RNA–Protein interactions for RNA: ENST00000533910.5

CHKA-208, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-208ENST00000533910 ADMP35318 185 aa6.21□□□□□ -1.42
CHKA-208ENST00000533910 DNM2P50570 870 aa6.21□□□□□ -1.42
CHKA-208ENST00000533910 NCKAP1LP55160 1127 aa6.21□□□□□ -1.42
CHKA-208ENST00000533910 FAM193AP78312 1265 aa6.21□□□□□ -1.42
CHKA-208ENST00000533910 MAN2A1Q16706 1144 aa6.21□□□□□ -1.42
CHKA-208ENST00000533910 PTPN21Q16825 1174 aa6.21□□□□□ -1.42
CHKA-208ENST00000533910 XKR3Q5GH77 459 aa6.21□□□□□ -1.42
CHKA-208ENST00000533910 FIGNQ5HY92 759 aa6.21□□□□□ -1.42
CHKA-208ENST00000533910 ODR4Q5SWX8 454 aa6.21□□□□□ -1.42
CHKA-208ENST00000533910 UTP14CQ5TAP6 766 aaKnown RBP6.21□□□□□ -1.42
CHKA-208ENST00000533910 GTF2IRD2BQ6EKJ0 949 aa6.21□□□□□ -1.42
CHKA-208ENST00000533910 SWSAP1Q6NVH7 229 aa6.21□□□□□ -1.42
CHKA-208ENST00000533910 RGMBQ6NW40 437 aa6.21□□□□□ -1.42
CHKA-208ENST00000533910 MAMDC4Q6UXC1 1216 aa6.21□□□□□ -1.42
CHKA-208ENST00000533910 ARMCX2Q7L311 632 aa6.21□□□□□ -1.42
CHKA-208ENST00000533910 OTUD6AQ7L8S5 288 aa6.21□□□□□ -1.42
CHKA-208ENST00000533910 ZNF720Q7Z2F6 126 aa6.21□□□□□ -1.42
CHKA-208ENST00000533910 GPR142Q7Z601 462 aa6.21□□□□□ -1.42
CHKA-208ENST00000533910 GTF2IRD2Q86UP8 949 aa6.21□□□□□ -1.42
CHKA-208ENST00000533910 THNSL2Q86YJ6 484 aa6.21□□□□□ -1.42
CHKA-208ENST00000533910 TMEM139Q8IV31 216 aa6.21□□□□□ -1.42
CHKA-208ENST00000533910 TRIM59Q8IWR1 403 aa6.21□□□□□ -1.42
CHKA-208ENST00000533910 SCUBE1Q8IWY4 988 aa6.21□□□□□ -1.42
CHKA-208ENST00000533910 FBXO16Q8IX29 292 aaPredicted RBP6.21□□□□□ -1.42
CHKA-208ENST00000533910 NELFCDQ8IXH7 590 aa6.21□□□□□ -1.42
CHKA-208ENST00000533910 FAM20CQ8IXL6 584 aa6.21□□□□□ -1.42
CHKA-208ENST00000533910 FIBCD1Q8N539 461 aa6.21□□□□□ -1.42
CHKA-208ENST00000533910 MYCT1Q8N699 235 aa6.21□□□□□ -1.42
CHKA-208ENST00000533910 TC2NQ8N9U0 490 aa6.21□□□□□ -1.42
CHKA-208ENST00000533910 MCPH1Q8NEM0 835 aa6.21□□□□□ -1.42
CHKA-208ENST00000533910 SLC7A14Q8TBB6 771 aa6.21□□□□□ -1.42
CHKA-208ENST00000533910 SCFD2Q8WU76 684 aa6.21□□□□□ -1.42
CHKA-208ENST00000533910 RNF141Q8WVD5 230 aa6.21□□□□□ -1.42
CHKA-208ENST00000533910 HVCN1Q96D96 273 aa6.21□□□□□ -1.42
CHKA-208ENST00000533910 MFSD3Q96ES6 412 aa6.21□□□□□ -1.42
CHKA-208ENST00000533910 HHIPL1Q96JK4 782 aa6.21□□□□□ -1.42
CHKA-208ENST00000533910 MYRFLQ96LU7 910 aa6.21□□□□□ -1.42
CHKA-208ENST00000533910 Q96M66 194 aa6.21□□□□□ -1.42
CHKA-208ENST00000533910 CCDC43Q96MW1 224 aaKnown RBP6.21□□□□□ -1.42
CHKA-208ENST00000533910 CEP89Q96ST8 783 aa6.21□□□□□ -1.42
CHKA-208ENST00000533910 PCYT2Q99447 389 aa6.21□□□□□ -1.42
CHKA-208ENST00000533910 TTYH3Q9C0H2 523 aa6.21□□□□□ -1.42
CHKA-208ENST00000533910 KATNBL1Q9H079 304 aa6.21□□□□□ -1.42
CHKA-208ENST00000533910 VPS16Q9H269 839 aa6.21□□□□□ -1.42
CHKA-208ENST00000533910 ZHX3Q9H4I2 956 aa6.21□□□□□ -1.42
CHKA-208ENST00000533910 C17orf75Q9HAS0 396 aa6.21□□□□□ -1.42
CHKA-208ENST00000533910 VTA1Q9NP79 307 aa6.21□□□□□ -1.42
CHKA-208ENST00000533910 XPNPEP1Q9NQW7 623 aa6.21□□□□□ -1.42
CHKA-208ENST00000533910 ZNF302Q9NR11 478 aa6.21□□□□□ -1.42
CHKA-208ENST00000533910 PDLIM7Q9NR12 457 aa6.21□□□□□ -1.42
CHKA-208ENST00000533910 CYP26B1Q9NR63 512 aa6.21□□□□□ -1.42
CHKA-208ENST00000533910 LARSQ9P2J5 1176 aaKnown RBP6.21□□□□□ -1.42
CHKA-208ENST00000533910 GPR55Q9Y2T6 319 aaPredicted RBP6.21□□□□□ -1.42
CHKA-208ENST00000533910 PCDHB12Q9Y5F1 795 aa6.21□□□□□ -1.42
CHKA-208ENST00000533910 SHISA3A0PJX4 238 aa6.2□□□□□ -1.42
CHKA-208ENST00000533910 SLC15A5A6NIM6 579 aa6.2□□□□□ -1.42
CHKA-208ENST00000533910 WASH4PA8MWX3 477 aa6.2□□□□□ -1.42
CHKA-208ENST00000533910 FAM155AB1AL88 458 aaPredicted RBP6.2□□□□□ -1.42
CHKA-208ENST00000533910 H0Y8X5 98 aa6.2□□□□□ -1.42
CHKA-208ENST00000533910 K7ENM7 598 aa6.2□□□□□ -1.42
CHKA-208ENST00000533910 CETN3O15182 167 aa6.2□□□□□ -1.42
CHKA-208ENST00000533910 NR3C1P04150 777 aa6.2□□□□□ -1.42
CHKA-208ENST00000533910 TPM2P07951 284 aa6.2□□□□□ -1.42
CHKA-208ENST00000533910 C6orf222P0C671 652 aaPredicted RBP6.2□□□□□ -1.42
CHKA-208ENST00000533910 SKILP12757 684 aa6.2□□□□□ -1.42
CHKA-208ENST00000533910 SCP2P22307 547 aa6.2□□□□□ -1.42
CHKA-208ENST00000533910 NR2F2P24468 414 aa6.2□□□□□ -1.42
CHKA-208ENST00000533910 RPL13P26373 211 aaKnown RBP6.2□□□□□ -1.42
CHKA-208ENST00000533910 ECI1P42126 302 aa6.2□□□□□ -1.42
CHKA-208ENST00000533910 MTIF2P46199 727 aaKnown RBP6.2□□□□□ -1.42
CHKA-208ENST00000533910 NPEPPSP55786 919 aa6.2□□□□□ -1.42
CHKA-208ENST00000533910 RNF4P78317 190 aa6.2□□□□□ -1.42
CHKA-208ENST00000533910 GTF2BQ00403 316 aa6.2□□□□□ -1.42
CHKA-208ENST00000533910 SP4Q02446 784 aa6.2□□□□□ -1.42
CHKA-208ENST00000533910 UBXN1Q04323 297 aa6.2□□□□□ -1.42
CHKA-208ENST00000533910 CYP4F3Q08477 520 aa6.2□□□□□ -1.42
CHKA-208ENST00000533910 BIRC2Q13490 618 aa6.2□□□□□ -1.42
CHKA-208ENST00000533910 MAP7Q14244 749 aa6.2□□□□□ -1.42
CHKA-208ENST00000533910 TARBP2Q15633 366 aaKnown RBP6.2□□□□□ -1.42
CHKA-208ENST00000533910 VWA3BQ502W6 1294 aa6.2□□□□□ -1.42
CHKA-208ENST00000533910 XKR9Q5GH70 373 aa6.2□□□□□ -1.42
CHKA-208ENST00000533910 CELF3Q5SZQ8 465 aaKnown RBP6.2□□□□□ -1.42
CHKA-208ENST00000533910 FAM160B1Q5W0V3 765 aa6.2□□□□□ -1.42
CHKA-208ENST00000533910 TAPT1Q6NXT6 567 aa6.2□□□□□ -1.42
CHKA-208ENST00000533910 PRR23CQ6ZRP0 262 aa6.2□□□□□ -1.42
CHKA-208ENST00000533910 BEND4Q6ZU67 534 aa6.2□□□□□ -1.42
CHKA-208ENST00000533910 FGD2Q7Z6J4 655 aa6.2□□□□□ -1.42
CHKA-208ENST00000533910 FRMD5Q7Z6J6 570 aa6.2□□□□□ -1.42
CHKA-208ENST00000533910 PLEKHH3Q7Z736 793 aa6.2□□□□□ -1.42
CHKA-208ENST00000533910 CNGA4Q8IV77 575 aa6.2□□□□□ -1.42
CHKA-208ENST00000533910 C12orf56Q8IXR9 622 aa6.2□□□□□ -1.42
CHKA-208ENST00000533910 ARHGEF39Q8N4T4 335 aa6.2□□□□□ -1.42
CHKA-208ENST00000533910 MSL3Q8N5Y2 521 aaKnown RBP6.2□□□□□ -1.42
CHKA-208ENST00000533910 CXorf38Q8TB03 319 aa6.2□□□□□ -1.42
CHKA-208ENST00000533910 GOLGA5Q8TBA6 731 aa6.2□□□□□ -1.42
CHKA-208ENST00000533910 SEPT1Q8WYJ6 367 aa6.2□□□□□ -1.42
CHKA-208ENST00000533910 KIFAP3Q92845 792 aa6.2□□□□□ -1.42
CHKA-208ENST00000533910 IQCDQ96DY2 449 aa6.2□□□□□ -1.42
CHKA-208ENST00000533910 CCDC51Q96ER9 411 aa6.2□□□□□ -1.42
CHKA-208ENST00000533910 EEF2KMTQ96G04 330 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms