RNA–Protein interactions for RNA: ENST00000530339.1

PCDHA4-203, Transcript of protocadherin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA4, Length 5,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-203ENST00000530339 TASP1Q9H6P5 420 aa16.09■□□□□ 0.17
PCDHA4-203ENST00000530339 HBP1O60381 514 aa16.09■□□□□ 0.17
PCDHA4-203ENST00000530339 ESRRBO95718 433 aa16.09■□□□□ 0.17
PCDHA4-203ENST00000530339 APOA4P06727 396 aa16.09■□□□□ 0.17
PCDHA4-203ENST00000530339 HSPA1AP0DMV8 641 aaKnown RBP16.09■□□□□ 0.17
PCDHA4-203ENST00000530339 HSPA1BP0DMV9 641 aaKnown RBP16.09■□□□□ 0.17
PCDHA4-203ENST00000530339 USP10Q14694 798 aaKnown RBP16.09■□□□□ 0.17
PCDHA4-203ENST00000530339 SEC23AQ15436 765 aa16.09■□□□□ 0.17
PCDHA4-203ENST00000530339 TAF1CQ15572 869 aaPredicted RBP16.09■□□□□ 0.17
PCDHA4-203ENST00000530339 YAF2Q8IY57 180 aa16.09■□□□□ 0.17
PCDHA4-203ENST00000530339 PMS1P54277 932 aaKnown RBP16.09■□□□□ 0.17
PCDHA4-203ENST00000530339 BOLA3Q53S33 107 aa16.09■□□□□ 0.17
PCDHA4-203ENST00000530339 TMC3Q7Z5M5 1100 aa16.09■□□□□ 0.17
PCDHA4-203ENST00000530339 CREG2Q8IUH2 290 aa16.09■□□□□ 0.17
PCDHA4-203ENST00000530339 SLC16A10Q8TF71 515 aa16.09■□□□□ 0.17
PCDHA4-203ENST00000530339 ZNF518BQ9C0D4 1074 aa16.09■□□□□ 0.17
PCDHA4-203ENST00000530339 SEMA4AQ9H3S1 761 aa16.09■□□□□ 0.17
PCDHA4-203ENST00000530339 OSGEPQ9NPF4 335 aa16.09■□□□□ 0.17
PCDHA4-203ENST00000530339 GDF3Q9NR23 364 aa16.09■□□□□ 0.17
PCDHA4-203ENST00000530339 KIF20BQ96Q89 1820 aa16.09■□□□□ 0.17
PCDHA4-203ENST00000530339 KCNQ2O43526 872 aa16.09■□□□□ 0.17
PCDHA4-203ENST00000530339 DAB1O75553 588 aa16.09■□□□□ 0.17
PCDHA4-203ENST00000530339 GPD1P21695 349 aa16.09■□□□□ 0.17
PCDHA4-203ENST00000530339 DAB2P98082 770 aa16.09■□□□□ 0.17
PCDHA4-203ENST00000530339 MEA1Q16626 185 aa16.09■□□□□ 0.17
PCDHA4-203ENST00000530339 EPC2Q52LR7 807 aa16.09■□□□□ 0.17
PCDHA4-203ENST00000530339 PCDHB8Q9UN66 801 aa16.09■□□□□ 0.17
PCDHA4-203ENST00000530339 ZNF197O14709 1029 aa16.08■□□□□ 0.17
PCDHA4-203ENST00000530339 SRP72O76094 671 aaKnown RBP16.08■□□□□ 0.17
PCDHA4-203ENST00000530339 POLBP06746 335 aa16.08■□□□□ 0.17
PCDHA4-203ENST00000530339 KCNA2P16389 499 aa16.08■□□□□ 0.17
PCDHA4-203ENST00000530339 ERVK-9P63128 1117 aa16.08■□□□□ 0.17
PCDHA4-203ENST00000530339 Q4G0T1 1027 aa16.08■□□□□ 0.17
PCDHA4-203ENST00000530339 SCUBE1Q8IWY4 988 aa16.08■□□□□ 0.17
PCDHA4-203ENST00000530339 ZNF507Q8TCN5 953 aa16.08■□□□□ 0.17
PCDHA4-203ENST00000530339 DDI1Q8WTU0 396 aa16.08■□□□□ 0.17
PCDHA4-203ENST00000530339 SCFD2Q8WU76 684 aa16.08■□□□□ 0.17
PCDHA4-203ENST00000530339 APBB2Q92870 758 aa16.08■□□□□ 0.17
PCDHA4-203ENST00000530339 AGAP3Q96P47 875 aa16.08■□□□□ 0.17
PCDHA4-203ENST00000530339 SALL1Q9NSC2 1324 aa16.08■□□□□ 0.16
PCDHA4-203ENST00000530339 FAM153BP0C7A2 387 aa16.08■□□□□ 0.16
PCDHA4-203ENST00000530339 ATP6V1B1P15313 513 aa16.08■□□□□ 0.16
PCDHA4-203ENST00000530339 SNX17Q15036 470 aa16.08■□□□□ 0.16
PCDHA4-203ENST00000530339 FAM153CQ494X1 144 aa16.08■□□□□ 0.16
PCDHA4-203ENST00000530339 LRRC8BQ6P9F7 803 aa16.08■□□□□ 0.16
PCDHA4-203ENST00000530339 ATXN2LQ8WWM7 1075 aaKnown RBP16.08■□□□□ 0.16
PCDHA4-203ENST00000530339 FAM153AQ9UHL3 310 aa16.08■□□□□ 0.16
PCDHA4-203ENST00000530339 LRRC10BA6NIK2 292 aa16.08■□□□□ 0.16
PCDHA4-203ENST00000530339 ATICP31939 592 aa16.08■□□□□ 0.16
PCDHA4-203ENST00000530339 HADHAP40939 763 aa16.08■□□□□ 0.16
PCDHA4-203ENST00000530339 MROH9Q5TGP6 573 aa16.08■□□□□ 0.16
PCDHA4-203ENST00000530339 FAM71DQ8N9W8 422 aa16.08■□□□□ 0.16
PCDHA4-203ENST00000530339 AGBL3Q8NEM8 1001 aa16.08■□□□□ 0.16
PCDHA4-203ENST00000530339 RMDN2Q96LZ7 410 aa16.08■□□□□ 0.16
PCDHA4-203ENST00000530339 PAPOLBQ9NRJ5 636 aaKnown RBP16.08■□□□□ 0.16
PCDHA4-203ENST00000530339 MAPTP10636 758 aaKnown RBP16.08■□□□□ 0.16
PCDHA4-203ENST00000530339 BTKQ06187 659 aa16.08■□□□□ 0.16
PCDHA4-203ENST00000530339 ATF7IP2Q5U623 682 aa16.08■□□□□ 0.16
PCDHA4-203ENST00000530339 YTHDF3Q7Z739 585 aaKnown RBP16.08■□□□□ 0.16
PCDHA4-203ENST00000530339 LINC00116Q8NCU8 138 aa16.08■□□□□ 0.16
PCDHA4-203ENST00000530339 ZNF555Q8NEP9 628 aa16.08■□□□□ 0.16
PCDHA4-203ENST00000530339 OR6J1Q8NGC5 347 aa16.08■□□□□ 0.16
PCDHA4-203ENST00000530339 AFG1LQ8WV93 481 aa16.08■□□□□ 0.16
PCDHA4-203ENST00000530339 C15orf41Q9Y2V0 281 aa16.08■□□□□ 0.16
PCDHA4-203ENST00000530339 RRN3P2A6NIE6 340 aa16.07■□□□□ 0.16
PCDHA4-203ENST00000530339 PJA2O43164 708 aa16.07■□□□□ 0.16
PCDHA4-203ENST00000530339 ZCCHC18P0CG32 403 aa16.07■□□□□ 0.16
PCDHA4-203ENST00000530339 LCP1P13796 627 aa16.07■□□□□ 0.16
PCDHA4-203ENST00000530339 GFAPP14136 432 aa16.07■□□□□ 0.16
PCDHA4-203ENST00000530339 FDFT1P37268 417 aa16.07■□□□□ 0.16
PCDHA4-203ENST00000530339 FUKQ8N0W3 1084 aa16.07■□□□□ 0.16
PCDHA4-203ENST00000530339 DDX28Q9NUL7 540 aaKnown RBP16.07■□□□□ 0.16
PCDHA4-203ENST00000530339 TJP2Q9UDY2 1190 aa16.07■□□□□ 0.16
PCDHA4-203ENST00000530339 SLC24A2Q9UI40 661 aa16.07■□□□□ 0.16
PCDHA4-203ENST00000530339 TBX20Q9UMR3 447 aa16.07■□□□□ 0.16
PCDHA4-203ENST00000530339 XPO1O14980 1071 aaKnown RBP16.07■□□□□ 0.16
PCDHA4-203ENST00000530339 H2AFYO75367 372 aaKnown RBP16.07■□□□□ 0.16
PCDHA4-203ENST00000530339 TFRCP02786 760 aaKnown RBP16.07■□□□□ 0.16
PCDHA4-203ENST00000530339 GARTP22102 1010 aa16.07■□□□□ 0.16
PCDHA4-203ENST00000530339 DCAF4L1Q3SXM0 396 aa16.07■□□□□ 0.16
PCDHA4-203ENST00000530339 GPAT2Q6NUI2 795 aa16.07■□□□□ 0.16
PCDHA4-203ENST00000530339 KIAA2013Q8IYS2 634 aa16.07■□□□□ 0.16
PCDHA4-203ENST00000530339 EIF1ADQ8N9N8 165 aaKnown RBP16.07■□□□□ 0.16
PCDHA4-203ENST00000530339 TMC2Q8TDI7 906 aa16.07■□□□□ 0.16
PCDHA4-203ENST00000530339 ZC4H2Q9NQZ6 224 aa16.07■□□□□ 0.16
PCDHA4-203ENST00000530339 HNRNPRO43390 633 aaKnown RBP16.07■□□□□ 0.16
PCDHA4-203ENST00000530339 RPS6KA5O75582 802 aa16.07■□□□□ 0.16
PCDHA4-203ENST00000530339 ICAM1P05362 532 aa16.07■□□□□ 0.16
PCDHA4-203ENST00000530339 SREBF1P36956 1147 aa16.07■□□□□ 0.16
PCDHA4-203ENST00000530339 ADRM1Q16186 407 aa16.07■□□□□ 0.16
PCDHA4-203ENST00000530339 PKN1Q16512 942 aa16.07■□□□□ 0.16
PCDHA4-203ENST00000530339 WASHC2DQ5SRD0 308 aa16.07■□□□□ 0.16
PCDHA4-203ENST00000530339 MTDHQ86UE4 582 aaKnown RBP16.07■□□□□ 0.16
PCDHA4-203ENST00000530339 SPATA2LQ8IUW3 424 aaPredicted RBP16.07■□□□□ 0.16
PCDHA4-203ENST00000530339 ZNF668Q96K58 619 aaPredicted RBP16.07■□□□□ 0.16
PCDHA4-203ENST00000530339 CATSPERBQ9H7T0 1116 aa16.07■□□□□ 0.16
PCDHA4-203ENST00000530339 ITGA4P13612 1032 aa16.07■□□□□ 0.16
PCDHA4-203ENST00000530339 TCN1P20061 433 aaPredicted RBP16.07■□□□□ 0.16
PCDHA4-203ENST00000530339 PCSK1P29120 753 aa16.07■□□□□ 0.16
PCDHA4-203ENST00000530339 ATXN3P54252 364 aaPredicted RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms