RNA–Protein interactions for RNA: ENST00000530579.6

NEDD8-MDP1-201, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 2

Gene NEDD8-MDP1, Length 471 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-201ENST00000530579 ARHGAP17Q68EM7 881 aa9.03□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 ZNF280DQ6N043 979 aa9.03□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 ALKBH5Q6P6C2 394 aaKnown RBP9.03□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 PRSS55Q6UWB4 352 aaPredicted RBP9.03□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 LCLAT1Q6UWP7 414 aa9.03□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 TRIM72Q6ZMU5 477 aa9.03□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 ANKS3Q6ZW76 656 aa9.03□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 DDX53Q86TM3 631 aaKnown RBP9.03□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 DCP1BQ8IZD4 617 aaKnown RBP9.03□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 KLHL23Q8NBE8 558 aa9.03□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 TMEM35BQ8NCS4 154 aa9.03□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 ACRBPQ8NEB7 543 aa9.03□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 OR10T2Q8NGX3 314 aa9.03□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 SLC30A5Q8TAD4 765 aa9.03□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 MYCBPAPQ8TBZ2 947 aa9.03□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 SLC2A14Q8TDB8 520 aa9.03□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 CPA5Q8WXQ8 436 aa9.03□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 RTP3Q9BQQ7 232 aa9.03□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 ZSWIM1Q9BR11 485 aa9.03□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 SYT11Q9BT88 431 aa9.03□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 CRTAC1Q9NQ79 661 aa9.03□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 MSRAQ9UJ68 235 aa9.03□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 NAGPAQ9UK23 515 aa9.03□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 GTF3C4Q9UKN8 822 aa9.03□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 MTUS1Q9ULD2 1270 aa9.03□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 RWDD3Q9Y3V2 267 aa9.03□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 CEP83Q9Y592 693 aa9.03□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 PCDHA13Q9Y5I0 950 aa9.03□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 PCDHA11Q9Y5I1 949 aa9.03□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 RALGAPA2Q2PPJ7 1873 aa9.02□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 OR6C75A6NL08 312 aa9.02□□□□□ -0.97
NEDD8-MDP1-201ENST00000530579 M0QYV0 167 aa9.02□□□□□ -0.97
NEDD8-MDP1-201ENST00000530579 O00370 1275 aa9.02□□□□□ -0.97
NEDD8-MDP1-201ENST00000530579 CLDN5O00501 218 aa9.02□□□□□ -0.97
NEDD8-MDP1-201ENST00000530579 RTN2O75298 545 aa9.02□□□□□ -0.97
NEDD8-MDP1-201ENST00000530579 LSM8O95777 96 aaKnown RBP9.02□□□□□ -0.97
NEDD8-MDP1-201ENST00000530579 SOD2P04179 222 aa9.02□□□□□ -0.97
NEDD8-MDP1-201ENST00000530579 URODP06132 367 aa9.02□□□□□ -0.97
NEDD8-MDP1-201ENST00000530579 CA3P07451 260 aa9.02□□□□□ -0.97
NEDD8-MDP1-201ENST00000530579 H2AFZP0C0S5 128 aa9.02□□□□□ -0.97
NEDD8-MDP1-201ENST00000530579 OR4Q2P0C623 313 aa9.02□□□□□ -0.97
NEDD8-MDP1-201ENST00000530579 NSFP46459 744 aaKnown RBP9.02□□□□□ -0.97
NEDD8-MDP1-201ENST00000530579 GLUD2P49448 558 aa9.02□□□□□ -0.97
NEDD8-MDP1-201ENST00000530579 SLC8A3P57103 927 aa9.02□□□□□ -0.97
NEDD8-MDP1-201ENST00000530579 PLCB3Q01970 1234 aa9.02□□□□□ -0.97
NEDD8-MDP1-201ENST00000530579 MRPL58Q14197 206 aaKnown RBP9.02□□□□□ -0.97
NEDD8-MDP1-201ENST00000530579 MAPRE1Q15691 268 aaKnown RBP9.02□□□□□ -0.97
NEDD8-MDP1-201ENST00000530579 PSMD5Q16401 504 aa9.02□□□□□ -0.97
NEDD8-MDP1-201ENST00000530579 SLC39A12Q504Y0 691 aa9.02□□□□□ -0.97
NEDD8-MDP1-201ENST00000530579 C10orf76Q5T2E6 689 aa9.02□□□□□ -0.97
NEDD8-MDP1-201ENST00000530579 ACAD10Q6JQN1 1059 aa9.02□□□□□ -0.97
NEDD8-MDP1-201ENST00000530579 H2AFVQ71UI9 128 aa9.02□□□□□ -0.97
NEDD8-MDP1-201ENST00000530579 SPATA2LQ8IUW3 424 aaPredicted RBP9.02□□□□□ -0.97
NEDD8-MDP1-201ENST00000530579 VPS52Q8N1B4 723 aa9.02□□□□□ -0.97
NEDD8-MDP1-201ENST00000530579 TXLNBQ8N3L3 684 aa9.02□□□□□ -0.97
NEDD8-MDP1-201ENST00000530579 CLP1Q92989 425 aaKnown RBP9.02□□□□□ -0.97
NEDD8-MDP1-201ENST00000530579 TMEM209Q96SK2 561 aa9.02□□□□□ -0.97
NEDD8-MDP1-201ENST00000530579 HNRNPABQ99729 332 aaKnown RBP9.02□□□□□ -0.97
NEDD8-MDP1-201ENST00000530579 C17orf80Q9BSJ5 609 aa9.02□□□□□ -0.97
NEDD8-MDP1-201ENST00000530579 HERC2P3Q9BVR0 1158 aa9.02□□□□□ -0.97
NEDD8-MDP1-201ENST00000530579 VN1R3Q9BXE9 311 aa9.02□□□□□ -0.97
NEDD8-MDP1-201ENST00000530579 OXCT2Q9BYC2 517 aaPredicted RBP9.02□□□□□ -0.97
NEDD8-MDP1-201ENST00000530579 B3GNT5Q9BYG0 378 aa9.02□□□□□ -0.97
NEDD8-MDP1-201ENST00000530579 ZCWPW1Q9H0M4 648 aa9.02□□□□□ -0.97
NEDD8-MDP1-201ENST00000530579 LHX5Q9H2C1 402 aa9.02□□□□□ -0.97
NEDD8-MDP1-201ENST00000530579 TRMT1Q9NXH9 659 aaKnown RBP9.02□□□□□ -0.97
NEDD8-MDP1-201ENST00000530579 STK39Q9UEW8 545 aa9.02□□□□□ -0.97
NEDD8-MDP1-201ENST00000530579 TSPAN16Q9UKR8 245 aa9.02□□□□□ -0.97
NEDD8-MDP1-201ENST00000530579 PCDHGC3Q9UN70 934 aa9.02□□□□□ -0.97
NEDD8-MDP1-201ENST00000530579 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.02□□□□□ -0.97
NEDD8-MDP1-201ENST00000530579 ZKSCAN5Q9Y2L8 839 aa9.02□□□□□ -0.97
NEDD8-MDP1-201ENST00000530579 PPP2R2CQ9Y2T4 447 aa9.02□□□□□ -0.97
NEDD8-MDP1-201ENST00000530579 ADGRG1Q9Y653 693 aa9.02□□□□□ -0.97
NEDD8-MDP1-201ENST00000530579 ATP8B3O60423 1300 aa9.02□□□□□ -0.97
NEDD8-MDP1-201ENST00000530579 ALPK3Q96L96 1907 aa9.01□□□□□ -0.97
NEDD8-MDP1-201ENST00000530579 TET1Q8NFU7 2136 aa9.01□□□□□ -0.97
NEDD8-MDP1-201ENST00000530579 ZNF263O14978 683 aa9.01□□□□□ -0.97
NEDD8-MDP1-201ENST00000530579 CCP110O43303 1012 aa9.01□□□□□ -0.97
NEDD8-MDP1-201ENST00000530579 LCA5LO95447 670 aa9.01□□□□□ -0.97
NEDD8-MDP1-201ENST00000530579 CXCL14O95715 111 aa9.01□□□□□ -0.97
NEDD8-MDP1-201ENST00000530579 EFEMP2O95967 443 aa9.01□□□□□ -0.97
NEDD8-MDP1-201ENST00000530579 CYP1A1P04798 512 aaPredicted RBP9.01□□□□□ -0.97
NEDD8-MDP1-201ENST00000530579 RB1P06400 928 aa9.01□□□□□ -0.97
NEDD8-MDP1-201ENST00000530579 FAM200BP0CF97 657 aa9.01□□□□□ -0.97
NEDD8-MDP1-201ENST00000530579 GZMAP12544 262 aa9.01□□□□□ -0.97
NEDD8-MDP1-201ENST00000530579 CPB1P15086 417 aa9.01□□□□□ -0.97
NEDD8-MDP1-201ENST00000530579 ANK1P16157 1881 aa9.01□□□□□ -0.97
NEDD8-MDP1-201ENST00000530579 ABCB4P21439 1286 aa9.01□□□□□ -0.97
NEDD8-MDP1-201ENST00000530579 DNAJB2P25686 324 aa9.01□□□□□ -0.97
NEDD8-MDP1-201ENST00000530579 MSNP26038 577 aaKnown RBP9.01□□□□□ -0.97
NEDD8-MDP1-201ENST00000530579 BMP8BP34820 402 aa9.01□□□□□ -0.97
NEDD8-MDP1-201ENST00000530579 PBX2P40425 430 aa9.01□□□□□ -0.97
NEDD8-MDP1-201ENST00000530579 RGS19P49795 217 aa9.01□□□□□ -0.97
NEDD8-MDP1-201ENST00000530579 DSG1Q02413 1049 aa9.01□□□□□ -0.97
NEDD8-MDP1-201ENST00000530579 RAB30Q15771 203 aa9.01□□□□□ -0.97
NEDD8-MDP1-201ENST00000530579 NFE2Q16621 373 aaPredicted RBP9.01□□□□□ -0.97
NEDD8-MDP1-201ENST00000530579 CCDC142Q17RM4 750 aa9.01□□□□□ -0.97
NEDD8-MDP1-201ENST00000530579 LIN9Q5TKA1 542 aa9.01□□□□□ -0.97
NEDD8-MDP1-201ENST00000530579 PPP1R2P3Q6NXS1 205 aa9.01□□□□□ -0.97
NEDD8-MDP1-201ENST00000530579 FAM171BQ6P995 826 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms