RNA–Protein interactions for RNA: ENST00000530309.1

CASP4-208, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-208ENST00000530309 CARSP49589 748 aaKnown RBP7.22□□□□□ -1.25
CASP4-208ENST00000530309 RPS7P62081 194 aaKnown RBP7.22□□□□□ -1.25
CASP4-208ENST00000530309 FPGSQ05932 587 aa7.22□□□□□ -1.25
CASP4-208ENST00000530309 PMS2P11Q13670 270 aa7.22□□□□□ -1.25
CASP4-208ENST00000530309 PLA1AQ53H76 456 aa7.22□□□□□ -1.25
CASP4-208ENST00000530309 C10orf62Q5T681 223 aaPredicted RBP7.22□□□□□ -1.25
CASP4-208ENST00000530309 C1orf228Q6PIY5 440 aa7.22□□□□□ -1.25
CASP4-208ENST00000530309 LAYNQ6UX15 382 aa7.22□□□□□ -1.25
CASP4-208ENST00000530309 RNF44Q7L0R7 432 aa7.22□□□□□ -1.25
CASP4-208ENST00000530309 SKAP1Q86WV1 359 aa7.22□□□□□ -1.25
CASP4-208ENST00000530309 CPEB3Q8NE35 698 aaKnown RBP7.22□□□□□ -1.25
CASP4-208ENST00000530309 SLC25A43Q8WUT9 341 aaPredicted RBP7.22□□□□□ -1.25
CASP4-208ENST00000530309 KIAA1191Q96A73 305 aa7.22□□□□□ -1.25
CASP4-208ENST00000530309 NACC2Q96BF6 587 aa7.22□□□□□ -1.25
CASP4-208ENST00000530309 ARFGAP3Q9NP61 516 aa7.22□□□□□ -1.25
CASP4-208ENST00000530309 TMEM74BQ9NUR3 256 aa7.22□□□□□ -1.25
CASP4-208ENST00000530309 MYO1AQ9UBC5 1043 aa7.22□□□□□ -1.25
CASP4-208ENST00000530309 SHOC2Q9UQ13 582 aa7.22□□□□□ -1.25
CASP4-208ENST00000530309 ARID4BQ4LE39 1312 aaPredicted RBP7.22□□□□□ -1.25
CASP4-208ENST00000530309 SPATA31A3Q5VYP0 1347 aa7.22□□□□□ -1.25
CASP4-208ENST00000530309 ABHD14A-ACY1A0A1B0GW23 586 aa7.21□□□□□ -1.26
CASP4-208ENST00000530309 ITGALP20701 1170 aa7.21□□□□□ -1.26
CASP4-208ENST00000530309 DDX6P26196 483 aaKnown RBP eCLIP7.21□□□□□ -1.26
CASP4-208ENST00000530309 ZFP36P26651 326 aaKnown RBP7.21□□□□□ -1.26
CASP4-208ENST00000530309 PXNP49023 591 aaPredicted RBP7.21□□□□□ -1.26
CASP4-208ENST00000530309 ZNF134P52741 427 aa7.21□□□□□ -1.26
CASP4-208ENST00000530309 SATB1Q01826 763 aa7.21□□□□□ -1.26
CASP4-208ENST00000530309 HLXQ14774 488 aaPredicted RBP7.21□□□□□ -1.26
CASP4-208ENST00000530309 GEN1Q17RS7 908 aa7.21□□□□□ -1.26
CASP4-208ENST00000530309 ARL13BQ3SXY8 428 aa7.21□□□□□ -1.26
CASP4-208ENST00000530309 PREPLQ4J6C6 727 aaPredicted RBP7.21□□□□□ -1.26
CASP4-208ENST00000530309 ZDHHC24Q6UX98 284 aa7.21□□□□□ -1.26
CASP4-208ENST00000530309 BEND5Q7L4P6 421 aa7.21□□□□□ -1.26
CASP4-208ENST00000530309 YAF2Q8IY57 180 aa7.21□□□□□ -1.26
CASP4-208ENST00000530309 ADGRG5Q8IZF4 528 aa7.21□□□□□ -1.26
CASP4-208ENST00000530309 MYEOVQ96EZ4 313 aa7.21□□□□□ -1.26
CASP4-208ENST00000530309 PLEKHG4BQ96PX9 1271 aa7.21□□□□□ -1.26
CASP4-208ENST00000530309 ARPC5LQ9BPX5 153 aa7.21□□□□□ -1.26
CASP4-208ENST00000530309 VPS11Q9H270 941 aa7.21□□□□□ -1.26
CASP4-208ENST00000530309 XPNPEP3Q9NQH7 507 aa7.21□□□□□ -1.26
CASP4-208ENST00000530309 GPRC5BQ9NZH0 403 aa7.21□□□□□ -1.26
CASP4-208ENST00000530309 HDAC9Q9UKV0 1011 aa7.21□□□□□ -1.26
CASP4-208ENST00000530309 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.21□□□□□ -1.26
CASP4-208ENST00000530309 LOC102723971A0A1B0GUV8 181 aa7.2□□□□□ -1.26
CASP4-208ENST00000530309 CDKL5O76039 1030 aa7.2□□□□□ -1.26
CASP4-208ENST00000530309 PEX11BO96011 259 aa7.2□□□□□ -1.26
CASP4-208ENST00000530309 ABCB4P21439 1286 aa7.2□□□□□ -1.26
CASP4-208ENST00000530309 NDUFV1P49821 464 aa7.2□□□□□ -1.26
CASP4-208ENST00000530309 VAV2P52735 878 aa7.2□□□□□ -1.26
CASP4-208ENST00000530309 LOXL3P58215 753 aa7.2□□□□□ -1.26
CASP4-208ENST00000530309 LILRA4P59901 499 aa7.2□□□□□ -1.26
CASP4-208ENST00000530309 MGAT5BQ3V5L5 792 aa7.2□□□□□ -1.26
CASP4-208ENST00000530309 CD300EQ496F6 205 aaPredicted RBP7.2□□□□□ -1.26
CASP4-208ENST00000530309 SP5Q6BEB4 398 aaPredicted RBP7.2□□□□□ -1.26
CASP4-208ENST00000530309 TMEM108Q6UXF1 575 aa7.2□□□□□ -1.26
CASP4-208ENST00000530309 MICALCLQ6ZW33 695 aa7.2□□□□□ -1.26
CASP4-208ENST00000530309 COLGALT2Q8IYK4 626 aa7.2□□□□□ -1.26
CASP4-208ENST00000530309 SNX19Q92543 992 aa7.2□□□□□ -1.26
CASP4-208ENST00000530309 TMEM125Q96AQ2 219 aa7.2□□□□□ -1.26
CASP4-208ENST00000530309 PPP1R9BQ96SB3 815 aa7.2□□□□□ -1.26
CASP4-208ENST00000530309 SELENOOQ9BVL4 669 aa7.2□□□□□ -1.26
CASP4-208ENST00000530309 DKK2Q9UBU2 259 aa7.2□□□□□ -1.26
CASP4-208ENST00000530309 ZNF212Q9UDV6 495 aa7.2□□□□□ -1.26
CASP4-208ENST00000530309 TBC1D30Q9Y2I9 924 aa7.2□□□□□ -1.26
CASP4-208ENST00000530309 TMEM200CA6NKL6 621 aa7.19□□□□□ -1.26
CASP4-208ENST00000530309 CLCA1A8K7I4 914 aa7.19□□□□□ -1.26
CASP4-208ENST00000530309 F5H697 171 aa7.19□□□□□ -1.26
CASP4-208ENST00000530309 AREL1O15033 823 aa7.19□□□□□ -1.26
CASP4-208ENST00000530309 INMTO95050 263 aa7.19□□□□□ -1.26
CASP4-208ENST00000530309 C1SP09871 688 aa7.19□□□□□ -1.26
CASP4-208ENST00000530309 HARSP12081 509 aaKnown RBP7.19□□□□□ -1.26
CASP4-208ENST00000530309 BTF3P20290 206 aaKnown RBP7.19□□□□□ -1.26
CASP4-208ENST00000530309 IL1R2P27930 398 aa7.19□□□□□ -1.26
CASP4-208ENST00000530309 LRPAP1P30533 357 aa7.19□□□□□ -1.26
CASP4-208ENST00000530309 NPTX2P47972 431 aa7.19□□□□□ -1.26
CASP4-208ENST00000530309 KRT17Q04695 432 aa7.19□□□□□ -1.26
CASP4-208ENST00000530309 SLC29A2Q14542 456 aa7.19□□□□□ -1.26
CASP4-208ENST00000530309 INSCQ1MX18 579 aa7.19□□□□□ -1.26
CASP4-208ENST00000530309 CATSPERGQ6ZRH7 1159 aa7.19□□□□□ -1.26
CASP4-208ENST00000530309 ZNF280BQ86YH2 543 aa7.19□□□□□ -1.26
CASP4-208ENST00000530309 FAM9AQ8IZU1 332 aaPredicted RBP7.19□□□□□ -1.26
CASP4-208ENST00000530309 ENAHQ8N8S7 591 aaPredicted RBP7.19□□□□□ -1.26
CASP4-208ENST00000530309 VPS37AQ8NEZ2 397 aa7.19□□□□□ -1.26
CASP4-208ENST00000530309 MORC4Q8TE76 937 aa7.19□□□□□ -1.26
CASP4-208ENST00000530309 CACTINQ8WUQ7 758 aaKnown RBP7.19□□□□□ -1.26
CASP4-208ENST00000530309 ADAM2Q99965 735 aa7.19□□□□□ -1.26
CASP4-208ENST00000530309 PTDSS2Q9BVG9 487 aa7.19□□□□□ -1.26
CASP4-208ENST00000530309 GJB4Q9NTQ9 266 aa7.19□□□□□ -1.26
CASP4-208ENST00000530309 TRMT13Q9NUP7 481 aaKnown RBP7.19□□□□□ -1.26
CASP4-208ENST00000530309 MID2Q9UJV3 735 aa7.19□□□□□ -1.26
CASP4-208ENST00000530309 FZD1Q9UP38 647 aa7.19□□□□□ -1.26
CASP4-208ENST00000530309 PCDHGB2Q9Y5G2 931 aa7.19□□□□□ -1.26
CASP4-208ENST00000530309 A0A0B4J269 797 aa7.18□□□□□ -1.26
CASP4-208ENST00000530309 CCP110O43303 1012 aa7.18□□□□□ -1.26
CASP4-208ENST00000530309 TRIAP1O43715 76 aa7.18□□□□□ -1.26
CASP4-208ENST00000530309 PPFIA4O75335 1185 aa7.18□□□□□ -1.26
CASP4-208ENST00000530309 FOSP01100 380 aaPredicted RBP7.18□□□□□ -1.26
CASP4-208ENST00000530309 PPM1AP35813 382 aa7.18□□□□□ -1.26
CASP4-208ENST00000530309 HSPA7P48741 367 aa7.18□□□□□ -1.26
CASP4-208ENST00000530309 TUBB3Q13509 450 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms