RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 CDC42EP1Q00587 391 aa5.28□□□□□ -1.56
USP47-211ENST00000531513 FMO1Q01740 532 aa5.28□□□□□ -1.56
USP47-211ENST00000531513 PLS1Q14651 629 aa5.28□□□□□ -1.56
USP47-211ENST00000531513 CNGA2Q16280 664 aa5.28□□□□□ -1.56
USP47-211ENST00000531513 KHDC1Q4VXA5 237 aaKnown RBP5.28□□□□□ -1.56
USP47-211ENST00000531513 FAM47AQ5JRC9 791 aa5.28□□□□□ -1.56
USP47-211ENST00000531513 ATXN7L2Q5T6C5 722 aaPredicted RBP5.28□□□□□ -1.56
USP47-211ENST00000531513 TLDC1Q6P9B6 456 aa5.28□□□□□ -1.56
USP47-211ENST00000531513 GPR149Q86SP6 731 aa5.28□□□□□ -1.56
USP47-211ENST00000531513 MAPKAPK5Q8IW41 473 aa5.28□□□□□ -1.56
USP47-211ENST00000531513 RHOT2Q8IXI1 618 aa5.28□□□□□ -1.56
USP47-211ENST00000531513 TRMT2AQ8IZ69 625 aaKnown RBP5.28□□□□□ -1.56
USP47-211ENST00000531513 HOXB13Q92826 284 aaPredicted RBP5.28□□□□□ -1.56
USP47-211ENST00000531513 SLC35A4Q96G79 324 aa5.28□□□□□ -1.56
USP47-211ENST00000531513 Q96MF0 132 aa5.28□□□□□ -1.56
USP47-211ENST00000531513 ISCA1Q9BUE6 129 aa5.28□□□□□ -1.56
USP47-211ENST00000531513 AGO4Q9HCK5 861 aaKnown RBP5.28□□□□□ -1.56
USP47-211ENST00000531513 TDP1Q9NUW8 608 aa5.28□□□□□ -1.56
USP47-211ENST00000531513 CALCOCO1Q9P1Z2 691 aa5.28□□□□□ -1.56
USP47-211ENST00000531513 PGAP2Q9UHJ9 254 aa5.28□□□□□ -1.56
USP47-211ENST00000531513 OGDHLQ9ULD0 1010 aa5.28□□□□□ -1.56
USP47-211ENST00000531513 ATP11BQ9Y2G3 1177 aa5.28□□□□□ -1.56
USP47-211ENST00000531513 CXorf49A8MYA2 514 aaPredicted RBP5.27□□□□□ -1.57
USP47-211ENST00000531513 MYO1FO00160 1098 aa5.27□□□□□ -1.57
USP47-211ENST00000531513 ADAMTS3O15072 1205 aa5.27□□□□□ -1.57
USP47-211ENST00000531513 PJA2O43164 708 aa5.27□□□□□ -1.57
USP47-211ENST00000531513 ENDOD1O94919 500 aa5.27□□□□□ -1.57
USP47-211ENST00000531513 MATN4O95460 622 aa5.27□□□□□ -1.57
USP47-211ENST00000531513 IGLV2-14P01704 120 aa5.27□□□□□ -1.57
USP47-211ENST00000531513 COL11A2P13942 1736 aaPredicted RBP5.27□□□□□ -1.57
USP47-211ENST00000531513 HSD3B1P14060 373 aa5.27□□□□□ -1.57
USP47-211ENST00000531513 TSHRP16473 764 aa5.27□□□□□ -1.57
USP47-211ENST00000531513 SLC6A9P48067 706 aa5.27□□□□□ -1.57
USP47-211ENST00000531513 SIM1P81133 766 aaPredicted RBP5.27□□□□□ -1.57
USP47-211ENST00000531513 LMOD3Q0VAK6 560 aa5.27□□□□□ -1.57
USP47-211ENST00000531513 TARDBPQ13148 414 aaKnown RBP eCLIP5.27□□□□□ -1.57
USP47-211ENST00000531513 RAB39AQ14964 217 aa5.27□□□□□ -1.57
USP47-211ENST00000531513 B3GNTL1Q67FW5 361 aaPredicted RBP5.27□□□□□ -1.57
USP47-211ENST00000531513 HIBCHQ6NVY1 386 aaPredicted RBP5.27□□□□□ -1.57
USP47-211ENST00000531513 MMS22LQ6ZRQ5 1243 aa5.27□□□□□ -1.57
USP47-211ENST00000531513 ZNF572Q7Z3I7 529 aaPredicted RBP5.27□□□□□ -1.57
USP47-211ENST00000531513 MYCT1Q8N699 235 aa5.27□□□□□ -1.57
USP47-211ENST00000531513 REPS2Q8NFH8 660 aa5.27□□□□□ -1.57
USP47-211ENST00000531513 OR7D4Q8NG98 312 aa5.27□□□□□ -1.57
USP47-211ENST00000531513 TMEM41AQ96HV5 264 aa5.27□□□□□ -1.57
USP47-211ENST00000531513 MRGPRX4Q96LA9 322 aa5.27□□□□□ -1.57
USP47-211ENST00000531513 COLEC11Q9BWP8 271 aa5.27□□□□□ -1.57
USP47-211ENST00000531513 ALOXE3Q9BYJ1 711 aa5.27□□□□□ -1.57
USP47-211ENST00000531513 MANSC1Q9H8J5 431 aa5.27□□□□□ -1.57
USP47-211ENST00000531513 BCO1Q9HAY6 547 aa5.27□□□□□ -1.57
USP47-211ENST00000531513 MYADML2A6NDP7 307 aa5.26□□□□□ -1.57
USP47-211ENST00000531513 KRTAP29-1A8MX34 341 aaPredicted RBP5.26□□□□□ -1.57
USP47-211ENST00000531513 IL18RAPO95256 599 aa5.26□□□□□ -1.57
USP47-211ENST00000531513 KITP10721 976 aa5.26□□□□□ -1.57
USP47-211ENST00000531513 ALOX15P16050 662 aaPredicted RBP5.26□□□□□ -1.57
USP47-211ENST00000531513 ADSLP30566 484 aaPredicted RBP5.26□□□□□ -1.57
USP47-211ENST00000531513 SLC7A1P30825 629 aa5.26□□□□□ -1.57
USP47-211ENST00000531513 MAPK10P53779 464 aa5.26□□□□□ -1.57
USP47-211ENST00000531513 CLRN1P58418 232 aa5.26□□□□□ -1.57
USP47-211ENST00000531513 ICA1Q05084 483 aa5.26□□□□□ -1.57
USP47-211ENST00000531513 SNAPC2Q13487 334 aa5.26□□□□□ -1.57
USP47-211ENST00000531513 DAG1Q14118 895 aa5.26□□□□□ -1.57
USP47-211ENST00000531513 ZNF169Q14929 603 aaPredicted RBP5.26□□□□□ -1.57
USP47-211ENST00000531513 CCDC38Q502W7 563 aa5.26□□□□□ -1.57
USP47-211ENST00000531513 EPHA10Q5JZY3 1008 aa5.26□□□□□ -1.57
USP47-211ENST00000531513 WDR78Q5VTH9 848 aa5.26□□□□□ -1.57
USP47-211ENST00000531513 PGBD2Q6P3X8 592 aa5.26□□□□□ -1.57
USP47-211ENST00000531513 LVRNQ6Q4G3 990 aa5.26□□□□□ -1.57
USP47-211ENST00000531513 Q6ZNX1 250 aa5.26□□□□□ -1.57
USP47-211ENST00000531513 RSPH3Q86UC2 560 aa5.26□□□□□ -1.57
USP47-211ENST00000531513 SYTL1Q8IYJ3 562 aa5.26□□□□□ -1.57
USP47-211ENST00000531513 TMEM132CQ8N3T6 1108 aa5.26□□□□□ -1.57
USP47-211ENST00000531513 NME8Q8N427 588 aa5.26□□□□□ -1.57
USP47-211ENST00000531513 SH2D3CQ8N5H7 860 aa5.26□□□□□ -1.57
USP47-211ENST00000531513 RNF152Q8N8N0 203 aa5.26□□□□□ -1.57
USP47-211ENST00000531513 TRIM63Q969Q1 353 aa5.26□□□□□ -1.57
USP47-211ENST00000531513 CYFIP2Q96F07 1278 aa5.26□□□□□ -1.57
USP47-211ENST00000531513 VRK1Q99986 396 aaPredicted RBP5.26□□□□□ -1.57
USP47-211ENST00000531513 ZSWIM1Q9BR11 485 aa5.26□□□□□ -1.57
USP47-211ENST00000531513 MYLK2Q9H1R3 596 aa5.26□□□□□ -1.57
USP47-211ENST00000531513 PNPLA8Q9NP80 782 aa5.26□□□□□ -1.57
USP47-211ENST00000531513 SAGE1Q9NXZ1 904 aa5.26□□□□□ -1.57
USP47-211ENST00000531513 ABCF2Q9UG63 623 aa5.26□□□□□ -1.57
USP47-211ENST00000531513 CPA4Q9UI42 421 aa5.26□□□□□ -1.57
USP47-211ENST00000531513 SIK3Q9Y2K2 1263 aa5.26□□□□□ -1.57
USP47-211ENST00000531513 PCDHGB2Q9Y5G2 931 aa5.26□□□□□ -1.57
USP47-211ENST00000531513 PNPLA7Q6ZV29 1317 aa5.25□□□□□ -1.57
USP47-211ENST00000531513 RBMXL2O75526 392 aaKnown RBP5.25□□□□□ -1.57
USP47-211ENST00000531513 C1QL1O75973 258 aa5.25□□□□□ -1.57
USP47-211ENST00000531513 THP07101 528 aa5.25□□□□□ -1.57
USP47-211ENST00000531513 MALP21145 153 aa5.25□□□□□ -1.57
USP47-211ENST00000531513 SMARCA1P28370 1054 aa5.25□□□□□ -1.57
USP47-211ENST00000531513 ECHS1P30084 290 aa5.25□□□□□ -1.57
USP47-211ENST00000531513 SREBF1P36956 1147 aa5.25□□□□□ -1.57
USP47-211ENST00000531513 SUMO3P55854 103 aaPredicted RBP5.25□□□□□ -1.57
USP47-211ENST00000531513 RAP2BP61225 183 aa5.25□□□□□ -1.57
USP47-211ENST00000531513 NHLH1Q02575 133 aa5.25□□□□□ -1.57
USP47-211ENST00000531513 OCA2Q04671 838 aa5.25□□□□□ -1.57
USP47-211ENST00000531513 FOXF2Q12947 444 aa5.25□□□□□ -1.57
USP47-211ENST00000531513 BLMHQ13867 455 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms