RNA–Protein interactions for RNA: ENST00000533011.5

CHMP4A-206, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-206ENST00000533011 ZNF461Q8TAF7 563 aa10.98□□□□□ -0.65
CHMP4A-206ENST00000533011 CACTINQ8WUQ7 758 aaKnown RBP10.98□□□□□ -0.65
CHMP4A-206ENST00000533011 FAM3CQ92520 227 aa10.98□□□□□ -0.65
CHMP4A-206ENST00000533011 KXD1Q9BQD3 176 aa10.98□□□□□ -0.65
CHMP4A-206ENST00000533011 ARRDC1-AS1Q9H2J1 176 aa10.98□□□□□ -0.65
CHMP4A-206ENST00000533011 VPS45Q9NRW7 570 aa10.98□□□□□ -0.65
CHMP4A-206ENST00000533011 AGPAT3Q9NRZ7 376 aa10.98□□□□□ -0.65
CHMP4A-206ENST00000533011 HSPBP1Q9NZL4 362 aa10.98□□□□□ -0.65
CHMP4A-206ENST00000533011 FBXW11Q9UKB1 542 aa10.98□□□□□ -0.65
CHMP4A-206ENST00000533011 MAST4O15021 2626 aa10.98□□□□□ -0.65
CHMP4A-206ENST00000533011 F5P12259 2224 aa10.97□□□□□ -0.65
CHMP4A-206ENST00000533011 CCDC163A0A0D9SF12 145 aa10.97□□□□□ -0.65
CHMP4A-206ENST00000533011 ARHGEF37A1IGU5 675 aa10.97□□□□□ -0.65
CHMP4A-206ENST00000533011 CHURC1-FNTBB4DL54 471 aa10.97□□□□□ -0.65
CHMP4A-206ENST00000533011 PPEF2O14830 753 aa10.97□□□□□ -0.65
CHMP4A-206ENST00000533011 AXIN1O15169 862 aa10.97□□□□□ -0.65
CHMP4A-206ENST00000533011 CLIC2O15247 247 aa10.97□□□□□ -0.65
CHMP4A-206ENST00000533011 OAZ2O95190 189 aa10.97□□□□□ -0.65
CHMP4A-206ENST00000533011 EPN2O95208 641 aa10.97□□□□□ -0.65
CHMP4A-206ENST00000533011 PRR29P0C7W0 189 aa10.97□□□□□ -0.65
CHMP4A-206ENST00000533011 ANP32AP39687 249 aaKnown RBP10.97□□□□□ -0.65
CHMP4A-206ENST00000533011 FNTBP49356 437 aa10.97□□□□□ -0.65
CHMP4A-206ENST00000533011 WNT7BP56706 349 aa10.97□□□□□ -0.65
CHMP4A-206ENST00000533011 TFAMQ00059 246 aaKnown RBP10.97□□□□□ -0.65
CHMP4A-206ENST00000533011 ROR1Q01973 937 aa10.97□□□□□ -0.65
CHMP4A-206ENST00000533011 YWHAHQ04917 246 aaPredicted RBP10.97□□□□□ -0.65
CHMP4A-206ENST00000533011 DPYDQ12882 1025 aa10.97□□□□□ -0.65
CHMP4A-206ENST00000533011 FOXC1Q12948 553 aa10.97□□□□□ -0.65
CHMP4A-206ENST00000533011 SF3A2Q15428 464 aaKnown RBP10.97□□□□□ -0.65
CHMP4A-206ENST00000533011 CTXN3Q4LDR2 81 aa10.97□□□□□ -0.65
CHMP4A-206ENST00000533011 PLA2G2CQ5R387 149 aa10.97□□□□□ -0.65
CHMP4A-206ENST00000533011 RNF43Q68DV7 783 aa10.97□□□□□ -0.65
CHMP4A-206ENST00000533011 ZNF280DQ6N043 979 aa10.97□□□□□ -0.65
CHMP4A-206ENST00000533011 USP37Q86T82 979 aa10.97□□□□□ -0.65
CHMP4A-206ENST00000533011 WDR5BQ86VZ2 330 aa10.97□□□□□ -0.65
CHMP4A-206ENST00000533011 CBWD2Q8IUF1 395 aa10.97□□□□□ -0.65
CHMP4A-206ENST00000533011 C12orf56Q8IXR9 622 aa10.97□□□□□ -0.65
CHMP4A-206ENST00000533011 FMR1NBQ8N0W7 255 aaPredicted RBP10.97□□□□□ -0.65
CHMP4A-206ENST00000533011 XXYLT1Q8NBI6 393 aa10.97□□□□□ -0.65
CHMP4A-206ENST00000533011 KIAA0895Q8NCT3 520 aa10.97□□□□□ -0.65
CHMP4A-206ENST00000533011 ST13P5Q8NFI4 369 aaPredicted RBP10.97□□□□□ -0.65
CHMP4A-206ENST00000533011 GOLGA5Q8TBA6 731 aa10.97□□□□□ -0.65
CHMP4A-206ENST00000533011 SENP8Q96LD8 212 aa10.97□□□□□ -0.65
CHMP4A-206ENST00000533011 OXCT2Q9BYC2 517 aaPredicted RBP10.97□□□□□ -0.65
CHMP4A-206ENST00000533011 BRD9Q9H8M2 597 aa10.97□□□□□ -0.65
CHMP4A-206ENST00000533011 PDE11AQ9HCR9 933 aa10.97□□□□□ -0.65
CHMP4A-206ENST00000533011 AVENQ9NQS1 362 aaPredicted RBP10.97□□□□□ -0.65
CHMP4A-206ENST00000533011 FBXL5Q9UKA1 691 aa10.97□□□□□ -0.65
CHMP4A-206ENST00000533011 NDRG2Q9UN36 371 aaKnown RBP10.97□□□□□ -0.65
CHMP4A-206ENST00000533011 NEUROG3Q9Y4Z2 214 aa10.97□□□□□ -0.65
CHMP4A-206ENST00000533011 HELZ2Q9BYK8 2649 aaKnown RBP10.96□□□□□ -0.65
CHMP4A-206ENST00000533011 SHISA7A6NL88 538 aa10.96□□□□□ -0.65
CHMP4A-206ENST00000533011 EIF4E1BA6NMX2 242 aaKnown RBP10.96□□□□□ -0.65
CHMP4A-206ENST00000533011 AKAP3O75969 853 aa10.96□□□□□ -0.65
CHMP4A-206ENST00000533011 ABLIM3O94929 683 aa10.96□□□□□ -0.65
CHMP4A-206ENST00000533011 RHOBTB3O94955 611 aa10.96□□□□□ -0.65
CHMP4A-206ENST00000533011 KIF20AO95235 890 aa10.96□□□□□ -0.65
CHMP4A-206ENST00000533011 C8AP07357 584 aa10.96□□□□□ -0.65
CHMP4A-206ENST00000533011 ODC1P11926 461 aa10.96□□□□□ -0.65
CHMP4A-206ENST00000533011 TYMPP19971 482 aa10.96□□□□□ -0.65
CHMP4A-206ENST00000533011 CSRP1P21291 193 aaKnown RBP10.96□□□□□ -0.65
CHMP4A-206ENST00000533011 RAP1GAPP47736 663 aa10.96□□□□□ -0.65
CHMP4A-206ENST00000533011 TAF6P49848 677 aa10.96□□□□□ -0.65
CHMP4A-206ENST00000533011 CYP2J2P51589 502 aa10.96□□□□□ -0.65
CHMP4A-206ENST00000533011 ARPP19P56211 112 aa10.96□□□□□ -0.65
CHMP4A-206ENST00000533011 SATB1Q01826 763 aa10.96□□□□□ -0.65
CHMP4A-206ENST00000533011 FAM160A1Q05DH4 1040 aa10.96□□□□□ -0.65
CHMP4A-206ENST00000533011 ZNF252P-AS1Q0IIN9 211 aa10.96□□□□□ -0.65
CHMP4A-206ENST00000533011 SNRNP35Q16560 246 aaKnown RBP10.96□□□□□ -0.65
CHMP4A-206ENST00000533011 SOWAHCQ53LP3 525 aaPredicted RBP10.96□□□□□ -0.65
CHMP4A-206ENST00000533011 TPGS2Q68CL5 300 aa10.96□□□□□ -0.65
CHMP4A-206ENST00000533011 NPAS3Q8IXF0 933 aa10.96□□□□□ -0.65
CHMP4A-206ENST00000533011 RDH13Q8NBN7 331 aa10.96□□□□□ -0.65
CHMP4A-206ENST00000533011 ENGASEQ8NFI3 743 aa10.96□□□□□ -0.65
CHMP4A-206ENST00000533011 TRMT61BQ9BVS5 477 aaKnown RBP10.96□□□□□ -0.65
CHMP4A-206ENST00000533011 SCNM1Q9BWG6 230 aa10.96□□□□□ -0.65
CHMP4A-206ENST00000533011 INTS13Q9NVM9 706 aa10.96□□□□□ -0.65
CHMP4A-206ENST00000533011 TIMM13Q9Y5L4 95 aaPredicted RBP10.96□□□□□ -0.65
CHMP4A-206ENST00000533011 NBEAQ8NFP9 2946 aa10.95□□□□□ -0.66
CHMP4A-206ENST00000533011 WDR27A2RRH5 827 aa10.95□□□□□ -0.66
CHMP4A-206ENST00000533011 KPNA7A9QM74 516 aa10.95□□□□□ -0.66
CHMP4A-206ENST00000533011 K7ESF4 209 aa10.95□□□□□ -0.66
CHMP4A-206ENST00000533011 PDXKO00764 312 aa10.95□□□□□ -0.66
CHMP4A-206ENST00000533011 MICAL2O94851 1124 aa10.95□□□□□ -0.66
CHMP4A-206ENST00000533011 ITGB3P05106 788 aa10.95□□□□□ -0.66
CHMP4A-206ENST00000533011 TMEM191BP0C7N4 346 aa10.95□□□□□ -0.66
CHMP4A-206ENST00000533011 CHRNB1P11230 501 aa10.95□□□□□ -0.66
CHMP4A-206ENST00000533011 CPB1P15086 417 aa10.95□□□□□ -0.66
CHMP4A-206ENST00000533011 ATF2P15336 505 aa10.95□□□□□ -0.66
CHMP4A-206ENST00000533011 ELF1P32519 619 aa10.95□□□□□ -0.66
CHMP4A-206ENST00000533011 RDXP35241 583 aaKnown RBP10.95□□□□□ -0.66
CHMP4A-206ENST00000533011 PNPLA4P41247 253 aa10.95□□□□□ -0.66
CHMP4A-206ENST00000533011 KCNB1Q14721 858 aa10.95□□□□□ -0.66
CHMP4A-206ENST00000533011 SV2CQ496J9 727 aa10.95□□□□□ -0.66
CHMP4A-206ENST00000533011 PABPC1LQ4VXU2 614 aaKnown RBP10.95□□□□□ -0.66
CHMP4A-206ENST00000533011 DGKKQ5KSL6 1271 aa10.95□□□□□ -0.66
CHMP4A-206ENST00000533011 OVOS1Q6IE37 1185 aa10.95□□□□□ -0.66
CHMP4A-206ENST00000533011 WDR49Q8IV35 697 aa10.95□□□□□ -0.66
CHMP4A-206ENST00000533011 SYNPOQ8N3V7 929 aa10.95□□□□□ -0.66
CHMP4A-206ENST00000533011 CSGALNACT2Q8N6G5 542 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms