RNA–Protein interactions for RNA: ENST00000533888.1

GSDMD-214, Transcript of gasdermin D, humanhuman

TSL 4

Gene GSDMD, Length 576 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-214ENST00000533888 PANK4Q9NVE7 773 aa16.92■□□□□ 0.3
GSDMD-214ENST00000533888 RBAKQ9NYW8 714 aaPredicted RBP16.92■□□□□ 0.3
GSDMD-214ENST00000533888 EXOC7Q9UPT5 735 aa16.92■□□□□ 0.3
GSDMD-214ENST00000533888 PCDHB5Q9Y5E4 795 aa16.92■□□□□ 0.3
GSDMD-214ENST00000533888 PCDHB13Q9Y5F0 798 aa16.92■□□□□ 0.3
GSDMD-214ENST00000533888 PTPRJQ12913 1337 aa16.92■□□□□ 0.3
GSDMD-214ENST00000533888 ATG2BQ96BY7 2078 aa16.92■□□□□ 0.3
GSDMD-214ENST00000533888 K7ESF4 209 aa16.91■□□□□ 0.3
GSDMD-214ENST00000533888 TADA3O75528 432 aa16.91■□□□□ 0.3
GSDMD-214ENST00000533888 TXLNAP40222 546 aa16.91■□□□□ 0.3
GSDMD-214ENST00000533888 CXCL12P48061 93 aa16.91■□□□□ 0.3
GSDMD-214ENST00000533888 NLRP12P59046 1061 aa16.91■□□□□ 0.3
GSDMD-214ENST00000533888 SMARCB1Q12824 385 aa16.91■□□□□ 0.3
GSDMD-214ENST00000533888 BFSP1Q12934 665 aa16.91■□□□□ 0.3
GSDMD-214ENST00000533888 SRSF5Q13243 272 aaKnown RBP16.91■□□□□ 0.3
GSDMD-214ENST00000533888 CCDC73Q6ZRK6 1079 aa16.91■□□□□ 0.3
GSDMD-214ENST00000533888 DGLUCYQ7Z3D6 616 aa16.91■□□□□ 0.3
GSDMD-214ENST00000533888 DCP1BQ8IZD4 617 aaKnown RBP16.91■□□□□ 0.3
GSDMD-214ENST00000533888 CMTM8Q8IZV2 173 aa16.91■□□□□ 0.3
GSDMD-214ENST00000533888 SPEM1Q8N4L4 309 aa16.91■□□□□ 0.3
GSDMD-214ENST00000533888 NOC3LQ8WTT2 800 aaKnown RBP16.91■□□□□ 0.3
GSDMD-214ENST00000533888 MSANTD3Q96H12 275 aa16.91■□□□□ 0.3
GSDMD-214ENST00000533888 MTMR12Q9C0I1 747 aa16.91■□□□□ 0.3
GSDMD-214ENST00000533888 SDK1Q7Z5N4 2213 aa16.9■□□□□ 0.3
GSDMD-214ENST00000533888 OTOL1A6NHN0 477 aaPredicted RBP16.9■□□□□ 0.3
GSDMD-214ENST00000533888 CHURC1-FNTBB4DL54 471 aa16.9■□□□□ 0.3
GSDMD-214ENST00000533888 EXTL3O43909 919 aa16.9■□□□□ 0.3
GSDMD-214ENST00000533888 PRPF40AO75400 957 aaKnown RBP16.9■□□□□ 0.3
GSDMD-214ENST00000533888 CYP2F1P24903 491 aa16.9■□□□□ 0.3
GSDMD-214ENST00000533888 HOXD13P35453 343 aa16.9■□□□□ 0.3
GSDMD-214ENST00000533888 PNPLA4P41247 253 aa16.9■□□□□ 0.3
GSDMD-214ENST00000533888 NASPP49321 788 aaPredicted RBP16.9■□□□□ 0.3
GSDMD-214ENST00000533888 FNTBP49356 437 aa16.9■□□□□ 0.3
GSDMD-214ENST00000533888 TSPY1Q01534 308 aa16.9■□□□□ 0.3
GSDMD-214ENST00000533888 CCINQ13939 588 aa16.9■□□□□ 0.3
GSDMD-214ENST00000533888 BECN1Q14457 450 aa16.9■□□□□ 0.3
GSDMD-214ENST00000533888 PUM1Q14671 1186 aaKnown RBP eCLIP16.9■□□□□ 0.3
GSDMD-214ENST00000533888 TAF12Q16514 161 aa16.9■□□□□ 0.3
GSDMD-214ENST00000533888 DDR2Q16832 855 aa16.9■□□□□ 0.3
GSDMD-214ENST00000533888 TXNDC8Q6A555 127 aa16.9■□□□□ 0.3
GSDMD-214ENST00000533888 TRIM68Q6AZZ1 485 aa16.9■□□□□ 0.3
GSDMD-214ENST00000533888 PKN3Q6P5Z2 889 aa16.9■□□□□ 0.3
GSDMD-214ENST00000533888 RALGPS2Q86X27 583 aaPredicted RBP16.9■□□□□ 0.3
GSDMD-214ENST00000533888 SYCP3Q8IZU3 236 aa16.9■□□□□ 0.3
GSDMD-214ENST00000533888 CSGALNACT2Q8N6G5 542 aa16.9■□□□□ 0.3
GSDMD-214ENST00000533888 MAB21L3Q8N8X9 362 aa16.9■□□□□ 0.3
GSDMD-214ENST00000533888 OR5B17Q8NGF7 314 aa16.9■□□□□ 0.3
GSDMD-214ENST00000533888 USP13Q92995 863 aaPredicted RBP16.9■□□□□ 0.3
GSDMD-214ENST00000533888 GCNAQ96QF7 691 aa16.9■□□□□ 0.3
GSDMD-214ENST00000533888 HPS4Q9NQG7 708 aa16.9■□□□□ 0.3
GSDMD-214ENST00000533888 DDX43Q9NXZ2 648 aaKnown RBP16.9■□□□□ 0.3
GSDMD-214ENST00000533888 MAGED2Q9UNF1 606 aaPredicted RBP16.9■□□□□ 0.3
GSDMD-214ENST00000533888 ANAPC1Q9H1A4 1944 aa16.9■□□□□ 0.3
GSDMD-214ENST00000533888 HRO43593 1189 aa16.89■□□□□ 0.29
GSDMD-214ENST00000533888 STX6O43752 255 aa16.89■□□□□ 0.29
GSDMD-214ENST00000533888 PAPSS2O95340 614 aaPredicted RBP16.89■□□□□ 0.29
GSDMD-214ENST00000533888 LDHAP00338 332 aaKnown RBP16.89■□□□□ 0.29
GSDMD-214ENST00000533888 NRLP54845 237 aa16.89■□□□□ 0.29
GSDMD-214ENST00000533888 LRRC32Q14392 662 aa16.89■□□□□ 0.29
GSDMD-214ENST00000533888 E2F4Q16254 413 aa16.89■□□□□ 0.29
GSDMD-214ENST00000533888 INTS6LQ5JSJ4 861 aaKnown RBP16.89■□□□□ 0.29
GSDMD-214ENST00000533888 CELF5Q8N6W0 485 aaKnown RBP16.89■□□□□ 0.29
GSDMD-214ENST00000533888 LRRC52Q8N7C0 313 aa16.89■□□□□ 0.29
GSDMD-214ENST00000533888 LINC00301Q8NCQ3 95 aa16.89■□□□□ 0.29
GSDMD-214ENST00000533888 LEO1Q8WVC0 666 aaPredicted RBP16.89■□□□□ 0.29
GSDMD-214ENST00000533888 FAM83CQ9BQN1 747 aa16.89■□□□□ 0.29
GSDMD-214ENST00000533888 ACBD6Q9BR61 282 aa16.89■□□□□ 0.29
GSDMD-214ENST00000533888 GKN1Q9NS71 199 aa16.89■□□□□ 0.29
GSDMD-214ENST00000533888 GDAP2Q9NXN4 497 aa16.89■□□□□ 0.29
GSDMD-214ENST00000533888 GTF3C4Q9UKN8 822 aa16.89■□□□□ 0.29
GSDMD-214ENST00000533888 ITGA11Q9UKX5 1188 aa16.89■□□□□ 0.29
GSDMD-214ENST00000533888 SNX9Q9Y5X1 595 aa16.89■□□□□ 0.29
GSDMD-214ENST00000533888 GREB1Q4ZG55 1949 aa16.88■□□□□ 0.29
GSDMD-214ENST00000533888 HUS1O60921 280 aa16.88■□□□□ 0.29
GSDMD-214ENST00000533888 KRT19P08727 400 aa16.88■□□□□ 0.29
GSDMD-214ENST00000533888 PLCB2Q00722 1185 aa16.88■□□□□ 0.29
GSDMD-214ENST00000533888 ALCAMQ13740 583 aa16.88■□□□□ 0.29
GSDMD-214ENST00000533888 SOWAHAQ2M3V2 549 aa16.88■□□□□ 0.29
GSDMD-214ENST00000533888 ITPRIPL2Q3MIP1 535 aa16.88■□□□□ 0.29
GSDMD-214ENST00000533888 DGKKQ5KSL6 1271 aa16.88■□□□□ 0.29
GSDMD-214ENST00000533888 NAIF1Q69YI7 327 aaPredicted RBP16.88■□□□□ 0.29
GSDMD-214ENST00000533888 HEATR6Q6AI08 1181 aaKnown RBP16.88■□□□□ 0.29
GSDMD-214ENST00000533888 LIMS2Q7Z4I7 341 aa16.88■□□□□ 0.29
GSDMD-214ENST00000533888 CBWD2Q8IUF1 395 aa16.88■□□□□ 0.29
GSDMD-214ENST00000533888 GPD1LQ8N335 351 aa16.88■□□□□ 0.29
GSDMD-214ENST00000533888 CACTINQ8WUQ7 758 aaKnown RBP16.88■□□□□ 0.29
GSDMD-214ENST00000533888 GABRDO14764 452 aa16.87■□□□□ 0.29
GSDMD-214ENST00000533888 ATP2C2O75185 946 aa16.87■□□□□ 0.29
GSDMD-214ENST00000533888 NOL4O94818 638 aa16.87■□□□□ 0.29
GSDMD-214ENST00000533888 ARSAP15289 507 aa16.87■□□□□ 0.29
GSDMD-214ENST00000533888 PKP1Q13835 747 aa16.87■□□□□ 0.29
GSDMD-214ENST00000533888 PPP2R5DQ14738 602 aa16.87■□□□□ 0.29
GSDMD-214ENST00000533888 NFE2Q16621 373 aaPredicted RBP16.87■□□□□ 0.29
GSDMD-214ENST00000533888 C1orf228Q6PIY5 440 aa16.87■□□□□ 0.29
GSDMD-214ENST00000533888 PRR23BQ6ZRT6 265 aa16.87■□□□□ 0.29
GSDMD-214ENST00000533888 ADGRF2Q8IZF7 708 aa16.87■□□□□ 0.29
GSDMD-214ENST00000533888 TMEM86AQ8N2M4 240 aa16.87■□□□□ 0.29
GSDMD-214ENST00000533888 KBTBD7Q8WVZ9 684 aa16.87■□□□□ 0.29
GSDMD-214ENST00000533888 SLC22A12Q96S37 553 aa16.87■□□□□ 0.29
GSDMD-214ENST00000533888 ZSCAN16Q9H4T2 348 aaPredicted RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms