RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 ABI2Q9NYB9 513 aaPredicted RBP12.8□□□□□ -0.36
SSBP3-214ENST00000533209 MAGEC2Q9UBF1 373 aaPredicted RBP12.8□□□□□ -0.36
SSBP3-214ENST00000533209 HMGXB4Q9UGU5 601 aa12.8□□□□□ -0.36
SSBP3-214ENST00000533209 SLC27A5Q9Y2P5 690 aa12.8□□□□□ -0.36
SSBP3-214ENST00000533209 PCDHB5Q9Y5E4 795 aa12.8□□□□□ -0.36
SSBP3-214ENST00000533209 C5orf42Q9H799 3197 aa12.8□□□□□ -0.36
SSBP3-214ENST00000533209 KCNJ18B7U540 433 aa12.79□□□□□ -0.36
SSBP3-214ENST00000533209 XYLBO75191 536 aa12.79□□□□□ -0.36
SSBP3-214ENST00000533209 SOAT2O75908 522 aa12.79□□□□□ -0.36
SSBP3-214ENST00000533209 LRG1P02750 347 aa12.79□□□□□ -0.36
SSBP3-214ENST00000533209 HAPLN1P10915 354 aaPredicted RBP12.79□□□□□ -0.36
SSBP3-214ENST00000533209 NDST1P52848 882 aa12.79□□□□□ -0.36
SSBP3-214ENST00000533209 TWF1Q12792 350 aa12.79□□□□□ -0.36
SSBP3-214ENST00000533209 CETN1Q12798 172 aa12.79□□□□□ -0.36
SSBP3-214ENST00000533209 LRMPQ12912 555 aa12.79□□□□□ -0.36
SSBP3-214ENST00000533209 KCNJ12Q14500 433 aa12.79□□□□□ -0.36
SSBP3-214ENST00000533209 NCAPHQ15003 741 aa12.79□□□□□ -0.36
SSBP3-214ENST00000533209 MAN2A1Q16706 1144 aa12.79□□□□□ -0.36
SSBP3-214ENST00000533209 ZSCAN23Q3MJ62 389 aa12.79□□□□□ -0.36
SSBP3-214ENST00000533209 TCP11X2Q5H9J9 407 aa12.79□□□□□ -0.36
SSBP3-214ENST00000533209 MDH1BQ5I0G3 518 aa12.79□□□□□ -0.36
SSBP3-214ENST00000533209 MIIPQ5JXC2 388 aa12.79□□□□□ -0.36
SSBP3-214ENST00000533209 UNC93AQ86WB7 457 aa12.79□□□□□ -0.36
SSBP3-214ENST00000533209 EHBP1Q8NDI1 1231 aa12.79□□□□□ -0.36
SSBP3-214ENST00000533209 MYCBPAPQ8TBZ2 947 aa12.79□□□□□ -0.36
SSBP3-214ENST00000533209 ARID3AQ99856 593 aa12.79□□□□□ -0.36
SSBP3-214ENST00000533209 TUBGCP2Q9BSJ2 902 aa12.79□□□□□ -0.36
SSBP3-214ENST00000533209 PHF7Q9BWX1 381 aaPredicted RBP12.79□□□□□ -0.36
SSBP3-214ENST00000533209 INTS2Q9H0H0 1204 aaKnown RBP12.79□□□□□ -0.36
SSBP3-214ENST00000533209 WDR6Q9NNW5 1121 aaKnown RBP12.79□□□□□ -0.36
SSBP3-214ENST00000533209 ABCB6Q9NP58 842 aa12.79□□□□□ -0.36
SSBP3-214ENST00000533209 FANCLQ9NW38 375 aa12.79□□□□□ -0.36
SSBP3-214ENST00000533209 CEP72Q9P209 647 aa12.79□□□□□ -0.36
SSBP3-214ENST00000533209 DNMT3BQ9UBC3 853 aaKnown RBP12.79□□□□□ -0.36
SSBP3-214ENST00000533209 MTCL1Q9Y4B5 1905 aaKnown RBP12.78□□□□□ -0.36
SSBP3-214ENST00000533209 TTC28Q96AY4 2481 aa12.78□□□□□ -0.36
SSBP3-214ENST00000533209 CILPO75339 1184 aa12.78□□□□□ -0.36
SSBP3-214ENST00000533209 ATF6P18850 670 aa12.78□□□□□ -0.36
SSBP3-214ENST00000533209 CD58P19256 250 aa12.78□□□□□ -0.36
SSBP3-214ENST00000533209 CYP2F1P24903 491 aa12.78□□□□□ -0.36
SSBP3-214ENST00000533209 EEF1GP26641 437 aaKnown RBP12.78□□□□□ -0.36
SSBP3-214ENST00000533209 TUFMP49411 452 aaKnown RBP12.78□□□□□ -0.36
SSBP3-214ENST00000533209 NTHL1P78549 312 aa12.78□□□□□ -0.36
SSBP3-214ENST00000533209 ZP2Q05996 745 aa12.78□□□□□ -0.36
SSBP3-214ENST00000533209 ORC1Q13415 861 aa12.78□□□□□ -0.36
SSBP3-214ENST00000533209 CUL2Q13617 745 aa12.78□□□□□ -0.36
SSBP3-214ENST00000533209 MAPRE1Q15691 268 aaKnown RBP12.78□□□□□ -0.36
SSBP3-214ENST00000533209 CFAP221Q4G0U5 840 aa12.78□□□□□ -0.36
SSBP3-214ENST00000533209 GRASPQ7Z6J2 395 aaPredicted RBP12.78□□□□□ -0.36
SSBP3-214ENST00000533209 ACOT1Q86TX2 421 aa12.78□□□□□ -0.36
SSBP3-214ENST00000533209 SPATA2LQ8IUW3 424 aaPredicted RBP12.78□□□□□ -0.36
SSBP3-214ENST00000533209 ADHFE1Q8IWW8 467 aa12.78□□□□□ -0.36
SSBP3-214ENST00000533209 CRYBG2Q8N1P7 616 aa12.78□□□□□ -0.36
SSBP3-214ENST00000533209 AOPEPQ8N6M6 819 aa12.78□□□□□ -0.36
SSBP3-214ENST00000533209 B3GALNT2Q8NCR0 500 aa12.78□□□□□ -0.36
SSBP3-214ENST00000533209 ADAMTS19Q8TE59 1207 aa12.78□□□□□ -0.36
SSBP3-214ENST00000533209 WHAMMQ8TF30 809 aa12.78□□□□□ -0.36
SSBP3-214ENST00000533209 MYLPFQ96A32 169 aa12.78□□□□□ -0.36
SSBP3-214ENST00000533209 PCED1BQ96HM7 432 aa12.78□□□□□ -0.36
SSBP3-214ENST00000533209 FUBP3Q96I24 572 aaKnown RBP eCLIP12.78□□□□□ -0.36
SSBP3-214ENST00000533209 TNIP3Q96KP6 325 aa12.78□□□□□ -0.36
SSBP3-214ENST00000533209 NT5C1BQ96P26 610 aa12.78□□□□□ -0.36
SSBP3-214ENST00000533209 TWNKQ96RR1 684 aa12.78□□□□□ -0.36
SSBP3-214ENST00000533209 SEPT5Q99719 369 aaPredicted RBP12.78□□□□□ -0.36
SSBP3-214ENST00000533209 BPIFA3Q9BQP9 254 aa12.78□□□□□ -0.36
SSBP3-214ENST00000533209 NAT10Q9H0A0 1025 aaKnown RBP12.78□□□□□ -0.36
SSBP3-214ENST00000533209 HSD3B7Q9H2F3 369 aa12.78□□□□□ -0.36
SSBP3-214ENST00000533209 NDST4Q9H3R1 872 aa12.78□□□□□ -0.36
SSBP3-214ENST00000533209 PIDD1Q9HB75 910 aa12.78□□□□□ -0.36
SSBP3-214ENST00000533209 HCFC1R1Q9NWW0 138 aa12.78□□□□□ -0.36
SSBP3-214ENST00000533209 PRKAG3Q9UGI9 489 aa12.78□□□□□ -0.36
SSBP3-214ENST00000533209 CLUHO75153 1309 aa12.78□□□□□ -0.36
SSBP3-214ENST00000533209 GTPBP10A4D1E9 387 aaKnown RBP12.77□□□□□ -0.37
SSBP3-214ENST00000533209 PRKCSHP14314 528 aaPredicted RBP12.77□□□□□ -0.37
SSBP3-214ENST00000533209 ZNF18P17022 549 aa12.77□□□□□ -0.37
SSBP3-214ENST00000533209 MAGEA11P43364 429 aa12.77□□□□□ -0.37
SSBP3-214ENST00000533209 ALDH1A3P47895 512 aa12.77□□□□□ -0.37
SSBP3-214ENST00000533209 GPR15P49685 360 aa12.77□□□□□ -0.37
SSBP3-214ENST00000533209 PLD1Q13393 1074 aa12.77□□□□□ -0.37
SSBP3-214ENST00000533209 KRT31Q15323 416 aa12.77□□□□□ -0.37
SSBP3-214ENST00000533209 MGAT5BQ3V5L5 792 aa12.77□□□□□ -0.37
SSBP3-214ENST00000533209 VWA3BQ502W6 1294 aa12.77□□□□□ -0.37
SSBP3-214ENST00000533209 C4orf50Q6ZRC1 276 aa12.77□□□□□ -0.37
SSBP3-214ENST00000533209 ARHGEF19Q8IW93 802 aa12.77□□□□□ -0.37
SSBP3-214ENST00000533209 DHX40Q8IX18 779 aaKnown RBP12.77□□□□□ -0.37
SSBP3-214ENST00000533209 TTC39CQ8N584 583 aa12.77□□□□□ -0.37
SSBP3-214ENST00000533209 UBR7Q8N806 425 aa12.77□□□□□ -0.37
SSBP3-214ENST00000533209 KAT5Q92993 513 aa12.77□□□□□ -0.37
SSBP3-214ENST00000533209 NECAB3Q96P71 396 aaPredicted RBP12.77□□□□□ -0.37
SSBP3-214ENST00000533209 CRACR2AQ9BSW2 395 aa12.77□□□□□ -0.37
SSBP3-214ENST00000533209 NT5C1AQ9BXI3 368 aa12.77□□□□□ -0.37
SSBP3-214ENST00000533209 B3GNT5Q9BYG0 378 aa12.77□□□□□ -0.37
SSBP3-214ENST00000533209 ELOVL4Q9GZR5 314 aa12.77□□□□□ -0.37
SSBP3-214ENST00000533209 FAM124BQ9H5Z6 455 aaPredicted RBP12.77□□□□□ -0.37
SSBP3-214ENST00000533209 CISHQ9NSE2 258 aa12.77□□□□□ -0.37
SSBP3-214ENST00000533209 TAB2Q9NYJ8 693 aa12.77□□□□□ -0.37
SSBP3-214ENST00000533209 GCNT4Q9P109 453 aa12.77□□□□□ -0.37
SSBP3-214ENST00000533209 VCANP13611 3396 aa12.77□□□□□ -0.37
SSBP3-214ENST00000533209 C19orf67A6NJJ6 358 aa12.76□□□□□ -0.37
SSBP3-214ENST00000533209 LOC730098B7Z3J9 87 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms