RNA–Protein interactions for RNA: ENST00000530008.1

CAPRIN1-208, Transcript of cell cycle associated protein 1, humanhuman

TSL 4

Gene CAPRIN1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-208ENST00000530008 CD4P01730 458 aa7.41□□□□□ -1.22
CAPRIN1-208ENST00000530008 JUNBP17275 347 aaPredicted RBP7.41□□□□□ -1.22
CAPRIN1-208ENST00000530008 ATICP31939 592 aa7.41□□□□□ -1.22
CAPRIN1-208ENST00000530008 ADD2P35612 726 aa7.41□□□□□ -1.22
CAPRIN1-208ENST00000530008 PNLIPRP1P54315 467 aa7.41□□□□□ -1.22
CAPRIN1-208ENST00000530008 EIF5P55010 431 aaKnown RBP7.41□□□□□ -1.22
CAPRIN1-208ENST00000530008 CAP1Q01518 475 aa7.41□□□□□ -1.22
CAPRIN1-208ENST00000530008 INSCQ1MX18 579 aa7.41□□□□□ -1.22
CAPRIN1-208ENST00000530008 MRNIPQ6NTE8 343 aa7.41□□□□□ -1.22
CAPRIN1-208ENST00000530008 FAM180BQ6P0A1 224 aa7.41□□□□□ -1.22
CAPRIN1-208ENST00000530008 C2CD5Q86YS7 1000 aa7.41□□□□□ -1.22
CAPRIN1-208ENST00000530008 CPOQ8IVL8 374 aa7.41□□□□□ -1.22
CAPRIN1-208ENST00000530008 HERC6Q8IVU3 1022 aa7.41□□□□□ -1.22
CAPRIN1-208ENST00000530008 CCDC117Q8IWD4 279 aaPredicted RBP7.41□□□□□ -1.22
CAPRIN1-208ENST00000530008 PDPRQ8NCN5 879 aa7.41□□□□□ -1.22
CAPRIN1-208ENST00000530008 SHCBP1Q8NEM2 672 aa7.41□□□□□ -1.22
CAPRIN1-208ENST00000530008 ADAMTS17Q8TE56 1095 aa7.41□□□□□ -1.22
CAPRIN1-208ENST00000530008 SMCR8Q8TEV9 937 aaPredicted RBP7.41□□□□□ -1.22
CAPRIN1-208ENST00000530008 TFAP2CQ92754 450 aa7.41□□□□□ -1.22
CAPRIN1-208ENST00000530008 LSM14BQ9BX40 385 aaKnown RBP7.41□□□□□ -1.22
CAPRIN1-208ENST00000530008 INO80BQ9C086 356 aaPredicted RBP7.41□□□□□ -1.22
CAPRIN1-208ENST00000530008 UBN1Q9NPG3 1134 aa7.41□□□□□ -1.22
CAPRIN1-208ENST00000530008 RASSF1Q9NS23 344 aa7.41□□□□□ -1.22
CAPRIN1-208ENST00000530008 DKK4Q9UBT3 224 aa7.41□□□□□ -1.22
CAPRIN1-208ENST00000530008 FBXO2Q9UK22 296 aaPredicted RBP7.41□□□□□ -1.22
CAPRIN1-208ENST00000530008 FEM1BQ9UK73 627 aa7.41□□□□□ -1.22
CAPRIN1-208ENST00000530008 SLC13A4Q9UKG4 626 aa7.41□□□□□ -1.22
CAPRIN1-208ENST00000530008 DTNAQ9Y4J8 743 aa7.41□□□□□ -1.22
CAPRIN1-208ENST00000530008 RPS6KL1Q9Y6S9 549 aa7.41□□□□□ -1.22
CAPRIN1-208ENST00000530008 A0A1W2PRX2 142 aa7.4□□□□□ -1.22
CAPRIN1-208ENST00000530008 ADAM23O75077 832 aa7.4□□□□□ -1.22
CAPRIN1-208ENST00000530008 USP1O94782 785 aa7.4□□□□□ -1.22
CAPRIN1-208ENST00000530008 ACTL6BO94805 426 aa7.4□□□□□ -1.22
CAPRIN1-208ENST00000530008 GLP2RO95838 553 aa7.4□□□□□ -1.22
CAPRIN1-208ENST00000530008 GYS1P13807 737 aa7.4□□□□□ -1.22
CAPRIN1-208ENST00000530008 PI3P19957 117 aa7.4□□□□□ -1.22
CAPRIN1-208ENST00000530008 PTDSS1P48651 473 aaKnown RBP7.4□□□□□ -1.22
CAPRIN1-208ENST00000530008 NSUN2Q08J23 767 aaKnown RBP eCLIP7.4□□□□□ -1.22
CAPRIN1-208ENST00000530008 EFR3AQ14156 821 aa7.4□□□□□ -1.22
CAPRIN1-208ENST00000530008 SSPNQ14714 243 aa7.4□□□□□ -1.22
CAPRIN1-208ENST00000530008 TRIM71Q2Q1W2 868 aaKnown RBP7.4□□□□□ -1.22
CAPRIN1-208ENST00000530008 L1TD1Q5T7N2 865 aaKnown RBP7.4□□□□□ -1.22
CAPRIN1-208ENST00000530008 FAXCQ5TGI0 409 aa7.4□□□□□ -1.22
CAPRIN1-208ENST00000530008 FAAH2Q6GMR7 532 aa7.4□□□□□ -1.22
CAPRIN1-208ENST00000530008 DOK3Q7L591 496 aa7.4□□□□□ -1.22
CAPRIN1-208ENST00000530008 GPRIN1Q7Z2K8 1008 aa7.4□□□□□ -1.22
CAPRIN1-208ENST00000530008 CARFQ8N187 725 aa7.4□□□□□ -1.22
CAPRIN1-208ENST00000530008 RNF169Q8NCN4 708 aa7.4□□□□□ -1.22
CAPRIN1-208ENST00000530008 LCORQ96JN0 433 aaPredicted RBP7.4□□□□□ -1.22
CAPRIN1-208ENST00000530008 DDX23Q9BUQ8 820 aaKnown RBP7.4□□□□□ -1.22
CAPRIN1-208ENST00000530008 PABPC3Q9H361 631 aaKnown RBP7.4□□□□□ -1.22
CAPRIN1-208ENST00000530008 AGO3Q9H9G7 860 aaKnown RBP7.4□□□□□ -1.22
CAPRIN1-208ENST00000530008 ZBTB26Q9HCK0 441 aa7.4□□□□□ -1.22
CAPRIN1-208ENST00000530008 SMC4Q9NTJ3 1288 aa7.4□□□□□ -1.22
CAPRIN1-208ENST00000530008 CA14Q9ULX7 337 aa7.4□□□□□ -1.22
CAPRIN1-208ENST00000530008 LAS1LQ9Y4W2 734 aaKnown RBP7.4□□□□□ -1.22
CAPRIN1-208ENST00000530008 PRSS47A8MTI9 375 aa7.39□□□□□ -1.23
CAPRIN1-208ENST00000530008 COQ9O75208 318 aa7.39□□□□□ -1.23
CAPRIN1-208ENST00000530008 VPS4BO75351 444 aa7.39□□□□□ -1.23
CAPRIN1-208ENST00000530008 RNASEH2AO75792 299 aaKnown RBP7.39□□□□□ -1.23
CAPRIN1-208ENST00000530008 SOAT2O75908 522 aa7.39□□□□□ -1.23
CAPRIN1-208ENST00000530008 ITGB1P05556 798 aa7.39□□□□□ -1.23
CAPRIN1-208ENST00000530008 XBP1P17861 261 aa7.39□□□□□ -1.23
CAPRIN1-208ENST00000530008 ELF1P32519 619 aa7.39□□□□□ -1.23
CAPRIN1-208ENST00000530008 PAPOLAP51003 745 aaKnown RBP7.39□□□□□ -1.23
CAPRIN1-208ENST00000530008 BOP1Q14137 746 aaKnown RBP7.39□□□□□ -1.23
CAPRIN1-208ENST00000530008 IQCB1Q15051 598 aa7.39□□□□□ -1.23
CAPRIN1-208ENST00000530008 CSRP2Q16527 193 aa7.39□□□□□ -1.23
CAPRIN1-208ENST00000530008 ARTNQ5T4W7 220 aa7.39□□□□□ -1.23
CAPRIN1-208ENST00000530008 SLC44A2Q8IWA5 706 aaPredicted RBP7.39□□□□□ -1.23
CAPRIN1-208ENST00000530008 KBTBD2Q8IY47 623 aa7.39□□□□□ -1.23
CAPRIN1-208ENST00000530008 THAP4Q8WY91 577 aa7.39□□□□□ -1.23
CAPRIN1-208ENST00000530008 HERVK_113Q902F9 699 aa7.39□□□□□ -1.23
CAPRIN1-208ENST00000530008 MAELQ96JY0 434 aaKnown RBP7.39□□□□□ -1.23
CAPRIN1-208ENST00000530008 ZNF512Q96ME7 567 aaPredicted RBP7.39□□□□□ -1.23
CAPRIN1-208ENST00000530008 SLC46A1Q96NT5 459 aa7.39□□□□□ -1.23
CAPRIN1-208ENST00000530008 RTKNQ9BST9 563 aa7.39□□□□□ -1.23
CAPRIN1-208ENST00000530008 TLR10Q9BXR5 811 aa7.39□□□□□ -1.23
CAPRIN1-208ENST00000530008 TTYH3Q9C0H2 523 aa7.39□□□□□ -1.23
CAPRIN1-208ENST00000530008 PRDM8Q9NQV8 689 aa7.39□□□□□ -1.23
CAPRIN1-208ENST00000530008 LPAR3Q9UBY5 353 aa7.39□□□□□ -1.23
CAPRIN1-208ENST00000530008 HDAC5Q9UQL6 1122 aa7.39□□□□□ -1.23
CAPRIN1-208ENST00000530008 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.39□□□□□ -1.23
CAPRIN1-208ENST00000530008 ITIH6Q6UXX5 1313 aa7.38□□□□□ -1.23
CAPRIN1-208ENST00000530008 A0A1B0GTL3 188 aa7.38□□□□□ -1.23
CAPRIN1-208ENST00000530008 AQP7P3A6NL99 342 aa7.38□□□□□ -1.23
CAPRIN1-208ENST00000530008 A6NLC8 198 aa7.38□□□□□ -1.23
CAPRIN1-208ENST00000530008 PRR5-ARHGAP8B1AHC4 643 aa7.38□□□□□ -1.23
CAPRIN1-208ENST00000530008 PCDH17O14917 1159 aa7.38□□□□□ -1.23
CAPRIN1-208ENST00000530008 DCLK1O15075 740 aa7.38□□□□□ -1.23
CAPRIN1-208ENST00000530008 HOXC11O43248 304 aaPredicted RBP7.38□□□□□ -1.23
CAPRIN1-208ENST00000530008 RRP9O43818 475 aaKnown RBP7.38□□□□□ -1.23
CAPRIN1-208ENST00000530008 MST1P26927 711 aa7.38□□□□□ -1.23
CAPRIN1-208ENST00000530008 KRT9P35527 623 aa7.38□□□□□ -1.23
CAPRIN1-208ENST00000530008 PRKAA2P54646 552 aa7.38□□□□□ -1.23
CAPRIN1-208ENST00000530008 AP2B1P63010 937 aa7.38□□□□□ -1.23
CAPRIN1-208ENST00000530008 CUL4BQ13620 913 aa7.38□□□□□ -1.23
CAPRIN1-208ENST00000530008 KCNAB1Q14722 419 aa7.38□□□□□ -1.23
CAPRIN1-208ENST00000530008 NOMO2Q5JPE7 1267 aa7.38□□□□□ -1.23
CAPRIN1-208ENST00000530008 VPS53Q5VIR6 699 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms