RNA–Protein interactions for RNA: ENST00000530640.6

CTSB-219, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTSB, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-219ENST00000530640 XYLT2Q9H1B5 865 aa16.7■□□□□ 0.26
CTSB-219ENST00000530640 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.7■□□□□ 0.269e-19■□□□□ 11
CTSB-219ENST00000530640 EPS15L1Q9UBC2 864 aa16.7■□□□□ 0.26
CTSB-219ENST00000530640 APEX2Q9UBZ4 518 aa16.7■□□□□ 0.26
CTSB-219ENST00000530640 FBXL21Q9UKT6 434 aa16.7■□□□□ 0.26
CTSB-219ENST00000530640 DAAM1Q9Y4D1 1078 aa16.7■□□□□ 0.26
CTSB-219ENST00000530640 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.7■□□□□ 0.26
CTSB-219ENST00000530640 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.7■□□□□ 0.26
CTSB-219ENST00000530640 C2orf16Q68DN1 1984 aa16.7■□□□□ 0.26
CTSB-219ENST00000530640 VWA8A3KMH1 1905 aa16.69■□□□□ 0.26
CTSB-219ENST00000530640 A0A1W2PQJ5 194 aa16.69■□□□□ 0.26
CTSB-219ENST00000530640 ASS1P00966 412 aaKnown RBP16.69■□□□□ 0.26
CTSB-219ENST00000530640 ITGB3P05106 788 aa16.69■□□□□ 0.26
CTSB-219ENST00000530640 TRIM21P19474 475 aaKnown RBP16.69■□□□□ 0.26
CTSB-219ENST00000530640 RFX1P22670 979 aa16.69■□□□□ 0.26
CTSB-219ENST00000530640 SOX4Q06945 474 aaPredicted RBP16.69■□□□□ 0.26
CTSB-219ENST00000530640 UPP1Q16831 310 aa16.69■□□□□ 0.26
CTSB-219ENST00000530640 KLHDC7AQ5VTJ3 777 aa16.69■□□□□ 0.26
CTSB-219ENST00000530640 PDXDC1Q6P996 788 aa16.69■□□□□ 0.26
CTSB-219ENST00000530640 DCLRE1AQ6PJP8 1040 aa16.69■□□□□ 0.26
CTSB-219ENST00000530640 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.69■□□□□ 0.26
CTSB-219ENST00000530640 TMEM130Q8N3G9 435 aa16.69■□□□□ 0.26
CTSB-219ENST00000530640 SPC24Q8NBT2 197 aa16.69■□□□□ 0.26
CTSB-219ENST00000530640 BEST2Q8NFU1 509 aa16.69■□□□□ 0.26
CTSB-219ENST00000530640 NEK11Q8NG66 645 aa16.69■□□□□ 0.26
CTSB-219ENST00000530640 FEZF2Q8TBJ5 459 aa16.69■□□□□ 0.26
CTSB-219ENST00000530640 NUP58Q9BVL2 599 aa16.69■□□□□ 0.26
CTSB-219ENST00000530640 VRTNQ9H8Y1 702 aa16.69■□□□□ 0.26
CTSB-219ENST00000530640 ZDHHC7Q9NXF8 308 aa16.69■□□□□ 0.26
CTSB-219ENST00000530640 DPP3Q9NY33 737 aa16.69■□□□□ 0.26
CTSB-219ENST00000530640 ZFP37Q9Y6Q3 630 aaPredicted RBP16.69■□□□□ 0.26
CTSB-219ENST00000530640 RIF1Q5UIP0 2472 aaKnown RBP16.69■□□□□ 0.26
CTSB-219ENST00000530640 ZFHX2Q9C0A1 2572 aaPredicted RBP16.69■□□□□ 0.26
CTSB-219ENST00000530640 CCDC195A0A1B0GUA6 201 aa16.68■□□□□ 0.26
CTSB-219ENST00000530640 ANO9A1A5B4 782 aa16.68■□□□□ 0.26
CTSB-219ENST00000530640 PRR23AA6NEV1 266 aa16.68■□□□□ 0.26
CTSB-219ENST00000530640 TULP1O00294 542 aaPredicted RBP16.68■□□□□ 0.26
CTSB-219ENST00000530640 TGM5O43548 720 aa16.68■□□□□ 0.26
CTSB-219ENST00000530640 XPOTO43592 962 aaKnown RBP16.68■□□□□ 0.26
CTSB-219ENST00000530640 STAU1O95793 577 aaKnown RBP16.68■□□□□ 0.26
CTSB-219ENST00000530640 SPATA31D3P0C874 917 aa16.68■□□□□ 0.26
CTSB-219ENST00000530640 UCHL3P15374 230 aa16.68■□□□□ 0.26
CTSB-219ENST00000530640 LRPAP1P30533 357 aa16.68■□□□□ 0.26
CTSB-219ENST00000530640 GUCY2FP51841 1108 aa16.68■□□□□ 0.26
CTSB-219ENST00000530640 PHLDB3Q6NSJ2 640 aa16.68■□□□□ 0.26
CTSB-219ENST00000530640 SPATA31D4Q6ZUB0 917 aa16.68■□□□□ 0.26
CTSB-219ENST00000530640 CCDC105Q8IYK2 499 aa16.68■□□□□ 0.26
CTSB-219ENST00000530640 LNX1Q8TBB1 728 aaPredicted RBP16.68■□□□□ 0.26
CTSB-219ENST00000530640 BAP1Q92560 729 aa16.68■□□□□ 0.26
CTSB-219ENST00000530640 DDX27Q96GQ7 796 aaKnown RBP16.68■□□□□ 0.26
CTSB-219ENST00000530640 PCMTD1Q96MG8 357 aaPredicted RBP16.68■□□□□ 0.26
CTSB-219ENST00000530640 NAA15Q9BXJ9 866 aaKnown RBP16.68■□□□□ 0.26
CTSB-219ENST00000530640 EDEM3Q9BZQ6 932 aa16.68■□□□□ 0.26
CTSB-219ENST00000530640 CEP72Q9P209 647 aa16.68■□□□□ 0.26
CTSB-219ENST00000530640 AJAP1Q9UKB5 411 aaPredicted RBP16.68■□□□□ 0.26
CTSB-219ENST00000530640 FHOD1Q9Y613 1164 aa16.68■□□□□ 0.26
CTSB-219ENST00000530640 FAM186AA6NE01 2351 aa16.68■□□□□ 0.26
CTSB-219ENST00000530640 PODXLO00592 558 aa16.67■□□□□ 0.26
CTSB-219ENST00000530640 TRAPPC3O43617 180 aa16.67■□□□□ 0.26
CTSB-219ENST00000530640 MFAP3LO75121 409 aa16.67■□□□□ 0.26
CTSB-219ENST00000530640 PHACTR2O75167 634 aa16.67■□□□□ 0.26
CTSB-219ENST00000530640 CST3P01034 146 aaPredicted RBP16.67■□□□□ 0.26
CTSB-219ENST00000530640 FGFR3P22607 806 aa16.67■□□□□ 0.26
CTSB-219ENST00000530640 POLR2BP30876 1174 aaKnown RBP16.67■□□□□ 0.26
CTSB-219ENST00000530640 MYL6P60660 151 aa16.67■□□□□ 0.26
CTSB-219ENST00000530640 NOP14P78316 857 aaKnown RBP16.67■□□□□ 0.26
CTSB-219ENST00000530640 ARID5BQ14865 1188 aa16.67■□□□□ 0.26
CTSB-219ENST00000530640 ARHGEF19Q8IW93 802 aa16.67■□□□□ 0.26
CTSB-219ENST00000530640 DRC7Q8IY82 874 aa16.67■□□□□ 0.26
CTSB-219ENST00000530640 C3orf58Q8NDZ4 430 aa16.67■□□□□ 0.26
CTSB-219ENST00000530640 FLCNQ8NFG4 579 aa16.67■□□□□ 0.26
CTSB-219ENST00000530640 PI4K2AQ9BTU6 479 aa16.67■□□□□ 0.26
CTSB-219ENST00000530640 APOBEC3GQ9HC16 384 aaKnown RBP16.67■□□□□ 0.26
CTSB-219ENST00000530640 CAPN11Q9UMQ6 739 aa16.67■□□□□ 0.26
CTSB-219ENST00000530640 RNF225M0QZC1 329 aaPredicted RBP16.66■□□□□ 0.26
CTSB-219ENST00000530640 RFPL2O75678 378 aa16.66■□□□□ 0.26
CTSB-219ENST00000530640 NPR3P17342 541 aa16.66■□□□□ 0.26
CTSB-219ENST00000530640 ATICP31939 592 aa16.66■□□□□ 0.26
CTSB-219ENST00000530640 CASP14P31944 242 aa16.66■□□□□ 0.26
CTSB-219ENST00000530640 GBP2P32456 591 aaPredicted RBP16.66■□□□□ 0.26
CTSB-219ENST00000530640 BRCC3P46736 316 aa16.66■□□□□ 0.26
CTSB-219ENST00000530640 GCNT1Q02742 428 aa16.66■□□□□ 0.26
CTSB-219ENST00000530640 ZNF699Q32M78 642 aa16.66■□□□□ 0.26
CTSB-219ENST00000530640 LIN9Q5TKA1 542 aa16.66■□□□□ 0.26
CTSB-219ENST00000530640 C9orf57Q5W0N0 161 aa16.66■□□□□ 0.26
CTSB-219ENST00000530640 CWF19L1Q69YN2 538 aaKnown RBP16.66■□□□□ 0.26
CTSB-219ENST00000530640 IQCEQ6IPM2 695 aa16.66■□□□□ 0.26
CTSB-219ENST00000530640 GJB7Q6PEY0 223 aa16.66■□□□□ 0.26
CTSB-219ENST00000530640 LRRC52Q8N7C0 313 aa16.66■□□□□ 0.26
CTSB-219ENST00000530640 SMG7Q92540 1137 aaKnown RBP16.66■□□□□ 0.26
CTSB-219ENST00000530640 TAF4BQ92750 862 aa16.66■□□□□ 0.26
CTSB-219ENST00000530640 NT5C1BQ96P26 610 aa16.66■□□□□ 0.26
CTSB-219ENST00000530640 CLSTN3Q9BQT9 956 aa16.66■□□□□ 0.26
CTSB-219ENST00000530640 IMPG2Q9BZV3 1241 aa16.66■□□□□ 0.26
CTSB-219ENST00000530640 SMOC2Q9H3U7 446 aa16.66■□□□□ 0.26
CTSB-219ENST00000530640 NUB1Q9Y5A7 615 aa16.66■□□□□ 0.26
CTSB-219ENST00000530640 USP34Q70CQ2 3546 aa16.66■□□□□ 0.26
CTSB-219ENST00000530640 MTCL1Q9Y4B5 1905 aaKnown RBP16.66■□□□□ 0.26
CTSB-219ENST00000530640 CLUHO75153 1309 aa16.66■□□□□ 0.26
CTSB-219ENST00000530640 TSC2P49815 1807 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms