RNA–Protein interactions for RNA: ENST00000531957.1

ATM-217, Transcript of ATM serine/threonine kinase, humanhuman

TSL 4

Gene ATM, Length 537 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-217ENST00000531957 MVB12AQ96EY5 273 aa4.23□□□□□ -1.73
ATM-217ENST00000531957 SLC35A4Q96G79 324 aa4.23□□□□□ -1.73
ATM-217ENST00000531957 GPATCH3Q96I76 525 aa4.23□□□□□ -1.73
ATM-217ENST00000531957 ZNF778Q96MU6 729 aa4.23□□□□□ -1.73
ATM-217ENST00000531957 ARMT1Q9H993 441 aa4.23□□□□□ -1.73
ATM-217ENST00000531957 ARHGEF3Q9NR81 526 aa4.23□□□□□ -1.73
ATM-217ENST00000531957 SH3BP4Q9P0V3 963 aa4.23□□□□□ -1.73
ATM-217ENST00000531957 IP6K2Q9UHH9 426 aa4.23□□□□□ -1.73
ATM-217ENST00000531957 SERTAD3Q9UJW9 196 aa4.23□□□□□ -1.73
ATM-217ENST00000531957 PCDHA6Q9UN73 950 aa4.23□□□□□ -1.73
ATM-217ENST00000531957 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.23□□□□□ -1.73
ATM-217ENST00000531957 UNC5CO95185 931 aa4.22□□□□□ -1.73
ATM-217ENST00000531957 ALDH2P05091 517 aa4.22□□□□□ -1.73
ATM-217ENST00000531957 CELA2AP08217 269 aa4.22□□□□□ -1.73
ATM-217ENST00000531957 NHLRC4P0CG21 123 aaPredicted RBP4.22□□□□□ -1.73
ATM-217ENST00000531957 PF4V1P10720 104 aa4.22□□□□□ -1.73
ATM-217ENST00000531957 NDUFB7P17568 137 aa4.22□□□□□ -1.73
ATM-217ENST00000531957 LIPAP38571 399 aa4.22□□□□□ -1.73
ATM-217ENST00000531957 SOX8P57073 446 aa4.22□□□□□ -1.73
ATM-217ENST00000531957 LILRA4P59901 499 aa4.22□□□□□ -1.73
ATM-217ENST00000531957 NKX6-1P78426 367 aaPredicted RBP4.22□□□□□ -1.73
ATM-217ENST00000531957 PLAC9Q5JTB6 97 aa4.22□□□□□ -1.73
ATM-217ENST00000531957 KIAA1614Q5VZ46 1190 aa4.22□□□□□ -1.73
ATM-217ENST00000531957 ZNF551Q7Z340 670 aaPredicted RBP4.22□□□□□ -1.73
ATM-217ENST00000531957 GRAMD1CQ8IYS0 662 aa4.22□□□□□ -1.73
ATM-217ENST00000531957 BRIX1Q8TDN6 353 aaKnown RBP4.22□□□□□ -1.73
ATM-217ENST00000531957 AASDHPPTQ9NRN7 309 aa4.22□□□□□ -1.73
ATM-217ENST00000531957 SERTAD4Q9NUC0 356 aa4.22□□□□□ -1.73
ATM-217ENST00000531957 HESX1Q9UBX0 185 aa4.22□□□□□ -1.73
ATM-217ENST00000531957 ZNF70Q9UC06 446 aaPredicted RBP4.22□□□□□ -1.73
ATM-217ENST00000531957 LINC01548A6NM66 108 aa4.21□□□□□ -1.74
ATM-217ENST00000531957 TARM1B6A8C7 271 aa4.21□□□□□ -1.74
ATM-217ENST00000531957 H0YIZ8 118 aa4.21□□□□□ -1.74
ATM-217ENST00000531957 SMIM22K7EJ46 135 aa4.21□□□□□ -1.74
ATM-217ENST00000531957 NXPH3O95157 252 aa4.21□□□□□ -1.74
ATM-217ENST00000531957 KCNJ5P48544 419 aa4.21□□□□□ -1.74
ATM-217ENST00000531957 NEK2P51955 445 aa4.21□□□□□ -1.74
ATM-217ENST00000531957 ZNF267Q14586 743 aaPredicted RBP4.21□□□□□ -1.74
ATM-217ENST00000531957 SRSF7Q16629 238 aaKnown RBP eCLIP4.21□□□□□ -1.74
ATM-217ENST00000531957 PTPROQ16827 1216 aa4.21□□□□□ -1.74
ATM-217ENST00000531957 LONRF3Q496Y0 759 aa4.21□□□□□ -1.74
ATM-217ENST00000531957 TREML2Q5T2D2 321 aa4.21□□□□□ -1.74
ATM-217ENST00000531957 LCE1AQ5T7P2 110 aa4.21□□□□□ -1.74
ATM-217ENST00000531957 ARHGAP40Q5TG30 622 aa4.21□□□□□ -1.74
ATM-217ENST00000531957 ZNF366Q8N895 744 aa4.21□□□□□ -1.74
ATM-217ENST00000531957 VGLL2Q8N8G2 317 aa4.21□□□□□ -1.74
ATM-217ENST00000531957 PLBD2Q8NHP8 589 aa4.21□□□□□ -1.74
ATM-217ENST00000531957 ATRIPQ8WXE1 791 aa4.21□□□□□ -1.74
ATM-217ENST00000531957 DDX17Q92841 729 aaKnown RBP4.21□□□□□ -1.74
ATM-217ENST00000531957 HOOK2Q96ED9 719 aa4.21□□□□□ -1.74
ATM-217ENST00000531957 STAP2Q9UGK3 403 aa4.21□□□□□ -1.74
ATM-217ENST00000531957 CPA4Q9UI42 421 aa4.21□□□□□ -1.74
ATM-217ENST00000531957 SSX2IPQ9Y2D8 614 aa4.21□□□□□ -1.74
ATM-217ENST00000531957 ZNF213O14771 459 aa4.2□□□□□ -1.74
ATM-217ENST00000531957 FESP07332 822 aa4.2□□□□□ -1.74
ATM-217ENST00000531957 IL6RP08887 468 aaPredicted RBP4.2□□□□□ -1.74
ATM-217ENST00000531957 HOXB6P17509 224 aaKnown RBP4.2□□□□□ -1.74
ATM-217ENST00000531957 PXNP49023 591 aaPredicted RBP4.2□□□□□ -1.74
ATM-217ENST00000531957 LOXL3P58215 753 aa4.2□□□□□ -1.74
ATM-217ENST00000531957 GRM1Q13255 1194 aa4.2□□□□□ -1.74
ATM-217ENST00000531957 LLGL1Q15334 1064 aa4.2□□□□□ -1.74
ATM-217ENST00000531957 KHDC1LQ5JSQ8 128 aa4.2□□□□□ -1.74
ATM-217ENST00000531957 ZNF618Q5T7W0 954 aa4.2□□□□□ -1.74
ATM-217ENST00000531957 ICE2Q659A1 982 aa4.2□□□□□ -1.74
ATM-217ENST00000531957 SUMO4Q6EEV6 95 aa4.2□□□□□ -1.74
ATM-217ENST00000531957 LAYNQ6UX15 382 aa4.2□□□□□ -1.74
ATM-217ENST00000531957 SLC29A4Q7RTT9 530 aa4.2□□□□□ -1.74
ATM-217ENST00000531957 Q8N9P0 234 aaPredicted RBP4.2□□□□□ -1.74
ATM-217ENST00000531957 FANCBQ8NB91 859 aa4.2□□□□□ -1.74
ATM-217ENST00000531957 SEMA6DQ8NFY4 1073 aa4.2□□□□□ -1.74
ATM-217ENST00000531957 ZCRB1Q8TBF4 217 aaKnown RBP4.2□□□□□ -1.74
ATM-217ENST00000531957 ATG4AQ8WYN0 398 aa4.2□□□□□ -1.74
ATM-217ENST00000531957 HPS3Q969F9 1004 aa4.2□□□□□ -1.74
ATM-217ENST00000531957 FAM167AQ96KS9 214 aa4.2□□□□□ -1.74
ATM-217ENST00000531957 MAP3K14Q99558 947 aa4.2□□□□□ -1.74
ATM-217ENST00000531957 CGRRF1Q99675 332 aa4.2□□□□□ -1.74
ATM-217ENST00000531957 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.2□□□□□ -1.74
ATM-217ENST00000531957 hCG_1984214I3L0E3 225 aa4.19□□□□□ -1.74
ATM-217ENST00000531957 GRPP07492 148 aa4.19□□□□□ -1.74
ATM-217ENST00000531957 FAM163BP0C2L3 166 aa4.19□□□□□ -1.74
ATM-217ENST00000531957 ATXN1LP0C7T5 689 aaKnown RBP4.19□□□□□ -1.74
ATM-217ENST00000531957 ENGP17813 658 aa4.19□□□□□ -1.74
ATM-217ENST00000531957 MPGP29372 298 aa4.19□□□□□ -1.74
ATM-217ENST00000531957 CYP2C18P33260 490 aa4.19□□□□□ -1.74
ATM-217ENST00000531957 ALDH9A1P49189 494 aa4.19□□□□□ -1.74
ATM-217ENST00000531957 IQCB1Q15051 598 aa4.19□□□□□ -1.74
ATM-217ENST00000531957 EZH2Q15910 746 aaKnown RBP4.19□□□□□ -1.74
ATM-217ENST00000531957 IFIT1BQ5T764 474 aaKnown RBP4.19□□□□□ -1.74
ATM-217ENST00000531957 RGS7BPQ6MZT1 257 aaPredicted RBP4.19□□□□□ -1.74
ATM-217ENST00000531957 CEP85Q6P2H3 762 aa4.19□□□□□ -1.74
ATM-217ENST00000531957 NAPRTQ6XQN6 538 aa4.19□□□□□ -1.74
ATM-217ENST00000531957 ZNF66Q6ZN08 573 aa4.19□□□□□ -1.74
ATM-217ENST00000531957 REPS1Q96D71 796 aa4.19□□□□□ -1.74
ATM-217ENST00000531957 CDK5RAP3Q96JB5 506 aa4.19□□□□□ -1.74
ATM-217ENST00000531957 MACROD1Q9BQ69 325 aa4.19□□□□□ -1.74
ATM-217ENST00000531957 SH2D3AQ9BRG2 576 aa4.19□□□□□ -1.74
ATM-217ENST00000531957 KRTAP1-5Q9BYS1 174 aa4.19□□□□□ -1.74
ATM-217ENST00000531957 DLL3Q9NYJ7 618 aa4.19□□□□□ -1.74
ATM-217ENST00000531957 STXBP5LQ9Y2K9 1186 aa4.19□□□□□ -1.74
ATM-217ENST00000531957 MRPS17Q9Y2R5 130 aaKnown RBP4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms