RNA–Protein interactions for RNA: ENST00000531842.1

USF1-210, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-210ENST00000531842 TADA3O75528 432 aa9.72□□□□□ -0.85
USF1-210ENST00000531842 TOM1L1O75674 476 aa9.72□□□□□ -0.85
USF1-210ENST00000531842 F11P03951 625 aa9.72□□□□□ -0.85
USF1-210ENST00000531842 MAPTP10636 758 aaKnown RBP9.72□□□□□ -0.85
USF1-210ENST00000531842 HMGA1P17096 107 aaKnown RBP9.72□□□□□ -0.85
USF1-210ENST00000531842 NLRP12P59046 1061 aa9.72□□□□□ -0.85
USF1-210ENST00000531842 LILRA4P59901 499 aa9.72□□□□□ -0.85
USF1-210ENST00000531842 ELF2Q15723 593 aa9.72□□□□□ -0.85
USF1-210ENST00000531842 C2orf27AQ580R0 203 aa9.72□□□□□ -0.85
USF1-210ENST00000531842 TTC38Q5R3I4 469 aa9.72□□□□□ -0.85
USF1-210ENST00000531842 ANO7Q6IWH7 933 aa9.72□□□□□ -0.85
USF1-210ENST00000531842 C1orf228Q6PIY5 440 aa9.72□□□□□ -0.85
USF1-210ENST00000531842 TMEM161BQ8NDZ6 487 aa9.72□□□□□ -0.85
USF1-210ENST00000531842 PIGKQ92643 395 aa9.72□□□□□ -0.85
USF1-210ENST00000531842 P2RY13Q9BPV8 354 aa9.72□□□□□ -0.85
USF1-210ENST00000531842 PI4K2AQ9BTU6 479 aa9.72□□□□□ -0.85
USF1-210ENST00000531842 ZCWPW1Q9H0M4 648 aa9.72□□□□□ -0.85
USF1-210ENST00000531842 LINC00597Q9H2U6 94 aa9.72□□□□□ -0.85
USF1-210ENST00000531842 TMEM9BQ9NQ34 198 aa9.72□□□□□ -0.85
USF1-210ENST00000531842 TMEM74BQ9NUR3 256 aa9.72□□□□□ -0.85
USF1-210ENST00000531842 THG1LQ9NWX6 298 aaKnown RBP9.72□□□□□ -0.85
USF1-210ENST00000531842 OBP2AQ9NY56 170 aa9.72□□□□□ -0.85
USF1-210ENST00000531842 MAFFQ9ULX9 164 aa9.72□□□□□ -0.85
USF1-210ENST00000531842 FLNBO75369 2602 aaKnown RBP9.72□□□□□ -0.85
USF1-210ENST00000531842 HELZ2Q9BYK8 2649 aaKnown RBP9.72□□□□□ -0.85
USF1-210ENST00000531842 PLXND1Q9Y4D7 1925 aa9.72□□□□□ -0.85
USF1-210ENST00000531842 PCDH15Q96QU1 1955 aa9.72□□□□□ -0.85
USF1-210ENST00000531842 ACACAQ13085 2346 aa9.71□□□□□ -0.85
USF1-210ENST00000531842 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.71□□□□□ -0.86
USF1-210ENST00000531842 TULP1O00294 542 aaPredicted RBP9.71□□□□□ -0.86
USF1-210ENST00000531842 KHNYNO15037 678 aaKnown RBP9.71□□□□□ -0.86
USF1-210ENST00000531842 FAM189A1O60320 539 aa9.71□□□□□ -0.86
USF1-210ENST00000531842 AKAP3O75969 853 aa9.71□□□□□ -0.86
USF1-210ENST00000531842 APBB3O95704 486 aa9.71□□□□□ -0.86
USF1-210ENST00000531842 AVPR1AP37288 418 aa9.71□□□□□ -0.86
USF1-210ENST00000531842 PTGER3P43115 390 aa9.71□□□□□ -0.86
USF1-210ENST00000531842 TOB1P50616 345 aaPredicted RBP9.71□□□□□ -0.86
USF1-210ENST00000531842 PLCB2Q00722 1185 aa9.71□□□□□ -0.86
USF1-210ENST00000531842 MCL1Q07820 350 aa9.71□□□□□ -0.86
USF1-210ENST00000531842 BFSP1Q12934 665 aa9.71□□□□□ -0.86
USF1-210ENST00000531842 MYBPC2Q14324 1141 aa9.71□□□□□ -0.86
USF1-210ENST00000531842 TAF12Q16514 161 aa9.71□□□□□ -0.86
USF1-210ENST00000531842 DDR2Q16832 855 aa9.71□□□□□ -0.86
USF1-210ENST00000531842 DAB2IPQ5VWQ8 1189 aa9.71□□□□□ -0.86
USF1-210ENST00000531842 C9orf57Q5W0N0 161 aa9.71□□□□□ -0.86
USF1-210ENST00000531842 WSCD1Q658N2 575 aa9.71□□□□□ -0.86
USF1-210ENST00000531842 PMS2CLQ68D20 193 aa9.71□□□□□ -0.86
USF1-210ENST00000531842 ARMCX5Q6P1M9 558 aa9.71□□□□□ -0.86
USF1-210ENST00000531842 TMEM92Q6UXU6 159 aa9.71□□□□□ -0.86
USF1-210ENST00000531842 CYP2U1Q7Z449 544 aa9.71□□□□□ -0.86
USF1-210ENST00000531842 ITIH5Q86UX2 942 aa9.71□□□□□ -0.86
USF1-210ENST00000531842 TMEFF1Q8IYR6 380 aa9.71□□□□□ -0.86
USF1-210ENST00000531842 CHCHD4Q8N4Q1 142 aa9.71□□□□□ -0.86
USF1-210ENST00000531842 CAMKK1Q8N5S9 505 aa9.71□□□□□ -0.86
USF1-210ENST00000531842 MDGA1Q8NFP4 955 aa9.71□□□□□ -0.86
USF1-210ENST00000531842 LRRC15Q8TF66 581 aa9.71□□□□□ -0.86
USF1-210ENST00000531842 TRPC7Q9HCX4 862 aa9.71□□□□□ -0.86
USF1-210ENST00000531842 TDP1Q9NUW8 608 aa9.71□□□□□ -0.86
USF1-210ENST00000531842 MBD1Q9UIS9 605 aaPredicted RBP9.71□□□□□ -0.86
USF1-210ENST00000531842 TBX20Q9UMR3 447 aa9.71□□□□□ -0.86
USF1-210ENST00000531842 UBQLN1Q9UMX0 589 aaKnown RBP9.71□□□□□ -0.86
USF1-210ENST00000531842 ASB3Q9Y575 518 aa9.71□□□□□ -0.86
USF1-210ENST00000531842 PCDHB6Q9Y5E3 794 aa9.71□□□□□ -0.86
USF1-210ENST00000531842 ASXL3Q9C0F0 2248 aa9.7□□□□□ -0.86
USF1-210ENST00000531842 CLDN3O15551 220 aa9.7□□□□□ -0.86
USF1-210ENST00000531842 ATG13O75143 517 aa9.7□□□□□ -0.86
USF1-210ENST00000531842 RHOBTB1O94844 696 aa9.7□□□□□ -0.86
USF1-210ENST00000531842 CLTAP09496 248 aa9.7□□□□□ -0.86
USF1-210ENST00000531842 HAPLN1P10915 354 aaPredicted RBP9.7□□□□□ -0.86
USF1-210ENST00000531842 ODC1P11926 461 aa9.7□□□□□ -0.86
USF1-210ENST00000531842 TYMPP19971 482 aa9.7□□□□□ -0.86
USF1-210ENST00000531842 CDC25CP30307 473 aa9.7□□□□□ -0.86
USF1-210ENST00000531842 FXR2P51116 673 aaKnown RBP eCLIP9.7□□□□□ -0.86
USF1-210ENST00000531842 WNT7BP56706 349 aa9.7□□□□□ -0.86
USF1-210ENST00000531842 ANAPC15P60006 121 aa9.7□□□□□ -0.86
USF1-210ENST00000531842 SIM1P81133 766 aaPredicted RBP9.7□□□□□ -0.86
USF1-210ENST00000531842 PPP2R3AQ06190 1150 aa9.7□□□□□ -0.86
USF1-210ENST00000531842 STRN3Q13033 797 aa9.7□□□□□ -0.86
USF1-210ENST00000531842 SAFBQ15424 915 aaKnown RBP eCLIP9.7□□□□□ -0.86
USF1-210ENST00000531842 GAB4Q2WGN9 574 aa9.7□□□□□ -0.86
USF1-210ENST00000531842 EMC10Q5UCC4 262 aa9.7□□□□□ -0.86
USF1-210ENST00000531842 HAUS3Q68CZ6 603 aa9.7□□□□□ -0.86
USF1-210ENST00000531842 SLC39A4Q6P5W5 647 aa9.7□□□□□ -0.86
USF1-210ENST00000531842 SYT13Q7L8C5 426 aa9.7□□□□□ -0.86
USF1-210ENST00000531842 TSTD1Q8NFU3 115 aa9.7□□□□□ -0.86
USF1-210ENST00000531842 CD101Q93033 1021 aa9.7□□□□□ -0.86
USF1-210ENST00000531842 BICD1Q96G01 975 aa9.7□□□□□ -0.86
USF1-210ENST00000531842 DRC1Q96MC2 740 aa9.7□□□□□ -0.86
USF1-210ENST00000531842 CAMK1GQ96NX5 476 aa9.7□□□□□ -0.86
USF1-210ENST00000531842 PNMA5Q96PV4 448 aa9.7□□□□□ -0.86
USF1-210ENST00000531842 GCNAQ96QF7 691 aa9.7□□□□□ -0.86
USF1-210ENST00000531842 FNBP1Q96RU3 617 aa9.7□□□□□ -0.86
USF1-210ENST00000531842 PYM1Q9BRP8 204 aaKnown RBP9.7□□□□□ -0.86
USF1-210ENST00000531842 ECT2Q9H8V3 914 aa9.7□□□□□ -0.86
USF1-210ENST00000531842 DNM3Q9UQ16 869 aa9.7□□□□□ -0.86
USF1-210ENST00000531842 C2orf78A6NCI8 922 aa9.69□□□□□ -0.86
USF1-210ENST00000531842 ANKRD63C9JTQ0 380 aa9.69□□□□□ -0.86
USF1-210ENST00000531842 K7EQS6 105 aa9.69□□□□□ -0.86
USF1-210ENST00000531842 CYB561D2O14569 222 aa9.69□□□□□ -0.86
USF1-210ENST00000531842 CEACAM1P13688 526 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms