RNA–Protein interactions for RNA: ENST00000531741.1

VPS26B-206, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-206ENST00000531741 SPATA21Q7Z572 469 aa17.75■□□□□ 0.43
VPS26B-206ENST00000531741 TGS1Q96RS0 853 aaKnown RBP17.75■□□□□ 0.43
VPS26B-206ENST00000531741 FETUBQ9UGM5 382 aa17.75■□□□□ 0.43
VPS26B-206ENST00000531741 TBK1Q9UHD2 729 aa17.75■□□□□ 0.43
VPS26B-206ENST00000531741 SOCS7O14512 581 aa17.74■□□□□ 0.43
VPS26B-206ENST00000531741 ATP2C2O75185 946 aa17.74■□□□□ 0.43
VPS26B-206ENST00000531741 SLC25A27O95847 323 aa17.74■□□□□ 0.43
VPS26B-206ENST00000531741 GH1P01241 217 aa17.74■□□□□ 0.43
VPS26B-206ENST00000531741 ZSCAN5DPP0CG00 497 aa17.74■□□□□ 0.43
VPS26B-206ENST00000531741 LACTBP83111 547 aaPredicted RBP17.74■□□□□ 0.43
VPS26B-206ENST00000531741 SNCBQ16143 134 aa17.74■□□□□ 0.43
VPS26B-206ENST00000531741 CENPUQ71F23 418 aa17.74■□□□□ 0.43
VPS26B-206ENST00000531741 PRCCQ92733 491 aaPredicted RBP17.74■□□□□ 0.43
VPS26B-206ENST00000531741 NFKBIZQ9BYH8 718 aa17.74■□□□□ 0.43
VPS26B-206ENST00000531741 ABCF3Q9NUQ8 709 aa17.74■□□□□ 0.43
VPS26B-206ENST00000531741 SLC24A2Q9UI40 661 aa17.74■□□□□ 0.43
VPS26B-206ENST00000531741 VGLL3A8MV65 326 aa17.73■□□□□ 0.43
VPS26B-206ENST00000531741 MAGEB2O15479 319 aa17.73■□□□□ 0.43
VPS26B-206ENST00000531741 ARIH2O95376 493 aa17.73■□□□□ 0.43
VPS26B-206ENST00000531741 KRT3P12035 628 aa17.73■□□□□ 0.43
VPS26B-206ENST00000531741 PSMA2P25787 234 aa17.73■□□□□ 0.43
VPS26B-206ENST00000531741 RFC1P35251 1148 aaPredicted RBP17.73■□□□□ 0.43
VPS26B-206ENST00000531741 IL9RQ01113 521 aa17.73■□□□□ 0.43
VPS26B-206ENST00000531741 ACVR2BQ13705 512 aa17.73■□□□□ 0.43
VPS26B-206ENST00000531741 HADHQ16836 314 aaKnown RBP17.73■□□□□ 0.43
VPS26B-206ENST00000531741 CYP4A22Q5TCH4 519 aa17.73■□□□□ 0.43
VPS26B-206ENST00000531741 DENND1BQ6P3S1 775 aa17.73■□□□□ 0.43
VPS26B-206ENST00000531741 BBS12Q6ZW61 710 aa17.73■□□□□ 0.43
VPS26B-206ENST00000531741 THNSL1Q8IYQ7 743 aa17.73■□□□□ 0.43
VPS26B-206ENST00000531741 GPC2Q8N158 579 aa17.73■□□□□ 0.43
VPS26B-206ENST00000531741 TNFSF13BQ9Y275 285 aa17.73■□□□□ 0.43
VPS26B-206ENST00000531741 FARP1Q9Y4F1 1045 aaPredicted RBP17.73■□□□□ 0.43
VPS26B-206ENST00000531741 FOXO6A8MYZ6 492 aa17.73■□□□□ 0.43
VPS26B-206ENST00000531741 SMAPO00193 183 aa17.73■□□□□ 0.43
VPS26B-206ENST00000531741 PEX10O60683 326 aa17.73■□□□□ 0.43
VPS26B-206ENST00000531741 LRCH4O75427 683 aa17.73■□□□□ 0.43
VPS26B-206ENST00000531741 ETS1P14921 441 aa17.73■□□□□ 0.43
VPS26B-206ENST00000531741 ACAP1Q15027 740 aa17.73■□□□□ 0.43
VPS26B-206ENST00000531741 TMED2Q15363 201 aa17.73■□□□□ 0.43
VPS26B-206ENST00000531741 MTFR1Q15390 333 aa17.73■□□□□ 0.43
VPS26B-206ENST00000531741 HSDL1Q3SXM5 330 aa17.73■□□□□ 0.43
VPS26B-206ENST00000531741 RGS9BPQ6ZS82 235 aa17.73■□□□□ 0.43
VPS26B-206ENST00000531741 LRRC71Q8N4P6 559 aa17.73■□□□□ 0.43
VPS26B-206ENST00000531741 GDAP1Q8TB36 358 aa17.73■□□□□ 0.43
VPS26B-206ENST00000531741 DENND1AQ8TEH3 1009 aa17.73■□□□□ 0.43
VPS26B-206ENST00000531741 SMG5Q9UPR3 1016 aaKnown RBP17.73■□□□□ 0.43
VPS26B-206ENST00000531741 OTOFQ9HC10 1997 aa17.72■□□□□ 0.43
VPS26B-206ENST00000531741 SGK1O00141 431 aa17.72■□□□□ 0.43
VPS26B-206ENST00000531741 NOP56O00567 594 aaKnown RBP17.72■□□□□ 0.43
VPS26B-206ENST00000531741 TAC1P20366 129 aa17.72■□□□□ 0.43
VPS26B-206ENST00000531741 MARK3P27448 753 aa17.72■□□□□ 0.43
VPS26B-206ENST00000531741 ELF3P78545 371 aaPredicted RBP17.72■□□□□ 0.43
VPS26B-206ENST00000531741 ZNF268Q14587 947 aaPredicted RBP17.72■□□□□ 0.43
VPS26B-206ENST00000531741 RNF43Q68DV7 783 aa17.72■□□□□ 0.43
VPS26B-206ENST00000531741 SCARA5Q6ZMJ2 495 aa17.72■□□□□ 0.43
VPS26B-206ENST00000531741 RHPN2Q8IUC4 686 aa17.72■□□□□ 0.43
VPS26B-206ENST00000531741 ARFGAP1Q8N6T3 406 aa17.72■□□□□ 0.43
VPS26B-206ENST00000531741 CCDC63Q8NA47 563 aa17.72■□□□□ 0.43
VPS26B-206ENST00000531741 FGD4Q96M96 766 aa17.72■□□□□ 0.43
VPS26B-206ENST00000531741 TMEM121Q9BTD3 319 aa17.72■□□□□ 0.43
VPS26B-206ENST00000531741 A0A0G2JLL6 359 aaPredicted RBP17.71■□□□□ 0.43
VPS26B-206ENST00000531741 CNMDO75829 334 aa17.71■□□□□ 0.43
VPS26B-206ENST00000531741 ASMTLO95671 621 aa17.71■□□□□ 0.43
VPS26B-206ENST00000531741 RDXP35241 583 aaKnown RBP17.71■□□□□ 0.43
VPS26B-206ENST00000531741 RAD23BP54727 409 aa17.71■□□□□ 0.43
VPS26B-206ENST00000531741 MBTD1Q05BQ5 628 aa17.71■□□□□ 0.43
VPS26B-206ENST00000531741 POU5F1BQ06416 359 aa17.71■□□□□ 0.43
VPS26B-206ENST00000531741 BNIP1Q12981 228 aa17.71■□□□□ 0.43
VPS26B-206ENST00000531741 ZNF667Q5HYK9 610 aa17.71■□□□□ 0.43
VPS26B-206ENST00000531741 PRRT2Q7Z6L0 340 aaPredicted RBP17.71■□□□□ 0.43
VPS26B-206ENST00000531741 TRIM50Q86XT4 487 aa17.71■□□□□ 0.43
VPS26B-206ENST00000531741 VRTNQ9H8Y1 702 aa17.71■□□□□ 0.43
VPS26B-206ENST00000531741 RPF1Q9H9Y2 349 aaKnown RBP17.71■□□□□ 0.43
VPS26B-206ENST00000531741 RXFP1Q9HBX9 757 aa17.71■□□□□ 0.43
VPS26B-206ENST00000531741 MLXIPLQ9NP71 852 aa17.71■□□□□ 0.43
VPS26B-206ENST00000531741 SSU72Q9NP77 194 aaKnown RBP17.71■□□□□ 0.43
VPS26B-206ENST00000531741 CYTH4Q9UIA0 394 aa17.71■□□□□ 0.43
VPS26B-206ENST00000531741 SIX4Q9UIU6 781 aa17.71■□□□□ 0.43
VPS26B-206ENST00000531741 AGTPBP1Q9UPW5 1226 aa17.71■□□□□ 0.43
VPS26B-206ENST00000531741 CSADQ9Y600 493 aa17.71■□□□□ 0.43
VPS26B-206ENST00000531741 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.71■□□□□ 0.43
VPS26B-206ENST00000531741 MGAMO43451 1857 aa17.71■□□□□ 0.43
VPS26B-206ENST00000531741 POLR2AP24928 1970 aaKnown RBP17.71■□□□□ 0.43
VPS26B-206ENST00000531741 HBP1O60381 514 aa17.71■□□□□ 0.43
VPS26B-206ENST00000531741 UBOX5O94941 541 aa17.71■□□□□ 0.43
VPS26B-206ENST00000531741 KDELR1P24390 212 aa17.71■□□□□ 0.43
VPS26B-206ENST00000531741 GABRB2P47870 512 aa17.71■□□□□ 0.43
VPS26B-206ENST00000531741 WDR4P57081 412 aaKnown RBP17.71■□□□□ 0.43
VPS26B-206ENST00000531741 PSMC1P62191 440 aaKnown RBP17.71■□□□□ 0.43
VPS26B-206ENST00000531741 IRX3P78415 501 aaPredicted RBP17.71■□□□□ 0.43
VPS26B-206ENST00000531741 CCDC15Q0P6D6 951 aa17.71■□□□□ 0.43
VPS26B-206ENST00000531741 RIPK1Q13546 671 aa17.71■□□□□ 0.43
VPS26B-206ENST00000531741 PRKG1Q13976 671 aa17.71■□□□□ 0.43
VPS26B-206ENST00000531741 FASTKD3Q14CZ7 662 aaKnown RBP17.71■□□□□ 0.43
VPS26B-206ENST00000531741 FAM187BQ17R55 369 aa17.71■□□□□ 0.43
VPS26B-206ENST00000531741 ZC3H12AQ5D1E8 599 aaKnown RBP17.71■□□□□ 0.43
VPS26B-206ENST00000531741 EEPD1Q7L9B9 569 aa17.71■□□□□ 0.43
VPS26B-206ENST00000531741 XYLT1Q86Y38 959 aa17.71■□□□□ 0.43
VPS26B-206ENST00000531741 PPIL6Q8IXY8 311 aa17.71■□□□□ 0.43
VPS26B-206ENST00000531741 ACTL9Q8TC94 416 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms