RNA–Protein interactions for RNA: ENST00000533870.1

SOX6-217, Transcript of SRY-box 6, humanhuman

TSL 5

Gene SOX6, Length 7,224 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-217ENST00000533870 ZNF219Q9P2Y4 722 aaPredicted RBP4.23□□□□□ -1.73
SOX6-217ENST00000533870 ANKRD33BA6NCL7 494 aa4.23□□□□□ -1.73
SOX6-217ENST00000533870 H0YGN5 161 aa4.23□□□□□ -1.73
SOX6-217ENST00000533870 DNM1LO00429 736 aa4.23□□□□□ -1.73
SOX6-217ENST00000533870 CAND2O75155 1236 aa4.23□□□□□ -1.73
SOX6-217ENST00000533870 ASMTLO95671 621 aa4.23□□□□□ -1.73
SOX6-217ENST00000533870 PDHBP11177 359 aa4.23□□□□□ -1.73
SOX6-217ENST00000533870 ME2P23368 584 aa4.23□□□□□ -1.73
SOX6-217ENST00000533870 EEF1DP29692 281 aaKnown RBP4.23□□□□□ -1.73
SOX6-217ENST00000533870 DPYSQ14117 519 aa4.23□□□□□ -1.73
SOX6-217ENST00000533870 PDCD4Q53EL6 469 aaKnown RBP4.23□□□□□ -1.73
SOX6-217ENST00000533870 SAMD4BQ5PRF9 694 aaKnown RBP4.23□□□□□ -1.73
SOX6-217ENST00000533870 DCAF15Q66K64 600 aa4.23□□□□□ -1.73
SOX6-217ENST00000533870 NLGN1Q8N2Q7 840 aa4.23□□□□□ -1.73
SOX6-217ENST00000533870 ALLCQ8N6M5 410 aa4.23□□□□□ -1.73
SOX6-217ENST00000533870 KYQ8NBH2 561 aa4.23□□□□□ -1.73
SOX6-217ENST00000533870 KIAA0895Q8NCT3 520 aa4.23□□□□□ -1.73
SOX6-217ENST00000533870 GSDMBQ8TAX9 411 aa4.23□□□□□ -1.73
SOX6-217ENST00000533870 RASGRP4Q8TDF6 673 aa4.23□□□□□ -1.73
SOX6-217ENST00000533870 GMCL1Q96IK5 515 aa4.23□□□□□ -1.73
SOX6-217ENST00000533870 CCT7Q99832 543 aa4.23□□□□□ -1.73
SOX6-217ENST00000533870 PRKD2Q9BZL6 878 aa4.23□□□□□ -1.73
SOX6-217ENST00000533870 AS3MTQ9HBK9 375 aa4.23□□□□□ -1.73
SOX6-217ENST00000533870 MOV10Q9HCE1 1003 aaKnown RBP4.23□□□□□ -1.73
SOX6-217ENST00000533870 PNPLA8Q9NP80 782 aa4.23□□□□□ -1.73
SOX6-217ENST00000533870 CD320Q9NPF0 282 aa4.23□□□□□ -1.73
SOX6-217ENST00000533870 ZDHHC18Q9NUE0 388 aa4.23□□□□□ -1.73
SOX6-217ENST00000533870 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.23□□□□□ -1.73
SOX6-217ENST00000533870 HEY2Q9UBP5 337 aa4.23□□□□□ -1.73
SOX6-217ENST00000533870 VPS9D1Q9Y2B5 631 aa4.23□□□□□ -1.73
SOX6-217ENST00000533870 SH3GLB1Q9Y371 365 aa4.23□□□□□ -1.73
SOX6-217ENST00000533870 NFS1Q9Y697 457 aa4.23□□□□□ -1.73
SOX6-217ENST00000533870 C1orf167Q5SNV9 1468 aa4.23□□□□□ -1.73
SOX6-217ENST00000533870 PNMA8CA0A1B0GUJ8 204 aa4.23□□□□□ -1.73
SOX6-217ENST00000533870 SGK1O00141 431 aa4.23□□□□□ -1.73
SOX6-217ENST00000533870 SMNDC1O75940 238 aaKnown RBP eCLIP4.23□□□□□ -1.73
SOX6-217ENST00000533870 FAM155BO75949 473 aa4.23□□□□□ -1.73
SOX6-217ENST00000533870 PSAPP07602 524 aa4.23□□□□□ -1.73
SOX6-217ENST00000533870 SERPINA6P08185 405 aa4.23□□□□□ -1.73
SOX6-217ENST00000533870 COL6A2P12110 1019 aa4.23□□□□□ -1.73
SOX6-217ENST00000533870 VCAM1P19320 739 aa4.23□□□□□ -1.73
SOX6-217ENST00000533870 PAX3P23760 479 aa4.23□□□□□ -1.73
SOX6-217ENST00000533870 POLD2P49005 469 aa4.23□□□□□ -1.73
SOX6-217ENST00000533870 EPHB1P54762 984 aa4.23□□□□□ -1.73
SOX6-217ENST00000533870 BNIP2Q12982 314 aa4.23□□□□□ -1.73
SOX6-217ENST00000533870 PTK7Q13308 1070 aa4.23□□□□□ -1.73
SOX6-217ENST00000533870 CCDC153Q494R4 210 aa4.23□□□□□ -1.73
SOX6-217ENST00000533870 INTS6LQ5JSJ4 861 aaKnown RBP4.23□□□□□ -1.73
SOX6-217ENST00000533870 MROH9Q5TGP6 573 aa4.23□□□□□ -1.73
SOX6-217ENST00000533870 CDCA2Q69YH5 1023 aaPredicted RBP4.23□□□□□ -1.73
SOX6-217ENST00000533870 TTC30AQ86WT1 665 aa4.23□□□□□ -1.73
SOX6-217ENST00000533870 PHF13Q86YI8 300 aaPredicted RBP4.23□□□□□ -1.73
SOX6-217ENST00000533870 RFX6Q8HWS3 928 aa4.23□□□□□ -1.73
SOX6-217ENST00000533870 SLC26A7Q8TE54 656 aa4.23□□□□□ -1.73
SOX6-217ENST00000533870 AFG1LQ8WV93 481 aa4.23□□□□□ -1.73
SOX6-217ENST00000533870 CASP10Q92851 521 aa4.23□□□□□ -1.73
SOX6-217ENST00000533870 EME1Q96AY2 570 aa4.23□□□□□ -1.73
SOX6-217ENST00000533870 ZNF333Q96JL9 665 aa4.23□□□□□ -1.73
SOX6-217ENST00000533870 ADPGKQ9BRR6 497 aa4.23□□□□□ -1.73
SOX6-217ENST00000533870 ZWILCHQ9H900 591 aa4.23□□□□□ -1.73
SOX6-217ENST00000533870 SLC9A2Q9UBY0 812 aa4.23□□□□□ -1.73
SOX6-217ENST00000533870 MYRFQ9Y2G1 1151 aa4.23□□□□□ -1.73
SOX6-217ENST00000533870 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.23□□□□□ -1.73
SOX6-217ENST00000533870 TRIM13O60858 407 aa4.23□□□□□ -1.73
SOX6-217ENST00000533870 TDP2O95551 362 aa4.23□□□□□ -1.73
SOX6-217ENST00000533870 MGAT5Q09328 741 aa4.23□□□□□ -1.73
SOX6-217ENST00000533870 RPS6KA2Q15349 733 aa4.23□□□□□ -1.73
SOX6-217ENST00000533870 TTC39BQ5VTQ0 682 aaPredicted RBP4.23□□□□□ -1.73
SOX6-217ENST00000533870 ARMCX2Q7L311 632 aa4.23□□□□□ -1.73
SOX6-217ENST00000533870 PIWIL4Q7Z3Z4 852 aaKnown RBP4.23□□□□□ -1.73
SOX6-217ENST00000533870 IRF2BP2Q7Z5L9 587 aa4.23□□□□□ -1.73
SOX6-217ENST00000533870 NT5DC4Q86YG4 428 aa4.23□□□□□ -1.73
SOX6-217ENST00000533870 LRRC49Q8IUZ0 686 aa4.23□□□□□ -1.73
SOX6-217ENST00000533870 S100ZQ8WXG8 99 aa4.23□□□□□ -1.73
SOX6-217ENST00000533870 ZBTB18Q99592 522 aa4.23□□□□□ -1.73
SOX6-217ENST00000533870 BCL7BQ9BQE9 202 aa4.23□□□□□ -1.73
SOX6-217ENST00000533870 KMT5AQ9NQR1 393 aa4.23□□□□□ -1.73
SOX6-217ENST00000533870 DDX43Q9NXZ2 648 aaKnown RBP4.23□□□□□ -1.73
SOX6-217ENST00000533870 RAD54BQ9Y620 910 aa4.23□□□□□ -1.73
SOX6-217ENST00000533870 BCL9LQ86UU0 1499 aa4.23□□□□□ -1.73
SOX6-217ENST00000533870 EMSYQ7Z589 1322 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 TRIM49D1C9J1S8 452 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 ECM2O94769 699 aaPredicted RBP4.22□□□□□ -1.73
SOX6-217ENST00000533870 TYK2P29597 1187 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 RFC4P35249 363 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 VPS41P49754 854 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 ROR1Q01973 937 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 PRPSAP1Q14558 356 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 MTX3Q5HYI7 312 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 LRRC8EQ6NSJ5 796 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 GPR141Q7Z602 305 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 C4orf19Q8IY42 314 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 NDUFAF2Q8N183 169 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 SETD9Q8NE22 299 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 MAML1Q92585 1016 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 PPWD1Q96BP3 646 aaKnown RBP4.22□□□□□ -1.73
SOX6-217ENST00000533870 RBBP8Q99708 897 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 RRN3Q9NYV6 651 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 L3MBTL1Q9Y468 752 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 PPRC1Q5VV67 1664 aaKnown RBP4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms