF7 708 aa14.37□□□□□ -0.11
CAPN1-228ENST00000534373 MAML2Q8IZL2 1156 aaPredicted RBP14.37□□□□□ -0.11
CAPN1-228ENST00000534373 ZNF687Q8N1G0 1237 aa14.37□□□□□ -0.11
CAPN1-228ENST00000534373 OR5B17Q8NGF7 314 aa14.37□□□□□ -0.11
CAPN1-228ENST00000534373 GIPC2Q8TF65 315 aa14.37□□□□□ -0.11
CAPN1-228ENST00000534373 FAM3CQ92520 227 aa14.37□□□□□ -0.11
CAPN1-228ENST00000534373 CEP295NLQ96MC4 621 aa14.37□□□□□ -0.11
CAPN1-228ENST00000534373 PI4K2AQ9BTU6 479 aa14.37□□□□□ -0.11
CAPN1-228ENST00000534373 BLZF1Q9H2G9 400 aa14.37□□□□□ -0.11
CAPN1-228ENST00000534373 TMLHEQ9NVH6 421 aa14.37□□□□□ -0.11
CAPN1-228ENST00000534373 ATP6V1DQ9Y5K8 247 aa14.37□□□□□ -0.11
CAPN1-228ENST00000534373 PIAS3Q9Y6X2 628 aa14.37□□□□□ -0.11
CAPN1-228ENST00000534373 VPS13AQ96RL7 3174 aa14.37□□□□□ -0.11
CAPN1-228ENST00000534373 PTPRZ1P23471 2315 aaPredicted RBP14.37□□□□□ -0.11
CAPN1-228ENST00000534373 MIA3Q5JRA6 1907 aa14.37□□□□□ -0.11
CAPN1-228ENST00000534373 F5P12259 2224 aa14.36□□□□□ -0.11
CAPN1-228ENST00000534373 CACNA1IQ9P0X4 2223 aa14.36□□□□□ -0.11
CAPN1-228ENST00000534373 CLIC2O15247 247 aa14.36□□□□□ -0.11
CAPN1-228ENST00000534373 LMNAP02545 664 aaKnown RBP14.36□□□□□ -0.11
CAPN1-228ENST00000534373 F11P03951 625 aa14.36□□□□□ -0.11
CAPN1-228ENST00000534373 TNNI1P19237 187 aa14.36□□□□□ -0.11
CAPN1-228ENST00000534373 MAGEA11P43364 429 aa14.36□□□□□ -0.11
CAPN1-228ENST00000534373 AFMP43652 599 aa14.36□□□□□ -0.11
CAPN1-228ENST00000534373 NLRP12P59046 1061 aa14.36□□□□□ -0.11
CAPN1-228ENST00000534373 KRT85P78386 507 aa14.36□□□□□ -0.11
CAPN1-228ENST00000534373 CYP24A1Q07973 514 aa14.36□□□□□ -0.11
CAPN1-228ENST00000534373 LMBRD2Q68DH5 695 aaPredicted RBP14.36□□□□□ -0.11
CAPN1-228ENST00000534373 SCARA3Q6AZY7 606 aa14.36□□□□□ -0.11
CAPN1-228ENST00000534373 C4orf50Q6ZRC1 276 aa14.36□□□□□ -0.11
CAPN1-228ENST00000534373 NELFCDQ8IXH7 590 aa14.36□□□□□ -0.11
CAPN1-228ENST00000534373 CMTM8Q8IZV2 173 aa14.36□□□□□ -0.11
CAPN1-228ENST00000534373 CELF5Q8N6W0 485 aaKnown RBP14.36□□□□□ -0.11
CAPN1-228ENST00000534373 RDH13Q8NBN7 331 aa14.36□□□□□ -0.11
CAPN1-228ENST00000534373 SPRYD3Q8NCJ5 442 aa14.36□□□□□ -0.11
CAPN1-228ENST00000534373 BPIFB1Q8TDL5 484 aa14.36□□□□□ -0.11
CAPN1-228ENST00000534373 RSPRY1Q96DX4 576 aa14.36□□□□□ -0.11
CAPN1-228ENST00000534373 TRMT2BQ96GJ1 504 aaKnown RBP14.36□□□□□ -0.11
CAPN1-228ENST00000534373 MYRFLQ96LU7 910 aa14.36□□□□□ -0.11
CAPN1-228ENST00000534373 CGRRF1Q99675 332 aa14.36□□□□□ -0.11
CAPN1-228ENST00000534373 SLC46A2Q9BY10 475 aa14.36□□□□□ -0.11
CAPN1-228ENST00000534373 SLC39A2Q9NP94 309 aa14.36□□□□□ -0.11
CAPN1-228ENST00000534373 THG1LQ9NWX6 298 aaKnown RBP14.36□□□□□ -0.11
CAPN1-228ENST00000534373 SERTAD1Q9UHV2 236 aa14.36□□□□□ -0.11
CAPN1-228ENST00000534373 GTF3C4Q9UKN8 822 aa14.36□□□□□ -0.11
CAPN1-228ENST00000534373 CDH9Q9ULB4 789 aa14.36□□□□□ -0.11
CAPN1-228ENST00000534373 RIF1Q5UIP0 2472 aaKnown RBP14.36□□□□□ -0.11
CAPN1-228ENST00000534373 PTPRJQ12913 1337 aa14.36□□□□□ -0.11
CAPN1-228ENST00000534373 ACTN4O43707 911 aaKnown RBP14.35□□□□□ -0.11
CAPN1-228ENST00000534373 TACC1O75410 805 aa14.35□□□□□ -0.11
CAPN1-228ENST00000534373 NOL4O94818 638 aa14.35□□□□□ -0.11
CAPN1-228ENST00000534373 STAU1O95793 577 aaKnown RBP14.35□□□□□ -0.11
CAPN1-228ENST00000534373 CST3P01034 146 aaPredicted RBP14.35□□□□□ -0.11
CAPN1-228ENST00000534373 DLATP10515 647 aaKnown RBP14.35□□□□□ -0.11
CAPN1-228ENST00000534373 WARSP23381 471 aaKnown RBP14.35□□□□□ -0.11
CAPN1-228ENST00000534373 ACAT1P24752 427 aaKnown RBP14.35□□□□□ -0.11
CAPN1-228ENST00000534373 CYP2F1P24903 491 aa14.35□□□□□ -0.11
CAPN1-228ENST00000534373 CASP1P29466 404 aa14.35□□□□□ -0.11
CAPN1-228ENST00000534373 AVPR1AP37288 418 aa14.35□□□□□ -0.11
CAPN1-228ENST00000534373 CYP2J2P51589 502 aa14.35□□□□□ -0.11
CAPN1-228ENST00000534373 AP3M2P53677 418 aa14.35□□□□□ -0.11
CAPN1-228ENST00000534373 VSTM1Q6UX27 236 aa14.35□□□□□ -0.11
CAPN1-228ENST00000534373 TMEM150AQ86TG1 271 aa14.35□□□□□ -0.11
CAPN1-228ENST00000534373 OSTM1Q86WC4 334 aa14.35□□□□□ -0.11
CAPN1-228ENST00000534373 RALGPS2Q86X27 583 aaPredicted RBP14.35□□□□□ -0.11
CAPN1-228ENST00000534373 SPATA2LQ8IUW3 424 aaPredicted RBP14.35□□□□□ -0.11
CAPN1-228ENST00000534373 SLC9A9Q8IVB4 645 aa14.35□□□□□ -0.11
CAPN1-228ENST00000534373 MRPS31Q92665 395 aaKnown RBP14.35□□□□□ -0.11
CAPN1-228ENST00000534373 PAGE5Q96GU1 130 aa14.35□□□□□ -0.11
CAPN1-228ENST00000534373 SPATA32Q96LK8 384 aa14.35□□□□□ -0.11
CAPN1-228ENST00000534373 LRRC3BQ96PB8 259 aa14.35□□□□□ -0.11
CAPN1-228ENST00000534373 FAM126AQ9BYI3 521 aaPredicted RBP14.35□□□□□ -0.11
CAPN1-228ENST00000534373 CHRDQ9H2X0 955 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms