RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 ETFBP38117 255 aa11.81□□□□□ -0.52
PTPRK-221ENST00000532331 CTCFP49711 727 aaPredicted RBP11.81□□□□□ -0.52
PTPRK-221ENST00000532331 MDM2Q00987 491 aaPredicted RBP11.81□□□□□ -0.52
PTPRK-221ENST00000532331 EFEMP1Q12805 493 aa11.81□□□□□ -0.52
PTPRK-221ENST00000532331 IMPG1Q17R60 797 aa11.81□□□□□ -0.52
PTPRK-221ENST00000532331 ZNF212Q9UDV6 495 aa11.81□□□□□ -0.52
PTPRK-221ENST00000532331 SLIT3O75094 1523 aa11.81□□□□□ -0.52
PTPRK-221ENST00000532331 SLC12A8A0AV02 714 aa11.81□□□□□ -0.52
PTPRK-221ENST00000532331 CFAP99D6REC4 459 aa11.81□□□□□ -0.52
PTPRK-221ENST00000532331 M0QYT0 321 aa11.81□□□□□ -0.52
PTPRK-221ENST00000532331 ARSEP51690 589 aa11.81□□□□□ -0.52
PTPRK-221ENST00000532331 APLP1P51693 650 aa11.81□□□□□ -0.52
PTPRK-221ENST00000532331 GIT2Q14161 759 aa11.81□□□□□ -0.52
PTPRK-221ENST00000532331 SZRD1Q7Z422 152 aa11.81□□□□□ -0.52
PTPRK-221ENST00000532331 VSIG10LQ86VR7 867 aa11.81□□□□□ -0.52
PTPRK-221ENST00000532331 CYFIP2Q96F07 1278 aa11.81□□□□□ -0.52
PTPRK-221ENST00000532331 CCDC138Q96M89 665 aa11.81□□□□□ -0.52
PTPRK-221ENST00000532331 CIPCQ9C0C6 399 aa11.81□□□□□ -0.52
PTPRK-221ENST00000532331 STN1Q9H668 368 aaKnown RBP11.81□□□□□ -0.52
PTPRK-221ENST00000532331 METTL5Q9NRN9 209 aaKnown RBP11.81□□□□□ -0.52
PTPRK-221ENST00000532331 ATP1A1P05023 1023 aaKnown RBP11.81□□□□□ -0.52
PTPRK-221ENST00000532331 BCAT1P54687 386 aa11.81□□□□□ -0.52
PTPRK-221ENST00000532331 MAP3K7CLP57077 242 aa11.81□□□□□ -0.52
PTPRK-221ENST00000532331 MAGOHP61326 146 aaKnown RBP11.81□□□□□ -0.52
PTPRK-221ENST00000532331 HABP4Q5JVS0 413 aaKnown RBP11.81□□□□□ -0.52
PTPRK-221ENST00000532331 ATL2Q8NHH9 583 aa11.81□□□□□ -0.52
PTPRK-221ENST00000532331 CYP2W1Q8TAV3 490 aa11.81□□□□□ -0.52
PTPRK-221ENST00000532331 TRIM33Q9UPN9 1127 aa11.81□□□□□ -0.52
PTPRK-221ENST00000532331 MRC1P22897 1456 aa11.81□□□□□ -0.52
PTPRK-221ENST00000532331 KCNN4O15554 427 aa11.81□□□□□ -0.52
PTPRK-221ENST00000532331 KDM1AO60341 852 aa11.81□□□□□ -0.52
PTPRK-221ENST00000532331 FBXO21O94952 628 aa11.81□□□□□ -0.52
PTPRK-221ENST00000532331 FMR1Q06787 632 aaKnown RBP eCLIP11.81□□□□□ -0.52
PTPRK-221ENST00000532331 CCNYL1Q8N7R7 359 aa11.81□□□□□ -0.52
PTPRK-221ENST00000532331 YIPF2Q9BWQ6 316 aa11.81□□□□□ -0.52
PTPRK-221ENST00000532331 TIMM13Q9Y5L4 95 aaPredicted RBP11.81□□□□□ -0.52
PTPRK-221ENST00000532331 ESYT3A0FGR9 886 aa11.81□□□□□ -0.52
PTPRK-221ENST00000532331 FAM86B1E9PN63 330 aa11.81□□□□□ -0.52
PTPRK-221ENST00000532331 FAM86B2P0C5J1 330 aa11.81□□□□□ -0.52
PTPRK-221ENST00000532331 WEE1P30291 646 aa11.81□□□□□ -0.52
PTPRK-221ENST00000532331 GGCXP38435 758 aa11.81□□□□□ -0.52
PTPRK-221ENST00000532331 TUFMP49411 452 aaKnown RBP11.81□□□□□ -0.52
PTPRK-221ENST00000532331 ATXN3P54252 364 aaPredicted RBP11.81□□□□□ -0.52
PTPRK-221ENST00000532331 CCDC149Q6ZUS6 474 aa11.81□□□□□ -0.52
PTPRK-221ENST00000532331 SYDE1Q6ZW31 735 aaPredicted RBP11.81□□□□□ -0.52
PTPRK-221ENST00000532331 SYT15Q9BQS2 421 aa11.81□□□□□ -0.52
PTPRK-221ENST00000532331 KLHL11Q9NVR0 708 aa11.81□□□□□ -0.52
PTPRK-221ENST00000532331 ACKR2O00590 384 aa11.8□□□□□ -0.52
PTPRK-221ENST00000532331 ADCY6O43306 1168 aa11.8□□□□□ -0.52
PTPRK-221ENST00000532331 IFNA8P32881 189 aa11.8□□□□□ -0.52
PTPRK-221ENST00000532331 ESRRGP62508 458 aa11.8□□□□□ -0.52
PTPRK-221ENST00000532331 FAM47EQ6ZV65 393 aa11.8□□□□□ -0.52
PTPRK-221ENST00000532331 GPR63Q9BZJ6 419 aa11.8□□□□□ -0.52
PTPRK-221ENST00000532331 CLCA2Q9UQC9 943 aa11.8□□□□□ -0.52
PTPRK-221ENST00000532331 FOXP2O15409 715 aa11.8□□□□□ -0.52
PTPRK-221ENST00000532331 PDCLQ13371 301 aa11.8□□□□□ -0.52
PTPRK-221ENST00000532331 ORC1Q13415 861 aa11.8□□□□□ -0.52
PTPRK-221ENST00000532331 PDK1Q15118 436 aa11.8□□□□□ -0.52
PTPRK-221ENST00000532331 TRIM48Q8IWZ4 208 aa11.8□□□□□ -0.52
PTPRK-221ENST00000532331 GSPT2Q8IYD1 628 aaKnown RBP11.8□□□□□ -0.52
PTPRK-221ENST00000532331 LRRC43Q8N309 656 aa11.8□□□□□ -0.52
PTPRK-221ENST00000532331 AGAP3Q96P47 875 aa11.8□□□□□ -0.52
PTPRK-221ENST00000532331 FHOD1Q9Y613 1164 aa11.8□□□□□ -0.52
PTPRK-221ENST00000532331 NFASCO94856 1347 aa11.8□□□□□ -0.52
PTPRK-221ENST00000532331 UMODL1Q5DID0 1318 aa11.8□□□□□ -0.52
PTPRK-221ENST00000532331 F9P00740 461 aa11.8□□□□□ -0.52
PTPRK-221ENST00000532331 BRAFP15056 766 aa11.8□□□□□ -0.52
PTPRK-221ENST00000532331 INPP1P49441 399 aa11.8□□□□□ -0.52
PTPRK-221ENST00000532331 CDR2Q01850 454 aa11.8□□□□□ -0.52
PTPRK-221ENST00000532331 PDE1CQ14123 709 aaPredicted RBP11.8□□□□□ -0.52
PTPRK-221ENST00000532331 HIBCHQ6NVY1 386 aaPredicted RBP11.8□□□□□ -0.52
PTPRK-221ENST00000532331 SLC35G2Q8TBE7 412 aa11.8□□□□□ -0.52
PTPRK-221ENST00000532331 FBXO44Q9H4M3 255 aa11.8□□□□□ -0.52
PTPRK-221ENST00000532331 MRFAP1Q9Y605 127 aa11.8□□□□□ -0.52
PTPRK-221ENST00000532331 PPFIA2O75334 1257 aa11.8□□□□□ -0.52
PTPRK-221ENST00000532331 GNRH1P01148 92 aa11.8□□□□□ -0.52
PTPRK-221ENST00000532331 EPHB2P29323 1055 aa11.8□□□□□ -0.52
PTPRK-221ENST00000532331 RARRES1P49788 294 aa11.8□□□□□ -0.52
PTPRK-221ENST00000532331 PPP2R2AP63151 447 aa11.8□□□□□ -0.52
PTPRK-221ENST00000532331 ITGA7Q13683 1181 aa11.8□□□□□ -0.52
PTPRK-221ENST00000532331 OTOP1Q7RTM1 612 aa11.8□□□□□ -0.52
PTPRK-221ENST00000532331 DACT3Q96B18 629 aaPredicted RBP11.8□□□□□ -0.52
PTPRK-221ENST00000532331 XPO6Q96QU8 1125 aaKnown RBP11.8□□□□□ -0.52
PTPRK-221ENST00000532331 CELF4Q9BZC1 486 aaKnown RBP11.8□□□□□ -0.52
PTPRK-221ENST00000532331 CYP3A43Q9HB55 503 aa11.8□□□□□ -0.52
PTPRK-221ENST00000532331 L3MBTL1Q9Y468 752 aa11.8□□□□□ -0.52
PTPRK-221ENST00000532331 CNTNAP2Q9UHC6 1331 aa11.8□□□□□ -0.52
PTPRK-221ENST00000532331 FAM47DPA6NHR8 397 aa11.79□□□□□ -0.52
PTPRK-221ENST00000532331 USP27XA6NNY8 438 aa11.79□□□□□ -0.52
PTPRK-221ENST00000532331 LZTS3O60299 673 aaPredicted RBP11.79□□□□□ -0.52
PTPRK-221ENST00000532331 SYF2O95926 243 aaKnown RBP11.79□□□□□ -0.52
PTPRK-221ENST00000532331 HIST1H2AGP0C0S8 130 aaPredicted RBP11.79□□□□□ -0.52
PTPRK-221ENST00000532331 SLC9A1P19634 815 aa11.79□□□□□ -0.52
PTPRK-221ENST00000532331 HIST1H2ADP20671 130 aa11.79□□□□□ -0.52
PTPRK-221ENST00000532331 NDUFV1P49821 464 aa11.79□□□□□ -0.52
PTPRK-221ENST00000532331 GALCP54803 685 aa11.79□□□□□ -0.52
PTPRK-221ENST00000532331 PCSK7Q16549 785 aa11.79□□□□□ -0.52
PTPRK-221ENST00000532331 P3H1Q32P28 736 aa11.79□□□□□ -0.52
PTPRK-221ENST00000532331 KRT80Q6KB66 452 aa11.79□□□□□ -0.52
PTPRK-221ENST00000532331 USP13Q92995 863 aaPredicted RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms