RNA–Protein interactions for RNA: ENST00000534049.5

ITGB1-219, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-219ENST00000534049 C3orf20Q8ND61 904 aa4.99□□□□□ -1.61
ITGB1-219ENST00000534049 SCAMP4Q969E2 229 aa4.99□□□□□ -1.61
ITGB1-219ENST00000534049 PGBD1Q96JS3 809 aa4.99□□□□□ -1.61
ITGB1-219ENST00000534049 PDLIM2Q96JY6 352 aa4.99□□□□□ -1.61
ITGB1-219ENST00000534049 TIGD1Q96MW7 591 aa4.99□□□□□ -1.61
ITGB1-219ENST00000534049 SMOQ99835 787 aa4.99□□□□□ -1.61
ITGB1-219ENST00000534049 NCAPGQ9BPX3 1015 aa4.99□□□□□ -1.61
ITGB1-219ENST00000534049 KIAA1586Q9HCI6 787 aa4.99□□□□□ -1.61
ITGB1-219ENST00000534049 PCDHB1Q9Y5F3 818 aa4.99□□□□□ -1.61
ITGB1-219ENST00000534049 A2MP01023 1474 aa4.99□□□□□ -1.61
ITGB1-219ENST00000534049 NCOA2Q15596 1464 aa4.99□□□□□ -1.61
ITGB1-219ENST00000534049 CCDC141Q6ZP82 1450 aa4.99□□□□□ -1.61
ITGB1-219ENST00000534049 CEP170BQ9Y4F5 1589 aaPredicted RBP4.99□□□□□ -1.61
ITGB1-219ENST00000534049 SPATA31A6Q5VVP1 1343 aa4.98□□□□□ -1.61
ITGB1-219ENST00000534049 FAM135AQ9P2D6 1515 aa4.98□□□□□ -1.61
ITGB1-219ENST00000534049 LTBP4Q8N2S1 1624 aa4.98□□□□□ -1.61
ITGB1-219ENST00000534049 MROH1Q8NDA8 1641 aa4.98□□□□□ -1.61
ITGB1-219ENST00000534049 YY2O15391 372 aa4.98□□□□□ -1.61
ITGB1-219ENST00000534049 ANP32CO43423 234 aa4.98□□□□□ -1.61
ITGB1-219ENST00000534049 MALP21145 153 aa4.98□□□□□ -1.61
ITGB1-219ENST00000534049 SIM1P81133 766 aaPredicted RBP4.98□□□□□ -1.61
ITGB1-219ENST00000534049 GABPB1Q06547 395 aaPredicted RBP4.98□□□□□ -1.61
ITGB1-219ENST00000534049 MTA1Q13330 715 aa4.98□□□□□ -1.61
ITGB1-219ENST00000534049 DYRK1AQ13627 763 aa4.98□□□□□ -1.61
ITGB1-219ENST00000534049 KIAA0895LQ68EN5 471 aa4.98□□□□□ -1.61
ITGB1-219ENST00000534049 FBXO42Q6P3S6 717 aa4.98□□□□□ -1.61
ITGB1-219ENST00000534049 VWA1Q6PCB0 445 aa4.98□□□□□ -1.61
ITGB1-219ENST00000534049 SLC4A10Q6U841 1118 aa4.98□□□□□ -1.61
ITGB1-219ENST00000534049 MICALCLQ6ZW33 695 aa4.98□□□□□ -1.61
ITGB1-219ENST00000534049 RPAINQ86UA6 219 aa4.98□□□□□ -1.61
ITGB1-219ENST00000534049 FAM177A1Q8N128 213 aaPredicted RBP4.98□□□□□ -1.61
ITGB1-219ENST00000534049 CFAP52Q8N1V2 620 aa4.98□□□□□ -1.61
ITGB1-219ENST00000534049 BOLLQ8N9W6 283 aaKnown RBP4.98□□□□□ -1.61
ITGB1-219ENST00000534049 SNX19Q92543 992 aa4.98□□□□□ -1.61
ITGB1-219ENST00000534049 RAB24Q969Q5 203 aa4.98□□□□□ -1.61
ITGB1-219ENST00000534049 TMEM125Q96AQ2 219 aa4.98□□□□□ -1.61
ITGB1-219ENST00000534049 FAM167AQ96KS9 214 aa4.98□□□□□ -1.61
ITGB1-219ENST00000534049 KLHL32Q96NJ5 620 aa4.98□□□□□ -1.61
ITGB1-219ENST00000534049 TLR10Q9BXR5 811 aa4.98□□□□□ -1.61
ITGB1-219ENST00000534049 ASPSCR1Q9BZE9 553 aa4.98□□□□□ -1.61
ITGB1-219ENST00000534049 IMPG2Q9BZV3 1241 aa4.98□□□□□ -1.61
ITGB1-219ENST00000534049 MYH16Q9H6N6 1097 aa4.98□□□□□ -1.61
ITGB1-219ENST00000534049 WDCPQ9H6R7 721 aa4.98□□□□□ -1.61
ITGB1-219ENST00000534049 BRD9Q9H8M2 597 aa4.98□□□□□ -1.61
ITGB1-219ENST00000534049 HOMER2Q9NSB8 354 aa4.98□□□□□ -1.61
ITGB1-219ENST00000534049 SMC4Q9NTJ3 1288 aa4.98□□□□□ -1.61
ITGB1-219ENST00000534049 FOXJ2Q9P0K8 574 aa4.98□□□□□ -1.61
ITGB1-219ENST00000534049 ARHGEF5Q12774 1597 aa4.98□□□□□ -1.61
ITGB1-219ENST00000534049 CLTCQ00610 1675 aaKnown RBP4.98□□□□□ -1.61
ITGB1-219ENST00000534049 SPATA31A3Q5VYP0 1347 aa4.97□□□□□ -1.61
ITGB1-219ENST00000534049 RAD50Q92878 1312 aa4.97□□□□□ -1.61
ITGB1-219ENST00000534049 PTPRKQ15262 1439 aa4.97□□□□□ -1.61
ITGB1-219ENST00000534049 VPS8Q8N3P4 1428 aa4.97□□□□□ -1.61
ITGB1-219ENST00000534049 KDM5DQ9BY66 1539 aa4.97□□□□□ -1.61
ITGB1-219ENST00000534049 RNF17Q9BXT8 1623 aaKnown RBP4.97□□□□□ -1.61
ITGB1-219ENST00000534049 NEURL4Q96JN8 1562 aa4.97□□□□□ -1.61
ITGB1-219ENST00000534049 PLA2R1Q13018 1463 aa4.97□□□□□ -1.61
ITGB1-219ENST00000534049 TCOF1Q13428 1488 aaKnown RBP4.97□□□□□ -1.61
ITGB1-219ENST00000534049 MTUS2Q5JR59 1369 aa4.97□□□□□ -1.61
ITGB1-219ENST00000534049 HMGB1P1B2RPK0 211 aaPredicted RBP4.97□□□□□ -1.61
ITGB1-219ENST00000534049 TULP2O00295 520 aa4.97□□□□□ -1.61
ITGB1-219ENST00000534049 TOR1BO14657 336 aa4.97□□□□□ -1.61
ITGB1-219ENST00000534049 PROP1O75360 226 aa4.97□□□□□ -1.61
ITGB1-219ENST00000534049 SBK3P0C264 359 aa4.97□□□□□ -1.61
ITGB1-219ENST00000534049 ZNF853P0CG23 659 aa4.97□□□□□ -1.61
ITGB1-219ENST00000534049 SOX10P56693 466 aa4.97□□□□□ -1.61
ITGB1-219ENST00000534049 NXPH1P58417 271 aa4.97□□□□□ -1.61
ITGB1-219ENST00000534049 MRPS21P82921 87 aaKnown RBP4.97□□□□□ -1.61
ITGB1-219ENST00000534049 ITIH3Q06033 890 aa4.97□□□□□ -1.61
ITGB1-219ENST00000534049 TRDNQ13061 729 aa4.97□□□□□ -1.61
ITGB1-219ENST00000534049 PTPRRQ15256 657 aa4.97□□□□□ -1.61
ITGB1-219ENST00000534049 SF3B3Q15393 1217 aaKnown RBP4.97□□□□□ -1.61
ITGB1-219ENST00000534049 CCDC96Q2M329 555 aa4.97□□□□□ -1.61
ITGB1-219ENST00000534049 CCDC93Q567U6 631 aa4.97□□□□□ -1.61
ITGB1-219ENST00000534049 ANKRD23Q86SG2 305 aa4.97□□□□□ -1.61
ITGB1-219ENST00000534049 DDX17Q92841 729 aaKnown RBP4.97□□□□□ -1.61
ITGB1-219ENST00000534049 KAT5Q92993 513 aa4.97□□□□□ -1.61
ITGB1-219ENST00000534049 ITFG2Q969R8 447 aa4.97□□□□□ -1.61
ITGB1-219ENST00000534049 VOPP1Q96AW1 172 aa4.97□□□□□ -1.61
ITGB1-219ENST00000534049 CHMP4CQ96CF2 233 aa4.97□□□□□ -1.61
ITGB1-219ENST00000534049 TSPAN18Q96SJ8 248 aa4.97□□□□□ -1.61
ITGB1-219ENST00000534049 CNPPD1Q9BV87 410 aa4.97□□□□□ -1.61
ITGB1-219ENST00000534049 SPATA5L1Q9BVQ7 753 aa4.97□□□□□ -1.61
ITGB1-219ENST00000534049 CTTNBP2NLQ9P2B4 639 aa4.97□□□□□ -1.61
ITGB1-219ENST00000534049 ZDHHC8Q9ULC8 765 aa4.97□□□□□ -1.61
ITGB1-219ENST00000534049 SUPT6HQ7KZ85 1726 aaKnown RBP4.97□□□□□ -1.61
ITGB1-219ENST00000534049 TNKSO95271 1327 aa4.97□□□□□ -1.61
ITGB1-219ENST00000534049 MAST1Q9Y2H9 1570 aa4.96□□□□□ -1.62
ITGB1-219ENST00000534049 LRRC9Q6ZRR7 1453 aa4.96□□□□□ -1.62
ITGB1-219ENST00000534049 CCNB3Q8WWL7 1395 aa4.96□□□□□ -1.62
ITGB1-219ENST00000534049 FSD2A1L4K1 749 aa4.96□□□□□ -1.62
ITGB1-219ENST00000534049 MASP2O00187 686 aa4.96□□□□□ -1.62
ITGB1-219ENST00000534049 ZFPL1O95159 310 aa4.96□□□□□ -1.62
ITGB1-219ENST00000534049 RIPK4P57078 832 aa4.96□□□□□ -1.62
ITGB1-219ENST00000534049 KHDC1Q4VXA5 237 aaKnown RBP4.96□□□□□ -1.62
ITGB1-219ENST00000534049 TAPT1Q6NXT6 567 aa4.96□□□□□ -1.62
ITGB1-219ENST00000534049 ADGRG5Q8IZF4 528 aa4.96□□□□□ -1.62
ITGB1-219ENST00000534049 PDPRQ8NCN5 879 aa4.96□□□□□ -1.62
ITGB1-219ENST00000534049 SLC17A8Q8NDX2 589 aa4.96□□□□□ -1.62
ITGB1-219ENST00000534049 FBXO41Q8TF61 875 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms