RNA–Protein interactions for RNA: ENST00000529828.5

PTPRC-213, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 2,336 nt, Biotype non stop decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-213ENST00000529828 EFNA5P52803 228 aa3.83□□□□□ -1.8
PTPRC-213ENST00000529828 MLLT6P55198 1093 aaPredicted RBP3.83□□□□□ -1.8
PTPRC-213ENST00000529828 IRX4P78413 519 aa3.83□□□□□ -1.8
PTPRC-213ENST00000529828 RAD51AP2Q09MP3 1159 aa3.83□□□□□ -1.8
PTPRC-213ENST00000529828 RUNX3Q13761 415 aa3.83□□□□□ -1.8
PTPRC-213ENST00000529828 DMC1Q14565 340 aa3.83□□□□□ -1.8
PTPRC-213ENST00000529828 MGAT5BQ3V5L5 792 aa3.83□□□□□ -1.8
PTPRC-213ENST00000529828 SLC39A12Q504Y0 691 aa3.83□□□□□ -1.8
PTPRC-213ENST00000529828 ANO7Q6IWH7 933 aa3.83□□□□□ -1.8
PTPRC-213ENST00000529828 MPZL3Q6UWV2 235 aa3.83□□□□□ -1.8
PTPRC-213ENST00000529828 CYP2U1Q7Z449 544 aa3.83□□□□□ -1.8
PTPRC-213ENST00000529828 APBB1IPQ7Z5R6 666 aaPredicted RBP3.83□□□□□ -1.8
PTPRC-213ENST00000529828 USP37Q86T82 979 aa3.83□□□□□ -1.8
PTPRC-213ENST00000529828 MAB21L3Q8N8X9 362 aa3.83□□□□□ -1.8
PTPRC-213ENST00000529828 BEST2Q8NFU1 509 aa3.83□□□□□ -1.8
PTPRC-213ENST00000529828 OR10T2Q8NGX3 314 aa3.83□□□□□ -1.8
PTPRC-213ENST00000529828 PIGKQ92643 395 aa3.83□□□□□ -1.8
PTPRC-213ENST00000529828 EZH1Q92800 747 aaPredicted RBP3.83□□□□□ -1.8
PTPRC-213ENST00000529828 PSMG2Q969U7 264 aa3.83□□□□□ -1.8
PTPRC-213ENST00000529828 ZC3H10Q96K80 434 aaKnown RBP3.83□□□□□ -1.8
PTPRC-213ENST00000529828 GCNAQ96QF7 691 aa3.83□□□□□ -1.8
PTPRC-213ENST00000529828 PRR14Q9BWN1 585 aa3.83□□□□□ -1.8
PTPRC-213ENST00000529828 SLC46A2Q9BY10 475 aa3.83□□□□□ -1.8
PTPRC-213ENST00000529828 TASP1Q9H6P5 420 aa3.83□□□□□ -1.8
PTPRC-213ENST00000529828 BRMS1Q9HCU9 246 aa3.83□□□□□ -1.8
PTPRC-213ENST00000529828 PTPRHQ9HD43 1115 aa3.83□□□□□ -1.8
PTPRC-213ENST00000529828 TUFT1Q9NNX1 390 aa3.83□□□□□ -1.8
PTPRC-213ENST00000529828 ZDHHC4Q9NPG8 344 aa3.83□□□□□ -1.8
PTPRC-213ENST00000529828 THG1LQ9NWX6 298 aaKnown RBP3.83□□□□□ -1.8
PTPRC-213ENST00000529828 TPCN1Q9ULQ1 816 aa3.83□□□□□ -1.8
PTPRC-213ENST00000529828 TENM4Q6N022 2769 aa3.83□□□□□ -1.8
PTPRC-213ENST00000529828 APC2O95996 2303 aa3.83□□□□□ -1.8
PTPRC-213ENST00000529828 EML5Q05BV3 1969 aa3.83□□□□□ -1.8
PTPRC-213ENST00000529828 ABCA7Q8IZY2 2146 aa3.83□□□□□ -1.8
PTPRC-213ENST00000529828 CCDC163A0A0D9SF12 145 aa3.83□□□□□ -1.8
PTPRC-213ENST00000529828 TMEM8BA6NDV4 472 aa3.83□□□□□ -1.8
PTPRC-213ENST00000529828 M0QZQ0 153 aa3.83□□□□□ -1.8
PTPRC-213ENST00000529828 TAF4O00268 1085 aa3.83□□□□□ -1.8
PTPRC-213ENST00000529828 ATG13O75143 517 aa3.83□□□□□ -1.8
PTPRC-213ENST00000529828 HIP1RO75146 1068 aa3.83□□□□□ -1.8
PTPRC-213ENST00000529828 AKAP3O75969 853 aa3.83□□□□□ -1.8
PTPRC-213ENST00000529828 MCF2P10911 925 aa3.83□□□□□ -1.8
PTPRC-213ENST00000529828 XRCC6P12956 609 aaKnown RBP eCLIP3.83□□□□□ -1.8
PTPRC-213ENST00000529828 CEACAM1P13688 526 aa3.83□□□□□ -1.8
PTPRC-213ENST00000529828 CCT6AP40227 531 aaKnown RBP3.83□□□□□ -1.8
PTPRC-213ENST00000529828 TNFSF9P41273 254 aa3.83□□□□□ -1.8
PTPRC-213ENST00000529828 FAM193AP78312 1265 aa3.83□□□□□ -1.8
PTPRC-213ENST00000529828 SIM1P81133 766 aaPredicted RBP3.83□□□□□ -1.8
PTPRC-213ENST00000529828 BFSP1Q12934 665 aa3.83□□□□□ -1.8
PTPRC-213ENST00000529828 GPR17Q13304 367 aa3.83□□□□□ -1.8
PTPRC-213ENST00000529828 NBR1Q14596 966 aa3.83□□□□□ -1.8
PTPRC-213ENST00000529828 ZNF174Q15697 407 aa3.83□□□□□ -1.8
PTPRC-213ENST00000529828 TAF12Q16514 161 aa3.83□□□□□ -1.8
PTPRC-213ENST00000529828 SLC10A6Q3KNW5 377 aa3.83□□□□□ -1.8
PTPRC-213ENST00000529828 SDHAF4Q5VUM1 108 aa3.83□□□□□ -1.8
PTPRC-213ENST00000529828 PMS2CLQ68D20 193 aa3.83□□□□□ -1.8
PTPRC-213ENST00000529828 TXNDC8Q6A555 127 aa3.83□□□□□ -1.8
PTPRC-213ENST00000529828 OVOS1Q6IE37 1185 aa3.83□□□□□ -1.8
PTPRC-213ENST00000529828 CMTM8Q8IZV2 173 aa3.83□□□□□ -1.8
PTPRC-213ENST00000529828 FAM177A1Q8N128 213 aaPredicted RBP3.83□□□□□ -1.8
PTPRC-213ENST00000529828 DAW1Q8N136 415 aa3.83□□□□□ -1.8
PTPRC-213ENST00000529828 CHCHD4Q8N4Q1 142 aa3.83□□□□□ -1.8
PTPRC-213ENST00000529828 CCDC33Q8N5R6 958 aa3.83□□□□□ -1.8
PTPRC-213ENST00000529828 FRMD1Q8N878 549 aa3.83□□□□□ -1.8
PTPRC-213ENST00000529828 TSTD1Q8NFU3 115 aa3.83□□□□□ -1.8
PTPRC-213ENST00000529828 OR2I1PQ8NGU4 316 aa3.83□□□□□ -1.8
PTPRC-213ENST00000529828 RLN3Q8WXF3 142 aa3.83□□□□□ -1.8
PTPRC-213ENST00000529828 ZNF516Q92618 1163 aa3.83□□□□□ -1.8
PTPRC-213ENST00000529828 KIFAP3Q92845 792 aa3.83□□□□□ -1.8
PTPRC-213ENST00000529828 USP13Q92995 863 aaPredicted RBP3.83□□□□□ -1.8
PTPRC-213ENST00000529828 P2RY13Q9BPV8 354 aa3.83□□□□□ -1.8
PTPRC-213ENST00000529828 FAM83CQ9BQN1 747 aa3.83□□□□□ -1.8
PTPRC-213ENST00000529828 RUSC1Q9BVN2 902 aa3.83□□□□□ -1.8
PTPRC-213ENST00000529828 TRPC7Q9HCX4 862 aa3.83□□□□□ -1.8
PTPRC-213ENST00000529828 KMT5AQ9NQR1 393 aa3.83□□□□□ -1.8
PTPRC-213ENST00000529828 DDX19AQ9NUU7 478 aaKnown RBP3.83□□□□□ -1.8
PTPRC-213ENST00000529828 MAGED2Q9UNF1 606 aaPredicted RBP3.83□□□□□ -1.8
PTPRC-213ENST00000529828 KIAA1024Q9UPX6 916 aa3.83□□□□□ -1.8
PTPRC-213ENST00000529828 WNT6Q9Y6F9 365 aa3.83□□□□□ -1.8
PTPRC-213ENST00000529828 GON4LQ3T8J9 2241 aa3.83□□□□□ -1.8
PTPRC-213ENST00000529828 ASCC3Q8N3C0 2202 aaKnown RBP3.83□□□□□ -1.8
PTPRC-213ENST00000529828 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.82□□□□□ -1.8
PTPRC-213ENST00000529828 OR6C75A6NL08 312 aa3.82□□□□□ -1.8
PTPRC-213ENST00000529828 PP2D1A8MPX8 630 aa3.82□□□□□ -1.8
PTPRC-213ENST00000529828 E9PMD0 336 aa3.82□□□□□ -1.8
PTPRC-213ENST00000529828 TRDMT1O14717 391 aaKnown RBP3.82□□□□□ -1.8
PTPRC-213ENST00000529828 SCAMP3O14828 347 aaKnown RBP3.82□□□□□ -1.8
PTPRC-213ENST00000529828 PFKFB2O60825 505 aa3.82□□□□□ -1.8
PTPRC-213ENST00000529828 OAZ2O95190 189 aa3.82□□□□□ -1.8
PTPRC-213ENST00000529828 OR52Z1P0C646 297 aa3.82□□□□□ -1.8
PTPRC-213ENST00000529828 CSRP1P21291 193 aaKnown RBP3.82□□□□□ -1.8
PTPRC-213ENST00000529828 PROZP22891 400 aa3.82□□□□□ -1.8
PTPRC-213ENST00000529828 RPA1P27694 616 aa3.82□□□□□ -1.8
PTPRC-213ENST00000529828 CDC25CP30307 473 aa3.82□□□□□ -1.8
PTPRC-213ENST00000529828 GJA4P35212 333 aa3.82□□□□□ -1.8
PTPRC-213ENST00000529828 AVPR1AP37288 418 aa3.82□□□□□ -1.8
PTPRC-213ENST00000529828 PTGER3P43115 390 aa3.82□□□□□ -1.8
PTPRC-213ENST00000529828 DMP1Q13316 513 aaPredicted RBP3.82□□□□□ -1.8
PTPRC-213ENST00000529828 NOLC1Q14978 699 aaKnown RBP eCLIP3.82□□□□□ -1.8
PTPRC-213ENST00000529828 VEPH1Q14D04 833 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms