RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 SF3B3Q15393 1217 aaKnown RBP5.64□□□□□ -1.51
C11orf88-204ENST00000529661 SP5Q6BEB4 398 aaPredicted RBP5.64□□□□□ -1.51
C11orf88-204ENST00000529661 TSHZ1Q6ZSZ6 1077 aa5.64□□□□□ -1.51
C11orf88-204ENST00000529661 DPP9Q86TI2 863 aa5.64□□□□□ -1.51
C11orf88-204ENST00000529661 PDSS2Q86YH6 399 aa5.64□□□□□ -1.51
C11orf88-204ENST00000529661 IL31RAQ8NI17 732 aa5.64□□□□□ -1.51
C11orf88-204ENST00000529661 SCAMP4Q969E2 229 aa5.64□□□□□ -1.51
C11orf88-204ENST00000529661 MTFMTQ96DP5 389 aaKnown RBP5.64□□□□□ -1.51
C11orf88-204ENST00000529661 CCDC138Q96M89 665 aa5.64□□□□□ -1.51
C11orf88-204ENST00000529661 TRIB1Q96RU8 372 aa5.64□□□□□ -1.51
C11orf88-204ENST00000529661 CRAMP1Q96RY5 1269 aa5.64□□□□□ -1.51
C11orf88-204ENST00000529661 SMOQ99835 787 aa5.64□□□□□ -1.51
C11orf88-204ENST00000529661 VKORC1Q9BQB6 163 aa5.64□□□□□ -1.51
C11orf88-204ENST00000529661 BTBD1Q9H0C5 482 aa5.64□□□□□ -1.51
C11orf88-204ENST00000529661 WDCPQ9H6R7 721 aa5.64□□□□□ -1.51
C11orf88-204ENST00000529661 RSAD1Q9HA92 442 aa5.64□□□□□ -1.51
C11orf88-204ENST00000529661 INTS13Q9NVM9 706 aa5.64□□□□□ -1.51
C11orf88-204ENST00000529661 KCTD5Q9NXV2 234 aa5.64□□□□□ -1.51
C11orf88-204ENST00000529661 LRIT1Q9P2V4 623 aa5.64□□□□□ -1.51
C11orf88-204ENST00000529661 NEU2Q9Y3R4 380 aa5.64□□□□□ -1.51
C11orf88-204ENST00000529661 SALL3Q9BXA9 1300 aa5.64□□□□□ -1.51
C11orf88-204ENST00000529661 ISM1B1AKI9 464 aa5.63□□□□□ -1.51
C11orf88-204ENST00000529661 MYO1FO00160 1098 aa5.63□□□□□ -1.51
C11orf88-204ENST00000529661 POLRMTO00411 1230 aaKnown RBP5.63□□□□□ -1.51
C11orf88-204ENST00000529661 SUN1O94901 812 aa5.63□□□□□ -1.51
C11orf88-204ENST00000529661 ADRA1BP35368 520 aa5.63□□□□□ -1.51
C11orf88-204ENST00000529661 ANXA11P50995 505 aaKnown RBP5.63□□□□□ -1.51
C11orf88-204ENST00000529661 MRPS35P82673 323 aaKnown RBP5.63□□□□□ -1.51
C11orf88-204ENST00000529661 LONRF1Q17RB8 773 aa5.63□□□□□ -1.51
C11orf88-204ENST00000529661 SLC30A10Q6XR72 485 aa5.63□□□□□ -1.51
C11orf88-204ENST00000529661 FAM90A1Q86YD7 464 aa5.63□□□□□ -1.51
C11orf88-204ENST00000529661 ADGRG5Q8IZF4 528 aa5.63□□□□□ -1.51
C11orf88-204ENST00000529661 LNX2Q8N448 690 aa5.63□□□□□ -1.51
C11orf88-204ENST00000529661 SNX19Q92543 992 aa5.63□□□□□ -1.51
C11orf88-204ENST00000529661 LRRC27Q9C0I9 530 aa5.63□□□□□ -1.51
C11orf88-204ENST00000529661 MRPL46Q9H2W6 279 aaKnown RBP5.63□□□□□ -1.51
C11orf88-204ENST00000529661 RLIMQ9NVW2 624 aa5.63□□□□□ -1.51
C11orf88-204ENST00000529661 PCDHA1Q9Y5I3 950 aa5.63□□□□□ -1.51
C11orf88-204ENST00000529661 ZAR1LA6NP61 321 aa5.62□□□□□ -1.51
C11orf88-204ENST00000529661 PEX1O43933 1283 aa5.62□□□□□ -1.51
C11orf88-204ENST00000529661 SETSIPP0DME0 302 aa5.62□□□□□ -1.51
C11orf88-204ENST00000529661 RARBP10826 455 aa5.62□□□□□ -1.51
C11orf88-204ENST00000529661 GATA3P23771 443 aa5.62□□□□□ -1.51
C11orf88-204ENST00000529661 PRIM2P49643 509 aa5.62□□□□□ -1.51
C11orf88-204ENST00000529661 CASP5P51878 434 aa5.62□□□□□ -1.51
C11orf88-204ENST00000529661 POU6F2P78424 691 aaPredicted RBP5.62□□□□□ -1.51
C11orf88-204ENST00000529661 FMO1Q01740 532 aa5.62□□□□□ -1.51
C11orf88-204ENST00000529661 DYRK1AQ13627 763 aa5.62□□□□□ -1.51
C11orf88-204ENST00000529661 STRIP1Q5VSL9 837 aa5.62□□□□□ -1.51
C11orf88-204ENST00000529661 PPP1R3BQ86XI6 285 aa5.62□□□□□ -1.51
C11orf88-204ENST00000529661 TOR1AIP2Q8NFQ8 470 aa5.62□□□□□ -1.51
C11orf88-204ENST00000529661 SLC30A5Q8TAD4 765 aa5.62□□□□□ -1.51
C11orf88-204ENST00000529661 ACTRT2Q8TDY3 377 aa5.62□□□□□ -1.51
C11orf88-204ENST00000529661 LRIG1Q96JA1 1093 aa5.62□□□□□ -1.51
C11orf88-204ENST00000529661 MRGPRX1Q96LB2 322 aa5.62□□□□□ -1.51
C11orf88-204ENST00000529661 SGCZQ96LD1 299 aa5.62□□□□□ -1.51
C11orf88-204ENST00000529661 SYNPO2LQ9H987 977 aa5.62□□□□□ -1.51
C11orf88-204ENST00000529661 KIAA1586Q9HCI6 787 aa5.62□□□□□ -1.51
C11orf88-204ENST00000529661 PLCB1Q9NQ66 1216 aa5.62□□□□□ -1.51
C11orf88-204ENST00000529661 USP19O94966 1318 aa5.62□□□□□ -1.51
C11orf88-204ENST00000529661 A0A1W2PPL8 197 aa5.61□□□□□ -1.51
C11orf88-204ENST00000529661 PRSS29PA6NIE9 313 aa5.61□□□□□ -1.51
C11orf88-204ENST00000529661 RHPN2P1A8MT19 583 aa5.61□□□□□ -1.51
C11orf88-204ENST00000529661 YY2O15391 372 aa5.61□□□□□ -1.51
C11orf88-204ENST00000529661 VPS4BO75351 444 aa5.61□□□□□ -1.51
C11orf88-204ENST00000529661 MATN4O95460 622 aa5.61□□□□□ -1.51
C11orf88-204ENST00000529661 AHSGP02765 367 aa5.61□□□□□ -1.51
C11orf88-204ENST00000529661 GNAI2P04899 355 aa5.61□□□□□ -1.51
C11orf88-204ENST00000529661 CHRM3P20309 590 aa5.61□□□□□ -1.51
C11orf88-204ENST00000529661 ARFIP2P53365 341 aa5.61□□□□□ -1.51
C11orf88-204ENST00000529661 HABP2Q14520 560 aaPredicted RBP5.61□□□□□ -1.51
C11orf88-204ENST00000529661 KRT72Q14CN4 511 aa5.61□□□□□ -1.51
C11orf88-204ENST00000529661 CNGA2Q16280 664 aa5.61□□□□□ -1.51
C11orf88-204ENST00000529661 KHDC1LQ5JSQ8 128 aa5.61□□□□□ -1.51
C11orf88-204ENST00000529661 FAM83BQ5T0W9 1011 aa5.61□□□□□ -1.51
C11orf88-204ENST00000529661 EMC10Q5UCC4 262 aa5.61□□□□□ -1.51
C11orf88-204ENST00000529661 ENAHQ8N8S7 591 aaPredicted RBP5.61□□□□□ -1.51
C11orf88-204ENST00000529661 PCSK9Q8NBP7 692 aaKnown RBP5.61□□□□□ -1.51
C11orf88-204ENST00000529661 LPIN2Q92539 896 aa5.61□□□□□ -1.51
C11orf88-204ENST00000529661 SLC9A6Q92581 669 aa5.61□□□□□ -1.51
C11orf88-204ENST00000529661 FBXL20Q96IG2 436 aa5.61□□□□□ -1.51
C11orf88-204ENST00000529661 CNPPD1Q9BV87 410 aa5.61□□□□□ -1.51
C11orf88-204ENST00000529661 TINAGL1Q9GZM7 467 aaPredicted RBP5.61□□□□□ -1.51
C11orf88-204ENST00000529661 GPR35Q9HC97 309 aa5.61□□□□□ -1.51
C11orf88-204ENST00000529661 SARS2Q9NP81 518 aaKnown RBP5.61□□□□□ -1.51
C11orf88-204ENST00000529661 MRPS18AQ9NVS2 196 aaKnown RBP5.61□□□□□ -1.51
C11orf88-204ENST00000529661 STAP2Q9UGK3 403 aa5.61□□□□□ -1.51
C11orf88-204ENST00000529661 PCDHA6Q9UN73 950 aa5.61□□□□□ -1.51
C11orf88-204ENST00000529661 ABHD14A-ACY1A0A1B0GW23 586 aa5.6□□□□□ -1.51
C11orf88-204ENST00000529661 RASA4BC9J798 803 aa5.6□□□□□ -1.51
C11orf88-204ENST00000529661 FOXN3O00409 490 aaPredicted RBP5.6□□□□□ -1.51
C11orf88-204ENST00000529661 RASA4O43374 803 aa5.6□□□□□ -1.51
C11orf88-204ENST00000529661 KIF20AO95235 890 aa5.6□□□□□ -1.51
C11orf88-204ENST00000529661 CHEK2O96017 543 aa5.6□□□□□ -1.51
C11orf88-204ENST00000529661 KITP10721 976 aa5.6□□□□□ -1.51
C11orf88-204ENST00000529661 NPR1P16066 1061 aa5.6□□□□□ -1.51
C11orf88-204ENST00000529661 NPTX2P47972 431 aa5.6□□□□□ -1.51
C11orf88-204ENST00000529661 CLK3P49761 638 aaKnown RBP5.6□□□□□ -1.51
C11orf88-204ENST00000529661 EXOSC9Q06265 439 aaKnown RBP5.6□□□□□ -1.51
C11orf88-204ENST00000529661 ZNF543Q08ER8 600 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms