RNA–Protein interactions for RNA: ENST00000531733.1

FDFT1-220, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 2

Gene FDFT1, Length 712 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-220ENST00000531733 C2orf15Q8WU43 125 aaKnown RBP22.65■■□□□ 1.22
FDFT1-220ENST00000531733 POMGNT1Q8WZA1 660 aa22.65■■□□□ 1.22
FDFT1-220ENST00000531733 SMC3Q9UQE7 1217 aa22.65■■□□□ 1.22
FDFT1-220ENST00000531733 ZNF638Q14966 1978 aaKnown RBP22.64■■□□□ 1.21
FDFT1-220ENST00000531733 HCRTO43612 131 aa22.64■■□□□ 1.21
FDFT1-220ENST00000531733 TADA3O75528 432 aa22.64■■□□□ 1.21
FDFT1-220ENST00000531733 RUNX3Q13761 415 aa22.64■■□□□ 1.21
FDFT1-220ENST00000531733 TAF12Q16514 161 aa22.64■■□□□ 1.21
FDFT1-220ENST00000531733 TMEM196Q5HYL7 178 aa22.64■■□□□ 1.21
FDFT1-220ENST00000531733 PDCL2Q8N4E4 241 aa22.64■■□□□ 1.21
FDFT1-220ENST00000531733 SAAL1Q96ER3 474 aa22.64■■□□□ 1.21
FDFT1-220ENST00000531733 RXFP3Q9NSD7 469 aa22.64■■□□□ 1.21
FDFT1-220ENST00000531733 THG1LQ9NWX6 298 aaKnown RBP22.64■■□□□ 1.21
FDFT1-220ENST00000531733 TBC1D7Q9P0N9 293 aa22.64■■□□□ 1.21
FDFT1-220ENST00000531733 L1RE1Q9UN81 338 aa22.64■■□□□ 1.21
FDFT1-220ENST00000531733 MAGED2Q9UNF1 606 aaPredicted RBP22.64■■□□□ 1.21
FDFT1-220ENST00000531733 PCDHB5Q9Y5E4 795 aa22.64■■□□□ 1.21
FDFT1-220ENST00000531733 EML5Q05BV3 1969 aa22.63■■□□□ 1.21
FDFT1-220ENST00000531733 CHD8Q9HCK8 2581 aa22.63■■□□□ 1.21
FDFT1-220ENST00000531733 TULP1O00294 542 aaPredicted RBP22.63■■□□□ 1.21
FDFT1-220ENST00000531733 AXIN1O15169 862 aa22.63■■□□□ 1.21
FDFT1-220ENST00000531733 EGFP01133 1207 aa22.63■■□□□ 1.21
FDFT1-220ENST00000531733 ACAT1P24752 427 aaKnown RBP22.63■■□□□ 1.21
FDFT1-220ENST00000531733 SF3A2Q15428 464 aaKnown RBP22.63■■□□□ 1.21
FDFT1-220ENST00000531733 DDR2Q16832 855 aa22.63■■□□□ 1.21
FDFT1-220ENST00000531733 SV2CQ496J9 727 aa22.63■■□□□ 1.21
FDFT1-220ENST00000531733 DCP1BQ8IZD4 617 aaKnown RBP22.63■■□□□ 1.21
FDFT1-220ENST00000531733 C1orf127Q8N9H9 656 aa22.63■■□□□ 1.21
FDFT1-220ENST00000531733 CXorf38Q8TB03 319 aa22.63■■□□□ 1.21
FDFT1-220ENST00000531733 FAM213AQ9BRX8 229 aa22.63■■□□□ 1.21
FDFT1-220ENST00000531733 FGFBP2Q9BYJ0 223 aa22.63■■□□□ 1.21
FDFT1-220ENST00000531733 CLIC4Q9Y696 253 aa22.63■■□□□ 1.21
FDFT1-220ENST00000531733 MYMKA6NI61 221 aa22.62■■□□□ 1.21
FDFT1-220ENST00000531733 TRDMT1O14717 391 aaKnown RBP22.62■■□□□ 1.21
FDFT1-220ENST00000531733 PRPF40AO75400 957 aaKnown RBP22.62■■□□□ 1.21
FDFT1-220ENST00000531733 CYP2F1P24903 491 aa22.62■■□□□ 1.21
FDFT1-220ENST00000531733 POLR2BP30876 1174 aaKnown RBP22.62■■□□□ 1.21
FDFT1-220ENST00000531733 AVPR1AP37288 418 aa22.62■■□□□ 1.21
FDFT1-220ENST00000531733 CASP5P51878 434 aa22.62■■□□□ 1.21
FDFT1-220ENST00000531733 SMARCB1Q12824 385 aa22.62■■□□□ 1.21
FDFT1-220ENST00000531733 PTPAQ15257 358 aa22.62■■□□□ 1.21
FDFT1-220ENST00000531733 KBTBD6Q86V97 674 aa22.62■■□□□ 1.21
FDFT1-220ENST00000531733 OSTM1Q86WC4 334 aa22.62■■□□□ 1.21
FDFT1-220ENST00000531733 KRI1Q8N9T8 703 aaKnown RBP22.62■■□□□ 1.21
FDFT1-220ENST00000531733 DNAJC19Q96DA6 116 aa22.62■■□□□ 1.21
FDFT1-220ENST00000531733 SLC22A12Q96S37 553 aa22.62■■□□□ 1.21
FDFT1-220ENST00000531733 PKMYT1Q99640 499 aa22.62■■□□□ 1.21
FDFT1-220ENST00000531733 ARRDC1-AS1Q9H2J1 176 aa22.62■■□□□ 1.21
FDFT1-220ENST00000531733 TDP1Q9NUW8 608 aa22.62■■□□□ 1.21
FDFT1-220ENST00000531733 AGAP1Q9UPQ3 857 aa22.62■■□□□ 1.21
FDFT1-220ENST00000531733 GREB1Q4ZG55 1949 aa22.62■■□□□ 1.21
FDFT1-220ENST00000531733 ZFHX4Q86UP3 3567 aa22.62■■□□□ 1.21
FDFT1-220ENST00000531733 IL18RAPO95256 599 aa22.61■■□□□ 1.21
FDFT1-220ENST00000531733 ITGB3P05106 788 aa22.61■■□□□ 1.21
FDFT1-220ENST00000531733 ABCD1P33897 745 aa22.61■■□□□ 1.21
FDFT1-220ENST00000531733 MAP1BP46821 2468 aaKnown RBP22.61■■□□□ 1.21
FDFT1-220ENST00000531733 TFAMQ00059 246 aaKnown RBP22.61■■□□□ 1.21
FDFT1-220ENST00000531733 POU5F1Q01860 360 aaKnown RBP22.61■■□□□ 1.21
FDFT1-220ENST00000531733 BRAPQ7Z569 592 aa22.61■■□□□ 1.21
FDFT1-220ENST00000531733 GAB3Q8WWW8 586 aa22.61■■□□□ 1.21
FDFT1-220ENST00000531733 EZH1Q92800 747 aaPredicted RBP22.61■■□□□ 1.21
FDFT1-220ENST00000531733 ZNF560Q96MR9 790 aa22.61■■□□□ 1.21
FDFT1-220ENST00000531733 CLIC6Q96NY7 704 aa22.61■■□□□ 1.21
FDFT1-220ENST00000531733 SMOC1Q9H4F8 434 aa22.61■■□□□ 1.21
FDFT1-220ENST00000531733 SPAG17Q6Q759 2223 aa22.6■■□□□ 1.21
FDFT1-220ENST00000531733 GOLGA8IPA6NC78 632 aa22.6■■□□□ 1.21
FDFT1-220ENST00000531733 GOLGA8JA6NMD2 632 aa22.6■■□□□ 1.21
FDFT1-220ENST00000531733 RNF40O75150 1001 aa22.6■■□□□ 1.21
FDFT1-220ENST00000531733 BMP15O95972 392 aa22.6■■□□□ 1.21
FDFT1-220ENST00000531733 GALK1P51570 392 aa22.6■■□□□ 1.21
FDFT1-220ENST00000531733 BFSP1Q12934 665 aa22.6■■□□□ 1.21
FDFT1-220ENST00000531733 MON1AQ86VX9 555 aa22.6■■□□□ 1.21
FDFT1-220ENST00000531733 BRSK2Q8IWQ3 736 aa22.6■■□□□ 1.21
FDFT1-220ENST00000531733 HVCN1Q96D96 273 aa22.6■■□□□ 1.21
FDFT1-220ENST00000531733 CYP2S1Q96SQ9 504 aa22.6■■□□□ 1.21
FDFT1-220ENST00000531733 MRPL44Q9H9J2 332 aaKnown RBP22.6■■□□□ 1.21
FDFT1-220ENST00000531733 DDX43Q9NXZ2 648 aaKnown RBP22.6■■□□□ 1.21
FDFT1-220ENST00000531733 FBXO2Q9UK22 296 aaPredicted RBP22.6■■□□□ 1.21
FDFT1-220ENST00000531733 RPP40O75818 363 aaKnown RBP22.59■■□□□ 1.21
FDFT1-220ENST00000531733 RAP1GAPP47736 663 aa22.59■■□□□ 1.21
FDFT1-220ENST00000531733 TSPY1Q01534 308 aa22.59■■□□□ 1.21
FDFT1-220ENST00000531733 GRSF1Q12849 480 aaKnown RBP eCLIP22.59■■□□□ 1.21
FDFT1-220ENST00000531733 INTS6LQ5JSJ4 861 aaKnown RBP22.59■■□□□ 1.21
FDFT1-220ENST00000531733 L1TD1Q5T7N2 865 aaKnown RBP22.59■■□□□ 1.21
FDFT1-220ENST00000531733 CBWD1Q9BRT8 395 aa22.59■■□□□ 1.21
FDFT1-220ENST00000531733 SIX4Q9UIU6 781 aa22.59■■□□□ 1.21
FDFT1-220ENST00000531733 GTF3C4Q9UKN8 822 aa22.59■■□□□ 1.21
FDFT1-220ENST00000531733 NOL4O94818 638 aa22.58■■□□□ 1.21
FDFT1-220ENST00000531733 CSH1P0DML2 217 aa22.58■■□□□ 1.21
FDFT1-220ENST00000531733 CSH2P0DML3 217 aa22.58■■□□□ 1.21
FDFT1-220ENST00000531733 KCNA4P22459 653 aa22.58■■□□□ 1.21
FDFT1-220ENST00000531733 DDX6P26196 483 aaKnown RBP eCLIP22.58■■□□□ 1.21
FDFT1-220ENST00000531733 GJA4P35212 333 aa22.58■■□□□ 1.21
FDFT1-220ENST00000531733 POSTNQ15063 836 aa22.58■■□□□ 1.21
FDFT1-220ENST00000531733 FAM173BQ6P4H8 233 aa22.58■■□□□ 1.21
FDFT1-220ENST00000531733 NT5DC4Q86YG4 428 aa22.58■■□□□ 1.21
FDFT1-220ENST00000531733 TTC16Q8NEE8 873 aa22.58■■□□□ 1.21
FDFT1-220ENST00000531733 LEO1Q8WVC0 666 aaPredicted RBP22.58■■□□□ 1.21
FDFT1-220ENST00000531733 MRPS31Q92665 395 aaKnown RBP22.58■■□□□ 1.21
FDFT1-220ENST00000531733 ACCSQ96QU6 501 aa22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms