RNA–Protein interactions for RNA: ENST00000533643.1

COMMD9-208, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-208ENST00000533643 C2orf71A6NGG8 1288 aa12.68□□□□□ -0.38
COMMD9-208ENST00000533643 AKR1B15C9JRZ8 316 aaPredicted RBP12.68□□□□□ -0.38
COMMD9-208ENST00000533643 TEX28O15482 410 aa12.68□□□□□ -0.38
COMMD9-208ENST00000533643 MFAP3LO75121 409 aa12.68□□□□□ -0.38
COMMD9-208ENST00000533643 TPM1P09493 284 aa12.68□□□□□ -0.38
COMMD9-208ENST00000533643 CNPP09543 421 aaKnown RBP12.68□□□□□ -0.38
COMMD9-208ENST00000533643 OR1D2P34982 312 aa12.68□□□□□ -0.38
COMMD9-208ENST00000533643 ADKP55263 362 aaKnown RBP12.68□□□□□ -0.38
COMMD9-208ENST00000533643 ARPP19P56211 112 aa12.68□□□□□ -0.38
COMMD9-208ENST00000533643 TSPY1Q01534 308 aa12.68□□□□□ -0.38
COMMD9-208ENST00000533643 CREMQ03060 361 aa12.68□□□□□ -0.38
COMMD9-208ENST00000533643 ARID5AQ03989 594 aa12.68□□□□□ -0.38
COMMD9-208ENST00000533643 BMS1Q14692 1282 aaKnown RBP12.68□□□□□ -0.38
COMMD9-208ENST00000533643 SLC39A12Q504Y0 691 aa12.68□□□□□ -0.38
COMMD9-208ENST00000533643 MDH1BQ5I0G3 518 aa12.68□□□□□ -0.38
COMMD9-208ENST00000533643 SFMBT2Q5VUG0 894 aa12.68□□□□□ -0.38
COMMD9-208ENST00000533643 SLC8B1Q6J4K2 584 aa12.68□□□□□ -0.38
COMMD9-208ENST00000533643 PDE12Q6L8Q7 609 aaKnown RBP12.68□□□□□ -0.38
COMMD9-208ENST00000533643 SLC47A2Q86VL8 602 aa12.68□□□□□ -0.38
COMMD9-208ENST00000533643 DCP1BQ8IZD4 617 aaKnown RBP12.68□□□□□ -0.38
COMMD9-208ENST00000533643 OR8K1Q8NGG5 319 aa12.68□□□□□ -0.38
COMMD9-208ENST00000533643 MYCBPAPQ8TBZ2 947 aa12.68□□□□□ -0.38
COMMD9-208ENST00000533643 TFAP2BQ92481 460 aa12.68□□□□□ -0.38
COMMD9-208ENST00000533643 SYN2Q92777 582 aaPredicted RBP12.68□□□□□ -0.38
COMMD9-208ENST00000533643 KLHL5Q96PQ7 755 aa12.68□□□□□ -0.38
COMMD9-208ENST00000533643 DNAJC7Q99615 494 aa12.68□□□□□ -0.38
COMMD9-208ENST00000533643 ZSWIM1Q9BR11 485 aa12.68□□□□□ -0.38
COMMD9-208ENST00000533643 DNAI2Q9GZS0 605 aa12.68□□□□□ -0.38
COMMD9-208ENST00000533643 NUCKS1Q9H1E3 243 aaKnown RBP12.68□□□□□ -0.38
COMMD9-208ENST00000533643 TMLHEQ9NVH6 421 aa12.68□□□□□ -0.38
COMMD9-208ENST00000533643 IMPACTQ9P2X3 320 aa12.68□□□□□ -0.38
COMMD9-208ENST00000533643 GTF3C4Q9UKN8 822 aa12.68□□□□□ -0.38
COMMD9-208ENST00000533643 KIAA1257Q9ULG3 409 aa12.68□□□□□ -0.38
COMMD9-208ENST00000533643 VDRP11473 427 aa12.67□□□□□ -0.38
COMMD9-208ENST00000533643 FERP16591 822 aa12.67□□□□□ -0.38
COMMD9-208ENST00000533643 BRD2P25440 801 aaKnown RBP12.67□□□□□ -0.38
COMMD9-208ENST00000533643 HNRNPH3P31942 346 aaKnown RBP12.67□□□□□ -0.38
COMMD9-208ENST00000533643 CA8P35219 290 aa12.67□□□□□ -0.38
COMMD9-208ENST00000533643 CDR1P51861 262 aa12.67□□□□□ -0.38
COMMD9-208ENST00000533643 BPIFB4P59827 614 aa12.67□□□□□ -0.38
COMMD9-208ENST00000533643 ROR1Q01973 937 aa12.67□□□□□ -0.38
COMMD9-208ENST00000533643 GPR17Q13304 367 aa12.67□□□□□ -0.38
COMMD9-208ENST00000533643 RAB33AQ14088 237 aa12.67□□□□□ -0.38
COMMD9-208ENST00000533643 ARID5BQ14865 1188 aa12.67□□□□□ -0.38
COMMD9-208ENST00000533643 GRIN2CQ14957 1233 aa12.67□□□□□ -0.38
COMMD9-208ENST00000533643 ASIC2Q16515 512 aa12.67□□□□□ -0.38
COMMD9-208ENST00000533643 HABP4Q5JVS0 413 aaKnown RBP12.67□□□□□ -0.38
COMMD9-208ENST00000533643 NOP9Q86U38 636 aaKnown RBP12.67□□□□□ -0.38
COMMD9-208ENST00000533643 CNGA4Q8IV77 575 aa12.67□□□□□ -0.38
COMMD9-208ENST00000533643 GLYCTKQ8IVS8 523 aa12.67□□□□□ -0.38
COMMD9-208ENST00000533643 TC2NQ8N9U0 490 aa12.67□□□□□ -0.38
COMMD9-208ENST00000533643 MRPL38Q96DV4 380 aaKnown RBP12.67□□□□□ -0.38
COMMD9-208ENST00000533643 EMILIN2Q9BXX0 1053 aa12.67□□□□□ -0.38
COMMD9-208ENST00000533643 B3GNT5Q9BYG0 378 aa12.67□□□□□ -0.38
COMMD9-208ENST00000533643 PRDM12Q9H4Q4 367 aa12.67□□□□□ -0.38
COMMD9-208ENST00000533643 WDR27A2RRH5 827 aa12.66□□□□□ -0.38
COMMD9-208ENST00000533643 ABLIM3O94929 683 aa12.66□□□□□ -0.38
COMMD9-208ENST00000533643 VNN2O95498 520 aa12.66□□□□□ -0.38
COMMD9-208ENST00000533643 SKILP12757 684 aa12.66□□□□□ -0.38
COMMD9-208ENST00000533643 CCDC130P13994 396 aa12.66□□□□□ -0.38
COMMD9-208ENST00000533643 CPB1P15086 417 aa12.66□□□□□ -0.38
COMMD9-208ENST00000533643 CD19P15391 556 aa12.66□□□□□ -0.38
COMMD9-208ENST00000533643 CYP11B1P15538 503 aa12.66□□□□□ -0.38
COMMD9-208ENST00000533643 GNA15P30679 374 aa12.66□□□□□ -0.38
COMMD9-208ENST00000533643 NDUFV1P49821 464 aa12.66□□□□□ -0.38
COMMD9-208ENST00000533643 PTK2Q05397 1052 aa12.66□□□□□ -0.38
COMMD9-208ENST00000533643 MAPRE1Q15691 268 aaKnown RBP12.66□□□□□ -0.38
COMMD9-208ENST00000533643 PTPROQ16827 1216 aa12.66□□□□□ -0.38
COMMD9-208ENST00000533643 SGO2Q562F6 1265 aa12.66□□□□□ -0.38
COMMD9-208ENST00000533643 PPP1R26Q5T8A7 1209 aaPredicted RBP12.66□□□□□ -0.38
COMMD9-208ENST00000533643 ARHGAP17Q68EM7 881 aa12.66□□□□□ -0.38
COMMD9-208ENST00000533643 WDR59Q6PJI9 974 aa12.66□□□□□ -0.38
COMMD9-208ENST00000533643 RNF19BQ6ZMZ0 732 aa12.66□□□□□ -0.38
COMMD9-208ENST00000533643 PAQR9Q6ZVX9 377 aa12.66□□□□□ -0.38
COMMD9-208ENST00000533643 FUKQ8N0W3 1084 aa12.66□□□□□ -0.38
COMMD9-208ENST00000533643 EPS8L1Q8TE68 723 aa12.66□□□□□ -0.38
COMMD9-208ENST00000533643 ANP32BQ92688 251 aaKnown RBP12.66□□□□□ -0.38
COMMD9-208ENST00000533643 MYLPFQ96A32 169 aa12.66□□□□□ -0.38
COMMD9-208ENST00000533643 CYFIP2Q96F07 1278 aa12.66□□□□□ -0.38
COMMD9-208ENST00000533643 HNRNPABQ99729 332 aaKnown RBP12.66□□□□□ -0.38
COMMD9-208ENST00000533643 ABHD10Q9NUJ1 306 aa12.66□□□□□ -0.38
COMMD9-208ENST00000533643 FAM49BQ9NUQ9 324 aa12.66□□□□□ -0.38
COMMD9-208ENST00000533643 NOCTQ9UK39 431 aaKnown RBP12.66□□□□□ -0.38
COMMD9-208ENST00000533643 O00370 1275 aa12.65□□□□□ -0.38
COMMD9-208ENST00000533643 CLDN5O00501 218 aa12.65□□□□□ -0.38
COMMD9-208ENST00000533643 THAP12O43422 761 aa12.65□□□□□ -0.38
COMMD9-208ENST00000533643 CLASP2O75122 1294 aaKnown RBP12.65□□□□□ -0.38
COMMD9-208ENST00000533643 ADH1AP07327 375 aa12.65□□□□□ -0.38
COMMD9-208ENST00000533643 CFHP08603 1231 aa12.65□□□□□ -0.38
COMMD9-208ENST00000533643 CCDC172P0C7W6 258 aa12.65□□□□□ -0.38
COMMD9-208ENST00000533643 CHRNB2P17787 502 aa12.65□□□□□ -0.38
COMMD9-208ENST00000533643 KLRC2P26717 231 aa12.65□□□□□ -0.38
COMMD9-208ENST00000533643 PRKCIP41743 596 aa12.65□□□□□ -0.38
COMMD9-208ENST00000533643 CYP27A1Q02318 531 aa12.65□□□□□ -0.38
COMMD9-208ENST00000533643 CNGA2Q16280 664 aa12.65□□□□□ -0.38
COMMD9-208ENST00000533643 NFE2Q16621 373 aaPredicted RBP12.65□□□□□ -0.38
COMMD9-208ENST00000533643 ZNF697Q5TEC3 545 aa12.65□□□□□ -0.38
COMMD9-208ENST00000533643 TAF3Q5VWG9 929 aa12.65□□□□□ -0.38
COMMD9-208ENST00000533643 TPGS2Q68CL5 300 aa12.65□□□□□ -0.38
COMMD9-208ENST00000533643 HGSNATQ68CP4 663 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms