RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 FGF19O95750 216 aa12.24□□□□□ -0.45
TRAPPC4-213ENST00000533149 RPN1P04843 607 aaKnown RBP12.24□□□□□ -0.45
TRAPPC4-213ENST00000533149 MYL1P05976 194 aa12.24□□□□□ -0.45
TRAPPC4-213ENST00000533149 SLC12A3P55017 1021 aa12.24□□□□□ -0.45
TRAPPC4-213ENST00000533149 IRX4P78413 519 aa12.24□□□□□ -0.45
TRAPPC4-213ENST00000533149 TNK2Q07912 1038 aa12.24□□□□□ -0.45
TRAPPC4-213ENST00000533149 STX1AQ16623 288 aa12.24□□□□□ -0.45
TRAPPC4-213ENST00000533149 DCAF4L1Q3SXM0 396 aa12.24□□□□□ -0.45
TRAPPC4-213ENST00000533149 FBXO43Q4G163 708 aa12.24□□□□□ -0.45
TRAPPC4-213ENST00000533149 USP39Q53GS9 565 aaKnown RBP12.24□□□□□ -0.45
TRAPPC4-213ENST00000533149 ARHGAP15Q53QZ3 475 aa12.24□□□□□ -0.45
TRAPPC4-213ENST00000533149 PMS2CLQ68D20 193 aa12.24□□□□□ -0.45
TRAPPC4-213ENST00000533149 CDCA2Q69YH5 1023 aaPredicted RBP12.24□□□□□ -0.45
TRAPPC4-213ENST00000533149 FSTL4Q6MZW2 842 aa12.24□□□□□ -0.45
TRAPPC4-213ENST00000533149 ZNF280DQ6N043 979 aa12.24□□□□□ -0.45
TRAPPC4-213ENST00000533149 SYT13Q7L8C5 426 aa12.24□□□□□ -0.45
TRAPPC4-213ENST00000533149 APBB1IPQ7Z5R6 666 aaPredicted RBP12.24□□□□□ -0.45
TRAPPC4-213ENST00000533149 SYT2Q8N9I0 419 aaPredicted RBP12.24□□□□□ -0.45
TRAPPC4-213ENST00000533149 GLIS3Q8NEA6 775 aa12.24□□□□□ -0.45
TRAPPC4-213ENST00000533149 PIGOQ8TEQ8 1089 aa12.24□□□□□ -0.45
TRAPPC4-213ENST00000533149 EXOC4Q96A65 974 aa12.24□□□□□ -0.45
TRAPPC4-213ENST00000533149 LRRC3BQ96PB8 259 aa12.24□□□□□ -0.45
TRAPPC4-213ENST00000533149 GSDMAQ96QA5 445 aa12.24□□□□□ -0.45
TRAPPC4-213ENST00000533149 TRIM9Q9C026 710 aa12.24□□□□□ -0.45
TRAPPC4-213ENST00000533149 RBSNQ9H1K0 784 aa12.24□□□□□ -0.45
TRAPPC4-213ENST00000533149 C2orf40Q9H1Z8 148 aa12.24□□□□□ -0.45
TRAPPC4-213ENST00000533149 SLC38A7Q9NVC3 462 aa12.24□□□□□ -0.45
TRAPPC4-213ENST00000533149 ANO10Q9NW15 660 aa12.24□□□□□ -0.45
TRAPPC4-213ENST00000533149 EVLQ9UI08 416 aaPredicted RBP12.24□□□□□ -0.45
TRAPPC4-213ENST00000533149 GOLGA6L3A6NEY3 463 aa12.23□□□□□ -0.45
TRAPPC4-213ENST00000533149 UPK3BL1B0FP48 263 aa12.23□□□□□ -0.45
TRAPPC4-213ENST00000533149 UPK3BL2E5RIL1 263 aa12.23□□□□□ -0.45
TRAPPC4-213ENST00000533149 MEFVO15553 781 aaPredicted RBP12.23□□□□□ -0.45
TRAPPC4-213ENST00000533149 RNF40O75150 1001 aa12.23□□□□□ -0.45
TRAPPC4-213ENST00000533149 LYPLA2O95372 231 aa12.23□□□□□ -0.45
TRAPPC4-213ENST00000533149 CPB1P15086 417 aa12.23□□□□□ -0.45
TRAPPC4-213ENST00000533149 CYP11B2P19099 503 aa12.23□□□□□ -0.45
TRAPPC4-213ENST00000533149 DRD1P21728 446 aa12.23□□□□□ -0.45
TRAPPC4-213ENST00000533149 WEE1P30291 646 aa12.23□□□□□ -0.45
TRAPPC4-213ENST00000533149 EPHB3P54753 998 aa12.23□□□□□ -0.45
TRAPPC4-213ENST00000533149 MORC3Q14149 939 aa12.23□□□□□ -0.45
TRAPPC4-213ENST00000533149 MAPK6Q16659 721 aa12.23□□□□□ -0.45
TRAPPC4-213ENST00000533149 ANO6Q4KMQ2 910 aa12.23□□□□□ -0.45
TRAPPC4-213ENST00000533149 GPBP1Q86WP2 473 aa12.23□□□□□ -0.45
TRAPPC4-213ENST00000533149 TMC8Q8IU68 726 aa12.23□□□□□ -0.45
TRAPPC4-213ENST00000533149 GPIHBP1Q8IV16 184 aa12.23□□□□□ -0.45
TRAPPC4-213ENST00000533149 APPL2Q8NEU8 664 aa12.23□□□□□ -0.45
TRAPPC4-213ENST00000533149 LRRC3Q9BY71 257 aa12.23□□□□□ -0.45
TRAPPC4-213ENST00000533149 GOLGA2P5Q9HBQ8 144 aa12.23□□□□□ -0.45
TRAPPC4-213ENST00000533149 YIPF1Q9Y548 306 aa12.23□□□□□ -0.45
TRAPPC4-213ENST00000533149 NUB1Q9Y5A7 615 aa12.23□□□□□ -0.45
TRAPPC4-213ENST00000533149 ARID2Q68CP9 1835 aa12.23□□□□□ -0.45
TRAPPC4-213ENST00000533149 SETXQ7Z333 2677 aaKnown RBP12.23□□□□□ -0.45
TRAPPC4-213ENST00000533149 EML5Q05BV3 1969 aa12.23□□□□□ -0.45
TRAPPC4-213ENST00000533149 SMIM28A0A1B0GU29 152 aa12.22□□□□□ -0.45
TRAPPC4-213ENST00000533149 SPAARA0A1B0GVQ0 90 aa12.22□□□□□ -0.45
TRAPPC4-213ENST00000533149 TTLL13PA6NNM8 815 aa12.22□□□□□ -0.45
TRAPPC4-213ENST00000533149 PATE3B3GLJ2 98 aa12.22□□□□□ -0.45
TRAPPC4-213ENST00000533149 ACKR2O00590 384 aa12.22□□□□□ -0.45
TRAPPC4-213ENST00000533149 PODXLO00592 558 aa12.22□□□□□ -0.45
TRAPPC4-213ENST00000533149 KLRC4O43908 158 aa12.22□□□□□ -0.45
TRAPPC4-213ENST00000533149 XRCC6P12956 609 aaKnown RBP eCLIP12.22□□□□□ -0.45
TRAPPC4-213ENST00000533149 ALDH1A3P47895 512 aa12.22□□□□□ -0.45
TRAPPC4-213ENST00000533149 ASIC1P78348 528 aa12.22□□□□□ -0.45
TRAPPC4-213ENST00000533149 KCNB1Q14721 858 aa12.22□□□□□ -0.45
TRAPPC4-213ENST00000533149 ZNF423Q2M1K9 1284 aa12.22□□□□□ -0.45
TRAPPC4-213ENST00000533149 KMT5BQ4FZB7 885 aa12.22□□□□□ -0.45
TRAPPC4-213ENST00000533149 ARSHQ5FYA8 562 aa12.22□□□□□ -0.45
TRAPPC4-213ENST00000533149 STXBP5Q5T5C0 1151 aa12.22□□□□□ -0.45
TRAPPC4-213ENST00000533149 CNNM4Q6P4Q7 775 aa12.22□□□□□ -0.45
TRAPPC4-213ENST00000533149 RNF19BQ6ZMZ0 732 aa12.22□□□□□ -0.45
TRAPPC4-213ENST00000533149 DYMQ7RTS9 669 aa12.22□□□□□ -0.45
TRAPPC4-213ENST00000533149 TRIML1Q8N9V2 468 aa12.22□□□□□ -0.45
TRAPPC4-213ENST00000533149 DDX12PQ92771 950 aa12.22□□□□□ -0.45
TRAPPC4-213ENST00000533149 ACDQ96AP0 544 aa12.22□□□□□ -0.45
TRAPPC4-213ENST00000533149 NUSAP1Q9BXS6 441 aaKnown RBP12.22□□□□□ -0.45
TRAPPC4-213ENST00000533149 OXCT2Q9BYC2 517 aaPredicted RBP12.22□□□□□ -0.45
TRAPPC4-213ENST00000533149 DNAJC25Q9H1X3 360 aa12.22□□□□□ -0.45
TRAPPC4-213ENST00000533149 BHMT2Q9H2M3 363 aa12.22□□□□□ -0.45
TRAPPC4-213ENST00000533149 ATXN3LQ9H3M9 355 aa12.22□□□□□ -0.45
TRAPPC4-213ENST00000533149 RMND1Q9NWS8 449 aa12.22□□□□□ -0.45
TRAPPC4-213ENST00000533149 ASB3Q9Y575 518 aa12.22□□□□□ -0.45
TRAPPC4-213ENST00000533149 NPHP3-ACAD11A0A0J9YXS1 232 aa12.21□□□□□ -0.45
TRAPPC4-213ENST00000533149 PVALEFA0A1B0GWK0 134 aa12.21□□□□□ -0.45
TRAPPC4-213ENST00000533149 ARHGEF35A5YM69 484 aa12.21□□□□□ -0.45
TRAPPC4-213ENST00000533149 EGFP01133 1207 aa12.21□□□□□ -0.45
TRAPPC4-213ENST00000533149 BMP6P22004 513 aa12.21□□□□□ -0.45
TRAPPC4-213ENST00000533149 RPL9P32969 192 aaKnown RBP12.21□□□□□ -0.45
TRAPPC4-213ENST00000533149 RARRES1P49788 294 aa12.21□□□□□ -0.45
TRAPPC4-213ENST00000533149 DGKEP52429 567 aa12.21□□□□□ -0.45
TRAPPC4-213ENST00000533149 YARSP54577 528 aaKnown RBP12.21□□□□□ -0.45
TRAPPC4-213ENST00000533149 SCAPQ12770 1279 aa12.21□□□□□ -0.45
TRAPPC4-213ENST00000533149 SEMA3BQ13214 749 aa12.21□□□□□ -0.45
TRAPPC4-213ENST00000533149 RUNX3Q13761 415 aa12.21□□□□□ -0.45
TRAPPC4-213ENST00000533149 HNRNPDQ14103 355 aaKnown RBP12.21□□□□□ -0.45
TRAPPC4-213ENST00000533149 DMC1Q14565 340 aa12.21□□□□□ -0.45
TRAPPC4-213ENST00000533149 DPCR1Q3MIW9 517 aa12.21□□□□□ -0.45
TRAPPC4-213ENST00000533149 TRIM61Q5EBN2 209 aa12.21□□□□□ -0.45
TRAPPC4-213ENST00000533149 GPR158Q5T848 1215 aa12.21□□□□□ -0.45
TRAPPC4-213ENST00000533149 RINT1Q6NUQ1 792 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 427.6 ms