RNA–Protein interactions for RNA: ENST00000529216.1

PABPC4-223, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 5

Gene PABPC4, Length 317 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-223ENST00000529216 CCDC170Q8IYT3 715 aa8.71□□□□□ -1.02
PABPC4-223ENST00000529216 DCP1BQ8IZD4 617 aaKnown RBP8.71□□□□□ -1.02
PABPC4-223ENST00000529216 VPS52Q8N1B4 723 aa8.71□□□□□ -1.02
PABPC4-223ENST00000529216 FBXO22Q8NEZ5 403 aa8.71□□□□□ -1.02
PABPC4-223ENST00000529216 OLIG1Q8TAK6 271 aa8.71□□□□□ -1.02
PABPC4-223ENST00000529216 LNX1Q8TBB1 728 aaPredicted RBP8.71□□□□□ -1.02
PABPC4-223ENST00000529216 MYCBPAPQ8TBZ2 947 aa8.71□□□□□ -1.02
PABPC4-223ENST00000529216 SLC20A1Q8WUM9 679 aa8.71□□□□□ -1.02
PABPC4-223ENST00000529216 ZNF606Q8WXB4 792 aa8.71□□□□□ -1.02
PABPC4-223ENST00000529216 RIN2Q8WYP3 895 aaPredicted RBP8.71□□□□□ -1.02
PABPC4-223ENST00000529216 TFAP2BQ92481 460 aa8.71□□□□□ -1.02
PABPC4-223ENST00000529216 B3GALT6Q96L58 329 aa8.71□□□□□ -1.02
PABPC4-223ENST00000529216 CCDC42Q96M95 316 aa8.71□□□□□ -1.02
PABPC4-223ENST00000529216 HEXIM2Q96MH2 286 aaKnown RBP8.71□□□□□ -1.02
PABPC4-223ENST00000529216 AGPAT1Q99943 283 aa8.71□□□□□ -1.02
PABPC4-223ENST00000529216 ZSWIM1Q9BR11 485 aa8.71□□□□□ -1.02
PABPC4-223ENST00000529216 ZCWPW1Q9H0M4 648 aa8.71□□□□□ -1.02
PABPC4-223ENST00000529216 NKX2-4Q9H2Z4 354 aa8.71□□□□□ -1.02
PABPC4-223ENST00000529216 NHEJ1Q9H9Q4 299 aaPredicted RBP8.71□□□□□ -1.02
PABPC4-223ENST00000529216 ACP6Q9NPH0 428 aa8.71□□□□□ -1.02
PABPC4-223ENST00000529216 CRTAC1Q9NQ79 661 aa8.71□□□□□ -1.02
PABPC4-223ENST00000529216 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.71□□□□□ -1.02
PABPC4-223ENST00000529216 MRPL17Q9NRX2 175 aaKnown RBP8.71□□□□□ -1.02
PABPC4-223ENST00000529216 PCDHGC3Q9UN70 934 aa8.71□□□□□ -1.02
PABPC4-223ENST00000529216 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.71□□□□□ -1.02
PABPC4-223ENST00000529216 TSC2P49815 1807 aa8.7□□□□□ -1.02
PABPC4-223ENST00000529216 SOWAHDA6NJG2 315 aa8.7□□□□□ -1.02
PABPC4-223ENST00000529216 H3BNC9 293 aa8.7□□□□□ -1.02
PABPC4-223ENST00000529216 ARHGAP6O43182 974 aa8.7□□□□□ -1.02
PABPC4-223ENST00000529216 ATP2C2O75185 946 aa8.7□□□□□ -1.02
PABPC4-223ENST00000529216 MMEP08473 750 aa8.7□□□□□ -1.02
PABPC4-223ENST00000529216 PLEKP08567 350 aaPredicted RBP8.7□□□□□ -1.02
PABPC4-223ENST00000529216 CHRNB2P17787 502 aa8.7□□□□□ -1.02
PABPC4-223ENST00000529216 CYLC1P35663 651 aaPredicted RBP8.7□□□□□ -1.02
PABPC4-223ENST00000529216 EIF4A3P38919 411 aaKnown RBP8.7□□□□□ -1.02
PABPC4-223ENST00000529216 KIF11P52732 1056 aa8.7□□□□□ -1.02
PABPC4-223ENST00000529216 FMO1Q01740 532 aa8.7□□□□□ -1.02
PABPC4-223ENST00000529216 SMARCB1Q12824 385 aa8.7□□□□□ -1.02
PABPC4-223ENST00000529216 PTPN14Q15678 1187 aa8.7□□□□□ -1.02
PABPC4-223ENST00000529216 CNGA2Q16280 664 aa8.7□□□□□ -1.02
PABPC4-223ENST00000529216 NFE2Q16621 373 aaPredicted RBP8.7□□□□□ -1.02
PABPC4-223ENST00000529216 ASTE1Q2TB18 679 aaPredicted RBP8.7□□□□□ -1.02
PABPC4-223ENST00000529216 LRIT3Q3SXY7 679 aa8.7□□□□□ -1.02
PABPC4-223ENST00000529216 CFAP221Q4G0U5 840 aa8.7□□□□□ -1.02
PABPC4-223ENST00000529216 HS1BP3Q53T59 392 aa8.7□□□□□ -1.02
PABPC4-223ENST00000529216 MDH1BQ5I0G3 518 aa8.7□□□□□ -1.02
PABPC4-223ENST00000529216 PPP1R2P3Q6NXS1 205 aa8.7□□□□□ -1.02
PABPC4-223ENST00000529216 PRSS55Q6UWB4 352 aaPredicted RBP8.7□□□□□ -1.02
PABPC4-223ENST00000529216 LCLAT1Q6UWP7 414 aa8.7□□□□□ -1.02
PABPC4-223ENST00000529216 C4orf50Q6ZRC1 276 aa8.7□□□□□ -1.02
PABPC4-223ENST00000529216 GLYCTKQ8IVS8 523 aa8.7□□□□□ -1.02
PABPC4-223ENST00000529216 C12orf29Q8N999 325 aa8.7□□□□□ -1.02
PABPC4-223ENST00000529216 SPPL3Q8TCT6 385 aa8.7□□□□□ -1.02
PABPC4-223ENST00000529216 C2orf15Q8WU43 125 aaKnown RBP8.7□□□□□ -1.02
PABPC4-223ENST00000529216 MYLPFQ96A32 169 aa8.7□□□□□ -1.02
PABPC4-223ENST00000529216 CYFIP2Q96F07 1278 aa8.7□□□□□ -1.02
PABPC4-223ENST00000529216 FUBP3Q96I24 572 aaKnown RBP eCLIP8.7□□□□□ -1.02
PABPC4-223ENST00000529216 CHP1Q99653 195 aa8.7□□□□□ -1.02
PABPC4-223ENST00000529216 HNRNPABQ99729 332 aaKnown RBP8.7□□□□□ -1.02
PABPC4-223ENST00000529216 LMAN2LQ9H0V9 348 aa8.7□□□□□ -1.02
PABPC4-223ENST00000529216 LHX5Q9H2C1 402 aa8.7□□□□□ -1.02
PABPC4-223ENST00000529216 KCNF1Q9H3M0 494 aa8.7□□□□□ -1.02
PABPC4-223ENST00000529216 DEF6Q9H4E7 631 aa8.7□□□□□ -1.02
PABPC4-223ENST00000529216 SLC28A3Q9HAS3 691 aa8.7□□□□□ -1.02
PABPC4-223ENST00000529216 RXFP1Q9HBX9 757 aa8.7□□□□□ -1.02
PABPC4-223ENST00000529216 FAM49BQ9NUQ9 324 aa8.7□□□□□ -1.02
PABPC4-223ENST00000529216 FNIP2Q9P278 1114 aa8.7□□□□□ -1.02
PABPC4-223ENST00000529216 HESX1Q9UBX0 185 aa8.7□□□□□ -1.02
PABPC4-223ENST00000529216 TSPAN16Q9UKR8 245 aa8.7□□□□□ -1.02
PABPC4-223ENST00000529216 CEP83Q9Y592 693 aa8.7□□□□□ -1.02
PABPC4-223ENST00000529216 IRAK3Q9Y616 596 aa8.7□□□□□ -1.02
PABPC4-223ENST00000529216 ATP8B3O60423 1300 aa8.7□□□□□ -1.02
PABPC4-223ENST00000529216 TDRD15B5MCY1 1934 aaKnown RBP8.7□□□□□ -1.02
PABPC4-223ENST00000529216 TNRC18O15417 2968 aaPredicted RBP8.69□□□□□ -1.02
PABPC4-223ENST00000529216 TMEM265A0A087WTH1 108 aa8.69□□□□□ -1.02
PABPC4-223ENST00000529216 MYBPHLA2RUH7 354 aa8.69□□□□□ -1.02
PABPC4-223ENST00000529216 EIF3CLB5ME19 914 aaKnown RBP8.69□□□□□ -1.02
PABPC4-223ENST00000529216 M0QYV0 167 aa8.69□□□□□ -1.02
PABPC4-223ENST00000529216 DDX3XO00571 662 aaKnown RBP eCLIP8.69□□□□□ -1.02
PABPC4-223ENST00000529216 FSCN2O14926 492 aa8.69□□□□□ -1.02
PABPC4-223ENST00000529216 AKR1B10O60218 316 aa8.69□□□□□ -1.02
PABPC4-223ENST00000529216 LILRB3O75022 631 aa8.69□□□□□ -1.02
PABPC4-223ENST00000529216 MICAL2O94851 1124 aa8.69□□□□□ -1.02
PABPC4-223ENST00000529216 NDUFA10O95299 355 aa8.69□□□□□ -1.02
PABPC4-223ENST00000529216 LCA5LO95447 670 aa8.69□□□□□ -1.02
PABPC4-223ENST00000529216 CALCAP01258 141 aa8.69□□□□□ -1.02
PABPC4-223ENST00000529216 CYP1A1P04798 512 aaPredicted RBP8.69□□□□□ -1.02
PABPC4-223ENST00000529216 SETSIPP0DME0 302 aa8.69□□□□□ -1.02
PABPC4-223ENST00000529216 CCDC130P13994 396 aa8.69□□□□□ -1.02
PABPC4-223ENST00000529216 CPB1P15086 417 aa8.69□□□□□ -1.02
PABPC4-223ENST00000529216 TNFAIP3P21580 790 aa8.69□□□□□ -1.02
PABPC4-223ENST00000529216 CDH5P33151 784 aaPredicted RBP8.69□□□□□ -1.02
PABPC4-223ENST00000529216 NDUFV1P49821 464 aa8.69□□□□□ -1.02
PABPC4-223ENST00000529216 BCAT1P54687 386 aa8.69□□□□□ -1.02
PABPC4-223ENST00000529216 GPR17Q13304 367 aa8.69□□□□□ -1.02
PABPC4-223ENST00000529216 SMC1AQ14683 1233 aaKnown RBP8.69□□□□□ -1.02
PABPC4-223ENST00000529216 SLC18A3Q16572 532 aa8.69□□□□□ -1.02
PABPC4-223ENST00000529216 CCDC142Q17RM4 750 aa8.69□□□□□ -1.02
PABPC4-223ENST00000529216 CLEC16AQ2KHT3 1053 aa8.69□□□□□ -1.02
PABPC4-223ENST00000529216 GOLGA7BQ2TAP0 167 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms