RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 DNAJC25Q9H1X3 360 aa13.55□□□□□ -0.24
CCDC90B-216ENST00000529856 SMYD3Q9H7B4 428 aa13.55□□□□□ -0.24
CCDC90B-216ENST00000529856 CRTAC1Q9NQ79 661 aa13.55□□□□□ -0.24
CCDC90B-216ENST00000529856 ABI2Q9NYB9 513 aaPredicted RBP13.55□□□□□ -0.24
CCDC90B-216ENST00000529856 EPS15L1Q9UBC2 864 aa13.55□□□□□ -0.24
CCDC90B-216ENST00000529856 ASB3Q9Y575 518 aa13.55□□□□□ -0.24
CCDC90B-216ENST00000529856 DOCK8Q8NF50 2099 aa13.54□□□□□ -0.24
CCDC90B-216ENST00000529856 A8MXQ7 604 aa13.54□□□□□ -0.24
CCDC90B-216ENST00000529856 LRRN2O75325 713 aa13.54□□□□□ -0.24
CCDC90B-216ENST00000529856 CLSTN1O94985 981 aa13.54□□□□□ -0.24
CCDC90B-216ENST00000529856 GNA14O95837 355 aa13.54□□□□□ -0.24
CCDC90B-216ENST00000529856 MBD3O95983 291 aa13.54□□□□□ -0.24
CCDC90B-216ENST00000529856 LAMP2P13473 410 aa13.54□□□□□ -0.24
CCDC90B-216ENST00000529856 ALADP13716 330 aa13.54□□□□□ -0.24
CCDC90B-216ENST00000529856 MXI1P50539 228 aa13.54□□□□□ -0.24
CCDC90B-216ENST00000529856 EPHA5P54756 1037 aa13.54□□□□□ -0.24
CCDC90B-216ENST00000529856 NLRP12P59046 1061 aa13.54□□□□□ -0.24
CCDC90B-216ENST00000529856 PSMC1P62191 440 aaKnown RBP13.54□□□□□ -0.24
CCDC90B-216ENST00000529856 MAPRE1Q15691 268 aaKnown RBP13.54□□□□□ -0.24
CCDC90B-216ENST00000529856 SLC5A9Q2M3M2 681 aa13.54□□□□□ -0.24
CCDC90B-216ENST00000529856 CFAP221Q4G0U5 840 aa13.54□□□□□ -0.24
CCDC90B-216ENST00000529856 CCDC40Q4G0X9 1142 aa13.54□□□□□ -0.24
CCDC90B-216ENST00000529856 CBWD6Q4V339 395 aa13.54□□□□□ -0.24
CCDC90B-216ENST00000529856 CBWD3Q5JTY5 395 aa13.54□□□□□ -0.24
CCDC90B-216ENST00000529856 CBWD5Q5RIA9 395 aa13.54□□□□□ -0.24
CCDC90B-216ENST00000529856 RBM43Q6ZSC3 357 aaKnown RBP13.54□□□□□ -0.24
CCDC90B-216ENST00000529856 HS6ST3Q8IZP7 471 aa13.54□□□□□ -0.24
CCDC90B-216ENST00000529856 FBXL13Q8NEE6 735 aa13.54□□□□□ -0.24
CCDC90B-216ENST00000529856 SEMA4DQ92854 862 aa13.54□□□□□ -0.24
CCDC90B-216ENST00000529856 FUBP3Q96I24 572 aaKnown RBP eCLIP13.54□□□□□ -0.24
CCDC90B-216ENST00000529856 MED15Q96RN5 788 aa13.54□□□□□ -0.24
CCDC90B-216ENST00000529856 SEPT5Q99719 369 aaPredicted RBP13.54□□□□□ -0.24
CCDC90B-216ENST00000529856 LRRC3Q9BY71 257 aa13.54□□□□□ -0.24
CCDC90B-216ENST00000529856 IMPG2Q9BZV3 1241 aa13.54□□□□□ -0.24
CCDC90B-216ENST00000529856 SDCBP2Q9H190 292 aa13.54□□□□□ -0.24
CCDC90B-216ENST00000529856 EPHX3Q9H6B9 360 aa13.54□□□□□ -0.24
CCDC90B-216ENST00000529856 APOBEC3GQ9HC16 384 aaKnown RBP13.54□□□□□ -0.24
CCDC90B-216ENST00000529856 ABCB6Q9NP58 842 aa13.54□□□□□ -0.24
CCDC90B-216ENST00000529856 RAB20Q9NX57 234 aa13.54□□□□□ -0.24
CCDC90B-216ENST00000529856 MUTYHQ9UIF7 546 aa13.54□□□□□ -0.24
CCDC90B-216ENST00000529856 CDH7Q9ULB5 785 aa13.54□□□□□ -0.24
CCDC90B-216ENST00000529856 COQ4Q9Y3A0 265 aa13.54□□□□□ -0.24
CCDC90B-216ENST00000529856 MRPS23Q9Y3D9 190 aaKnown RBP13.54□□□□□ -0.24
CCDC90B-216ENST00000529856 ZFP37Q9Y6Q3 630 aaPredicted RBP13.54□□□□□ -0.24
CCDC90B-216ENST00000529856 ZNF197O14709 1029 aa13.53□□□□□ -0.24
CCDC90B-216ENST00000529856 DCXO43602 365 aa13.53□□□□□ -0.24
CCDC90B-216ENST00000529856 MICAL2O94851 1124 aa13.53□□□□□ -0.24
CCDC90B-216ENST00000529856 FGFR1OPO95684 399 aaKnown RBP13.53□□□□□ -0.24
CCDC90B-216ENST00000529856 PTPN1P18031 435 aaKnown RBP13.53□□□□□ -0.24
CCDC90B-216ENST00000529856 ATF6P18850 670 aa13.53□□□□□ -0.24
CCDC90B-216ENST00000529856 CYP2F1P24903 491 aa13.53□□□□□ -0.24
CCDC90B-216ENST00000529856 ASPAP45381 313 aa13.53□□□□□ -0.24
CCDC90B-216ENST00000529856 RAP1GAPP47736 663 aa13.53□□□□□ -0.24
CCDC90B-216ENST00000529856 MARSP56192 900 aaKnown RBP13.53□□□□□ -0.24
CCDC90B-216ENST00000529856 NOP14P78316 857 aaKnown RBP13.53□□□□□ -0.24
CCDC90B-216ENST00000529856 CCDC142Q17RM4 750 aa13.53□□□□□ -0.24
CCDC90B-216ENST00000529856 DPCR1Q3MIW9 517 aa13.53□□□□□ -0.24
CCDC90B-216ENST00000529856 PRSS36Q5K4E3 855 aa13.53□□□□□ -0.24
CCDC90B-216ENST00000529856 CYP4A22Q5TCH4 519 aa13.53□□□□□ -0.24
CCDC90B-216ENST00000529856 SCARA5Q6ZMJ2 495 aa13.53□□□□□ -0.24
CCDC90B-216ENST00000529856 C4orf50Q6ZRC1 276 aa13.53□□□□□ -0.24
CCDC90B-216ENST00000529856 DNAJB7Q7Z6W7 309 aaPredicted RBP13.53□□□□□ -0.24
CCDC90B-216ENST00000529856 SPATA2LQ8IUW3 424 aaPredicted RBP13.53□□□□□ -0.24
CCDC90B-216ENST00000529856 LEMD2Q8NC56 503 aa13.53□□□□□ -0.24
CCDC90B-216ENST00000529856 CCDC150Q8NCX0 1101 aa13.53□□□□□ -0.24
CCDC90B-216ENST00000529856 MYCBPAPQ8TBZ2 947 aa13.53□□□□□ -0.24
CCDC90B-216ENST00000529856 FGF13Q92913 245 aa13.53□□□□□ -0.24
CCDC90B-216ENST00000529856 PSMG2Q969U7 264 aa13.53□□□□□ -0.24
CCDC90B-216ENST00000529856 BCO2Q9BYV7 579 aa13.53□□□□□ -0.24
CCDC90B-216ENST00000529856 DPEP3Q9H4B8 488 aa13.53□□□□□ -0.24
CCDC90B-216ENST00000529856 CYP3A43Q9HB55 503 aa13.53□□□□□ -0.24
CCDC90B-216ENST00000529856 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.53□□□□□ -0.24
CCDC90B-216ENST00000529856 ASAH2Q9NR71 780 aa13.53□□□□□ -0.24
CCDC90B-216ENST00000529856 MAGEC2Q9UBF1 373 aaPredicted RBP13.53□□□□□ -0.24
CCDC90B-216ENST00000529856 PMM2O15305 246 aa13.52□□□□□ -0.25
CCDC90B-216ENST00000529856 MOSPD3O75425 235 aa13.52□□□□□ -0.25
CCDC90B-216ENST00000529856 CCR2P41597 374 aa13.52□□□□□ -0.25
CCDC90B-216ENST00000529856 MAGEA11P43364 429 aa13.52□□□□□ -0.25
CCDC90B-216ENST00000529856 VEPH1Q14D04 833 aa13.52□□□□□ -0.25
CCDC90B-216ENST00000529856 PTPN21Q16825 1174 aa13.52□□□□□ -0.25
CCDC90B-216ENST00000529856 MDH1BQ5I0G3 518 aa13.52□□□□□ -0.25
CCDC90B-216ENST00000529856 PDZD4Q76G19 769 aaPredicted RBP13.52□□□□□ -0.25
CCDC90B-216ENST00000529856 ITIH5Q86UX2 942 aa13.52□□□□□ -0.25
CCDC90B-216ENST00000529856 UNC93AQ86WB7 457 aa13.52□□□□□ -0.25
CCDC90B-216ENST00000529856 TMC8Q8IU68 726 aa13.52□□□□□ -0.25
CCDC90B-216ENST00000529856 TRIM59Q8IWR1 403 aa13.52□□□□□ -0.25
CCDC90B-216ENST00000529856 B3GALNT2Q8NCR0 500 aa13.52□□□□□ -0.25
CCDC90B-216ENST00000529856 FAM200AQ8TCP9 573 aa13.52□□□□□ -0.25
CCDC90B-216ENST00000529856 NXPE3Q969Y0 559 aa13.52□□□□□ -0.25
CCDC90B-216ENST00000529856 MYLPFQ96A32 169 aa13.52□□□□□ -0.25
CCDC90B-216ENST00000529856 TCEAL4Q96EI5 215 aa13.52□□□□□ -0.25
CCDC90B-216ENST00000529856 PCED1BQ96HM7 432 aa13.52□□□□□ -0.25
CCDC90B-216ENST00000529856 FAXDC2Q96IV6 333 aa13.52□□□□□ -0.25
CCDC90B-216ENST00000529856 LPIN3Q9BQK8 851 aa13.52□□□□□ -0.25
CCDC90B-216ENST00000529856 NIF3L1Q9GZT8 377 aa13.52□□□□□ -0.25
CCDC90B-216ENST00000529856 KCNK12Q9HB15 430 aa13.52□□□□□ -0.25
CCDC90B-216ENST00000529856 IGSF9Q9P2J2 1179 aa13.52□□□□□ -0.25
CCDC90B-216ENST00000529856 DACH1Q9UI36 760 aa13.52□□□□□ -0.25
CCDC90B-216ENST00000529856 ANHXE9PGG2 379 aa13.51□□□□□ -0.25
CCDC90B-216ENST00000529856 NRG2O14511 850 aaPredicted RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 309.7 ms