RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-222ENST00000531967 CRLF2Q9HC73 371 aa5.61□□□□□ -1.51
ECHDC1-222ENST00000531967 TM9SF3Q9HD45 589 aa5.61□□□□□ -1.51
ECHDC1-222ENST00000531967 SLC35C2Q9NQQ7 365 aa5.61□□□□□ -1.51
ECHDC1-222ENST00000531967 ACSS2Q9NR19 701 aa5.61□□□□□ -1.51
ECHDC1-222ENST00000531967 LMBRD1Q9NUN5 540 aa5.61□□□□□ -1.51
ECHDC1-222ENST00000531967 HCFC1R1Q9NWW0 138 aa5.61□□□□□ -1.51
ECHDC1-222ENST00000531967 CLIP2Q9UDT6 1046 aa5.61□□□□□ -1.51
ECHDC1-222ENST00000531967 FBXL21Q9UKT6 434 aa5.61□□□□□ -1.51
ECHDC1-222ENST00000531967 HSF4Q9ULV5 492 aa5.61□□□□□ -1.51
ECHDC1-222ENST00000531967 AURKCQ9UQB9 309 aa5.61□□□□□ -1.51
ECHDC1-222ENST00000531967 MRPL11Q9Y3B7 192 aaKnown RBP5.61□□□□□ -1.51
ECHDC1-222ENST00000531967 PCDHB1Q9Y5F3 818 aa5.61□□□□□ -1.51
ECHDC1-222ENST00000531967 ABCC8Q09428 1581 aa5.6□□□□□ -1.51
ECHDC1-222ENST00000531967 NSD2O96028 1365 aa5.6□□□□□ -1.51
ECHDC1-222ENST00000531967 TNIKQ9UKE5 1360 aa5.6□□□□□ -1.51
ECHDC1-222ENST00000531967 MT-ND5P03915 603 aa5.6□□□□□ -1.51
ECHDC1-222ENST00000531967 CNPP09543 421 aaKnown RBP5.6□□□□□ -1.51
ECHDC1-222ENST00000531967 GABRB3P28472 473 aa5.6□□□□□ -1.51
ECHDC1-222ENST00000531967 PBX2P40425 430 aa5.6□□□□□ -1.51
ECHDC1-222ENST00000531967 IL15P40933 162 aaPredicted RBP5.6□□□□□ -1.51
ECHDC1-222ENST00000531967 ACAA2P42765 397 aaKnown RBP5.6□□□□□ -1.51
ECHDC1-222ENST00000531967 WASP42768 502 aa5.6□□□□□ -1.51
ECHDC1-222ENST00000531967 CENPAP49450 140 aa5.6□□□□□ -1.51
ECHDC1-222ENST00000531967 CPT1AP50416 773 aa5.6□□□□□ -1.51
ECHDC1-222ENST00000531967 HDAC4P56524 1084 aa5.6□□□□□ -1.51
ECHDC1-222ENST00000531967 NSUN2Q08J23 767 aaKnown RBP eCLIP5.6□□□□□ -1.51
ECHDC1-222ENST00000531967 HSP90AA5PQ58FG0 334 aa5.6□□□□□ -1.51
ECHDC1-222ENST00000531967 MPP7Q5T2T1 576 aa5.6□□□□□ -1.51
ECHDC1-222ENST00000531967 RRAGBQ5VZM2 374 aa5.6□□□□□ -1.51
ECHDC1-222ENST00000531967 ZNF574Q6ZN55 896 aaPredicted RBP5.6□□□□□ -1.51
ECHDC1-222ENST00000531967 HFE2Q6ZVN8 426 aa5.6□□□□□ -1.51
ECHDC1-222ENST00000531967 MTERF4Q7Z6M4 381 aaKnown RBP5.6□□□□□ -1.51
ECHDC1-222ENST00000531967 GALNT4Q8N4A0 578 aa5.6□□□□□ -1.51
ECHDC1-222ENST00000531967 FAM71DQ8N9W8 422 aa5.6□□□□□ -1.51
ECHDC1-222ENST00000531967 SP7Q8TDD2 431 aaPredicted RBP5.6□□□□□ -1.51
ECHDC1-222ENST00000531967 C17orf50Q8WW18 174 aa5.6□□□□□ -1.51
ECHDC1-222ENST00000531967 RABGGTAQ92696 567 aa5.6□□□□□ -1.51
ECHDC1-222ENST00000531967 RMDN1Q96DB5 314 aa5.6□□□□□ -1.51
ECHDC1-222ENST00000531967 DCBLD2Q96PD2 775 aa5.6□□□□□ -1.51
ECHDC1-222ENST00000531967 NOD2Q9HC29 1040 aa5.6□□□□□ -1.51
ECHDC1-222ENST00000531967 RGL1Q9NZL6 768 aa5.6□□□□□ -1.51
ECHDC1-222ENST00000531967 RNF112Q9ULX5 631 aa5.6□□□□□ -1.51
ECHDC1-222ENST00000531967 ST14Q9Y5Y6 855 aa5.6□□□□□ -1.51
ECHDC1-222ENST00000531967 SLC30A1Q9Y6M5 507 aa5.6□□□□□ -1.51
ECHDC1-222ENST00000531967 MYPNQ86TC9 1320 aa5.6□□□□□ -1.51
ECHDC1-222ENST00000531967 CEP162Q5TB80 1403 aa5.6□□□□□ -1.51
ECHDC1-222ENST00000531967 RNF103-CHMP3A0A140T963 221 aa5.6□□□□□ -1.51
ECHDC1-222ENST00000531967 LRRC72A6NJI9 287 aa5.6□□□□□ -1.51
ECHDC1-222ENST00000531967 TK2O00142 265 aa5.6□□□□□ -1.51
ECHDC1-222ENST00000531967 RNF103O00237 685 aa5.6□□□□□ -1.51
ECHDC1-222ENST00000531967 GCNT3O95395 438 aa5.6□□□□□ -1.51
ECHDC1-222ENST00000531967 TPOP07202 933 aa5.6□□□□□ -1.51
ECHDC1-222ENST00000531967 HMOX1P09601 288 aa5.6□□□□□ -1.51
ECHDC1-222ENST00000531967 CCDC172P0C7W6 258 aa5.6□□□□□ -1.51
ECHDC1-222ENST00000531967 KRT15P19012 456 aa5.6□□□□□ -1.51
ECHDC1-222ENST00000531967 HOXA10P31260 410 aaPredicted RBP5.6□□□□□ -1.51
ECHDC1-222ENST00000531967 GRK3P35626 688 aa5.6□□□□□ -1.51
ECHDC1-222ENST00000531967 NT5C2P49902 561 aa5.6□□□□□ -1.51
ECHDC1-222ENST00000531967 RARSP54136 660 aaKnown RBP5.6□□□□□ -1.51
ECHDC1-222ENST00000531967 KCNJ10P78508 379 aa5.6□□□□□ -1.51
ECHDC1-222ENST00000531967 CDK17Q00537 523 aa5.6□□□□□ -1.51
ECHDC1-222ENST00000531967 DCTN2Q13561 401 aaKnown RBP5.6□□□□□ -1.51
ECHDC1-222ENST00000531967 SYCP1Q15431 976 aa5.6□□□□□ -1.51
ECHDC1-222ENST00000531967 SEC23BQ15437 767 aa5.6□□□□□ -1.51
ECHDC1-222ENST00000531967 HHIPL2Q6UWX4 724 aa5.6□□□□□ -1.51
ECHDC1-222ENST00000531967 ANKS1BQ7Z6G8 1248 aa5.6□□□□□ -1.51
ECHDC1-222ENST00000531967 ADGRG6Q86SQ4 1221 aa5.6□□□□□ -1.51
ECHDC1-222ENST00000531967 CDH24Q86UP0 819 aa5.6□□□□□ -1.51
ECHDC1-222ENST00000531967 MON1AQ86VX9 555 aa5.6□□□□□ -1.51
ECHDC1-222ENST00000531967 WDR63Q8IWG1 891 aa5.6□□□□□ -1.51
ECHDC1-222ENST00000531967 ULK2Q8IYT8 1036 aa5.6□□□□□ -1.51
ECHDC1-222ENST00000531967 CELF5Q8N6W0 485 aaKnown RBP5.6□□□□□ -1.51
ECHDC1-222ENST00000531967 KLHL23Q8NBE8 558 aa5.6□□□□□ -1.51
ECHDC1-222ENST00000531967 OR6J1Q8NGC5 347 aa5.6□□□□□ -1.51
ECHDC1-222ENST00000531967 SUN5Q8TC36 379 aa5.6□□□□□ -1.51
ECHDC1-222ENST00000531967 DPF2Q92785 391 aa5.6□□□□□ -1.51
ECHDC1-222ENST00000531967 NMD3Q96D46 503 aaKnown RBP5.6□□□□□ -1.51
ECHDC1-222ENST00000531967 ITPKCQ96DU7 683 aa5.6□□□□□ -1.51
ECHDC1-222ENST00000531967 WDR89Q96FK6 387 aaPredicted RBP5.6□□□□□ -1.51
ECHDC1-222ENST00000531967 APOPT1Q96IL0 206 aa5.6□□□□□ -1.51
ECHDC1-222ENST00000531967 MCMBPQ9BTE3 642 aa5.6□□□□□ -1.51
ECHDC1-222ENST00000531967 ATP13A1Q9HD20 1204 aa5.6□□□□□ -1.51
ECHDC1-222ENST00000531967 ANO10Q9NW15 660 aa5.6□□□□□ -1.51
ECHDC1-222ENST00000531967 FAM153AQ9UHL3 310 aa5.6□□□□□ -1.51
ECHDC1-222ENST00000531967 ADAMTS8Q9UP79 889 aa5.6□□□□□ -1.51
ECHDC1-222ENST00000531967 H7BY64 318 aa5.59□□□□□ -1.51
ECHDC1-222ENST00000531967 POLR3GO15318 223 aaPredicted RBP5.59□□□□□ -1.51
ECHDC1-222ENST00000531967 SLC25A17O43808 307 aa5.59□□□□□ -1.51
ECHDC1-222ENST00000531967 GDI1P31150 447 aa5.59□□□□□ -1.51
ECHDC1-222ENST00000531967 SOX6P35712 828 aa5.59□□□□□ -1.51
ECHDC1-222ENST00000531967 MLLT6P55198 1093 aaPredicted RBP5.59□□□□□ -1.51
ECHDC1-222ENST00000531967 KIF5AQ12840 1032 aa5.59□□□□□ -1.51
ECHDC1-222ENST00000531967 MALLQ13021 153 aa5.59□□□□□ -1.51
ECHDC1-222ENST00000531967 CAMK2DQ13557 499 aa5.59□□□□□ -1.51
ECHDC1-222ENST00000531967 MXD4Q14582 209 aaPredicted RBP5.59□□□□□ -1.51
ECHDC1-222ENST00000531967 FAM69AQ5T7M9 428 aa5.59□□□□□ -1.51
ECHDC1-222ENST00000531967 ADALQ6DHV7 355 aa5.59□□□□□ -1.51
ECHDC1-222ENST00000531967 RAB11FIP2Q7L804 512 aa5.59□□□□□ -1.51
ECHDC1-222ENST00000531967 HID1Q8IV36 788 aa5.59□□□□□ -1.51
ECHDC1-222ENST00000531967 SH2D3CQ8N5H7 860 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms