RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 SMAPO00193 183 aa9.74□□□□□ -0.85
VPS11-203ENST00000529545 GIPC1O14908 333 aa9.74□□□□□ -0.85
VPS11-203ENST00000529545 MEFVO15553 781 aaPredicted RBP9.74□□□□□ -0.85
VPS11-203ENST00000529545 JAK2O60674 1132 aa9.74□□□□□ -0.85
VPS11-203ENST00000529545 LARGE1O95461 756 aa9.74□□□□□ -0.85
VPS11-203ENST00000529545 EGFP01133 1207 aa9.74□□□□□ -0.85
VPS11-203ENST00000529545 CEACAM1P13688 526 aa9.74□□□□□ -0.85
VPS11-203ENST00000529545 CSRP1P21291 193 aaKnown RBP9.74□□□□□ -0.85
VPS11-203ENST00000529545 TRAPPC10P48553 1259 aa9.74□□□□□ -0.85
VPS11-203ENST00000529545 GALK1P51570 392 aa9.74□□□□□ -0.85
VPS11-203ENST00000529545 ANAPC15P60006 121 aa9.74□□□□□ -0.85
VPS11-203ENST00000529545 GUCY1B3Q02153 619 aa9.74□□□□□ -0.85
VPS11-203ENST00000529545 MCL1Q07820 350 aa9.74□□□□□ -0.85
VPS11-203ENST00000529545 SMARCB1Q12824 385 aa9.74□□□□□ -0.85
VPS11-203ENST00000529545 PSMD2Q13200 908 aa9.74□□□□□ -0.85
VPS11-203ENST00000529545 PDGFRLQ15198 375 aa9.74□□□□□ -0.85
VPS11-203ENST00000529545 ZBTB6Q15916 424 aa9.74□□□□□ -0.85
VPS11-203ENST00000529545 SLC39A12Q504Y0 691 aa9.74□□□□□ -0.85
VPS11-203ENST00000529545 USP39Q53GS9 565 aaKnown RBP9.74□□□□□ -0.85
VPS11-203ENST00000529545 SH3PXD2AQ5TCZ1 1133 aa9.74□□□□□ -0.85
VPS11-203ENST00000529545 RINT1Q6NUQ1 792 aa9.74□□□□□ -0.85
VPS11-203ENST00000529545 SYT13Q7L8C5 426 aa9.74□□□□□ -0.85
VPS11-203ENST00000529545 METTL23Q86XA0 190 aa9.74□□□□□ -0.85
VPS11-203ENST00000529545 DAW1Q8N136 415 aa9.74□□□□□ -0.85
VPS11-203ENST00000529545 THEM5Q8N1Q8 247 aa9.74□□□□□ -0.85
VPS11-203ENST00000529545 CPA6Q8N4T0 437 aa9.74□□□□□ -0.85
VPS11-203ENST00000529545 MAB21L3Q8N8X9 362 aa9.74□□□□□ -0.85
VPS11-203ENST00000529545 C2orf15Q8WU43 125 aaKnown RBP9.74□□□□□ -0.85
VPS11-203ENST00000529545 C8orf76Q96K31 380 aa9.74□□□□□ -0.85
VPS11-203ENST00000529545 SENP8Q96LD8 212 aa9.74□□□□□ -0.85
VPS11-203ENST00000529545 P2RY13Q9BPV8 354 aa9.74□□□□□ -0.85
VPS11-203ENST00000529545 LPIN3Q9BQK8 851 aa9.74□□□□□ -0.85
VPS11-203ENST00000529545 RUSC1Q9BVN2 902 aa9.74□□□□□ -0.85
VPS11-203ENST00000529545 SLC46A2Q9BY10 475 aa9.74□□□□□ -0.85
VPS11-203ENST00000529545 SMG9Q9H0W8 520 aaKnown RBP9.74□□□□□ -0.85
VPS11-203ENST00000529545 FOXP1Q9H334 677 aaPredicted RBP9.74□□□□□ -0.85
VPS11-203ENST00000529545 RPF1Q9H9Y2 349 aaKnown RBP9.74□□□□□ -0.85
VPS11-203ENST00000529545 TMEM9BQ9NQ34 198 aa9.74□□□□□ -0.85
VPS11-203ENST00000529545 EBF1Q9UH73 591 aa9.74□□□□□ -0.85
VPS11-203ENST00000529545 DSEQ9UL01 958 aa9.74□□□□□ -0.85
VPS11-203ENST00000529545 ATG2BQ96BY7 2078 aa9.74□□□□□ -0.85
VPS11-203ENST00000529545 MYH11P35749 1972 aa9.74□□□□□ -0.85
VPS11-203ENST00000529545 LNP1A1A4G5 178 aa9.73□□□□□ -0.85
VPS11-203ENST00000529545 SOBPA7XYQ1 873 aa9.73□□□□□ -0.85
VPS11-203ENST00000529545 LACTBL1A8MY62 500 aa9.73□□□□□ -0.85
VPS11-203ENST00000529545 MAPTP10636 758 aaKnown RBP9.73□□□□□ -0.85
VPS11-203ENST00000529545 PLS3P13797 630 aa9.73□□□□□ -0.85
VPS11-203ENST00000529545 GUCY2CP25092 1073 aa9.73□□□□□ -0.85
VPS11-203ENST00000529545 LIG4P49917 911 aa9.73□□□□□ -0.85
VPS11-203ENST00000529545 DGKEP52429 567 aa9.73□□□□□ -0.85
VPS11-203ENST00000529545 LILRA4P59901 499 aa9.73□□□□□ -0.85
VPS11-203ENST00000529545 NR1H3Q13133 447 aa9.73□□□□□ -0.85
VPS11-203ENST00000529545 MAPK7Q13164 816 aa9.73□□□□□ -0.85
VPS11-203ENST00000529545 DMC1Q14565 340 aa9.73□□□□□ -0.85
VPS11-203ENST00000529545 TRIM68Q6AZZ1 485 aa9.73□□□□□ -0.85
VPS11-203ENST00000529545 C1orf186Q6ZWK4 172 aa9.73□□□□□ -0.85
VPS11-203ENST00000529545 CD302Q8IX05 232 aa9.73□□□□□ -0.85
VPS11-203ENST00000529545 TTC9BQ8N6N2 239 aa9.73□□□□□ -0.85
VPS11-203ENST00000529545 TMEM161BQ8NDZ6 487 aa9.73□□□□□ -0.85
VPS11-203ENST00000529545 TSTD1Q8NFU3 115 aa9.73□□□□□ -0.85
VPS11-203ENST00000529545 RPLP0P6Q8NHW5 317 aa9.73□□□□□ -0.85
VPS11-203ENST00000529545 SPPL2BQ8TCT7 592 aa9.73□□□□□ -0.85
VPS11-203ENST00000529545 GIPC2Q8TF65 315 aa9.73□□□□□ -0.85
VPS11-203ENST00000529545 MRPS31Q92665 395 aaKnown RBP9.73□□□□□ -0.85
VPS11-203ENST00000529545 IL21Q9HBE4 155 aa9.73□□□□□ -0.85
VPS11-203ENST00000529545 HPS4Q9NQG7 708 aa9.73□□□□□ -0.85
VPS11-203ENST00000529545 TDP1Q9NUW8 608 aa9.73□□□□□ -0.85
VPS11-203ENST00000529545 ZFHX4Q86UP3 3567 aa9.73□□□□□ -0.85
VPS11-203ENST00000529545 DCLK1O15075 740 aa9.72□□□□□ -0.85
VPS11-203ENST00000529545 OGTO15294 1046 aa9.72□□□□□ -0.85
VPS11-203ENST00000529545 ARSAP15289 507 aa9.72□□□□□ -0.85
VPS11-203ENST00000529545 ATF6P18850 670 aa9.72□□□□□ -0.85
VPS11-203ENST00000529545 SPINK2P20155 84 aa9.72□□□□□ -0.85
VPS11-203ENST00000529545 GJA4P35212 333 aa9.72□□□□□ -0.85
VPS11-203ENST00000529545 RDXP35241 583 aaKnown RBP9.72□□□□□ -0.85
VPS11-203ENST00000529545 GUCY2FP51841 1108 aa9.72□□□□□ -0.85
VPS11-203ENST00000529545 NLRP12P59046 1061 aa9.72□□□□□ -0.85
VPS11-203ENST00000529545 RAD51AP2Q09MP3 1159 aa9.72□□□□□ -0.85
VPS11-203ENST00000529545 ZRSR1Q15695 479 aaKnown RBP9.72□□□□□ -0.85
VPS11-203ENST00000529545 UAP1L1Q3KQV9 507 aa9.72□□□□□ -0.85
VPS11-203ENST00000529545 SPATA1Q5VX52 437 aa9.72□□□□□ -0.85
VPS11-203ENST00000529545 CYP2U1Q7Z449 544 aa9.72□□□□□ -0.85
VPS11-203ENST00000529545 DCP1BQ8IZD4 617 aaKnown RBP9.72□□□□□ -0.85
VPS11-203ENST00000529545 IGSF22Q8N9C0 903 aa9.72□□□□□ -0.85
VPS11-203ENST00000529545 USP13Q92995 863 aaPredicted RBP9.72□□□□□ -0.85
VPS11-203ENST00000529545 CD101Q93033 1021 aa9.72□□□□□ -0.85
VPS11-203ENST00000529545 SCNM1Q9BWG6 230 aa9.72□□□□□ -0.85
VPS11-203ENST00000529545 ZCWPW1Q9H0M4 648 aa9.72□□□□□ -0.85
VPS11-203ENST00000529545 SLC32A1Q9H598 525 aa9.72□□□□□ -0.85
VPS11-203ENST00000529545 ABI2Q9NYB9 513 aaPredicted RBP9.72□□□□□ -0.85
VPS11-203ENST00000529545 LARSQ9P2J5 1176 aaKnown RBP9.72□□□□□ -0.85
VPS11-203ENST00000529545 CCL26Q9Y258 94 aa9.72□□□□□ -0.85
VPS11-203ENST00000529545 NUP205Q92621 2012 aa9.72□□□□□ -0.85
VPS11-203ENST00000529545 OTOL1A6NHN0 477 aaPredicted RBP9.71□□□□□ -0.86
VPS11-203ENST00000529545 SRRM3A6NNA2 597 aaPredicted RBP9.71□□□□□ -0.86
VPS11-203ENST00000529545 LAD1O00515 517 aa9.71□□□□□ -0.86
VPS11-203ENST00000529545 CYB561D2O14569 222 aa9.71□□□□□ -0.86
VPS11-203ENST00000529545 HNRNPDLO14979 420 aaKnown RBP9.71□□□□□ -0.86
VPS11-203ENST00000529545 CYP11A1P05108 521 aa9.71□□□□□ -0.86
VPS11-203ENST00000529545 CSH1P0DML2 217 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms