RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 PPEF2O14830 753 aa8.42□□□□□ -1.06
SSBP3-211ENST00000528787 TEX33O43247 280 aa8.42□□□□□ -1.06
SSBP3-211ENST00000528787 ADCY5O95622 1261 aa8.42□□□□□ -1.06
SSBP3-211ENST00000528787 POU2F2P09086 479 aa8.42□□□□□ -1.06
SSBP3-211ENST00000528787 HOXB8P17481 243 aaPredicted RBP8.42□□□□□ -1.06
SSBP3-211ENST00000528787 OR1D2P34982 312 aa8.42□□□□□ -1.06
SSBP3-211ENST00000528787 PBX1P40424 430 aa8.42□□□□□ -1.06
SSBP3-211ENST00000528787 PBX3P40426 434 aa8.42□□□□□ -1.06
SSBP3-211ENST00000528787 ACADSBP45954 432 aa8.42□□□□□ -1.06
SSBP3-211ENST00000528787 NDST1P52848 882 aa8.42□□□□□ -1.06
SSBP3-211ENST00000528787 BCAT1P54687 386 aa8.42□□□□□ -1.06
SSBP3-211ENST00000528787 EPHB3P54753 998 aa8.42□□□□□ -1.06
SSBP3-211ENST00000528787 CDK17Q00537 523 aa8.42□□□□□ -1.06
SSBP3-211ENST00000528787 CYP27A1Q02318 531 aa8.42□□□□□ -1.06
SSBP3-211ENST00000528787 CNGA2Q16280 664 aa8.42□□□□□ -1.06
SSBP3-211ENST00000528787 SLC39A12Q504Y0 691 aa8.42□□□□□ -1.06
SSBP3-211ENST00000528787 HABP4Q5JVS0 413 aaKnown RBP8.42□□□□□ -1.06
SSBP3-211ENST00000528787 RTP2Q5QGT7 225 aa8.42□□□□□ -1.06
SSBP3-211ENST00000528787 PLPP4Q5VZY2 271 aa8.42□□□□□ -1.06
SSBP3-211ENST00000528787 ARHGAP17Q68EM7 881 aa8.42□□□□□ -1.06
SSBP3-211ENST00000528787 IQCEQ6IPM2 695 aa8.42□□□□□ -1.06
SSBP3-211ENST00000528787 SPOPLQ6IQ16 392 aa8.42□□□□□ -1.06
SSBP3-211ENST00000528787 FAM171BQ6P995 826 aa8.42□□□□□ -1.06
SSBP3-211ENST00000528787 TMC6Q7Z403 805 aa8.42□□□□□ -1.06
SSBP3-211ENST00000528787 TADA2BQ86TJ2 420 aa8.42□□□□□ -1.06
SSBP3-211ENST00000528787 TCEAL8Q8IYN2 117 aa8.42□□□□□ -1.06
SSBP3-211ENST00000528787 PIAS4Q8N2W9 510 aaPredicted RBP8.42□□□□□ -1.06
SSBP3-211ENST00000528787 TMEM35BQ8NCS4 154 aa8.42□□□□□ -1.06
SSBP3-211ENST00000528787 IPO4Q8TEX9 1081 aaKnown RBP8.42□□□□□ -1.06
SSBP3-211ENST00000528787 KBTBD7Q8WVZ9 684 aa8.42□□□□□ -1.06
SSBP3-211ENST00000528787 GOLGA1Q92805 767 aa8.42□□□□□ -1.06
SSBP3-211ENST00000528787 TATDN2Q93075 761 aa8.42□□□□□ -1.06
SSBP3-211ENST00000528787 CYFIP2Q96F07 1278 aa8.42□□□□□ -1.06
SSBP3-211ENST00000528787 TRIM11Q96F44 468 aa8.42□□□□□ -1.06
SSBP3-211ENST00000528787 CALR3Q96L12 384 aaKnown RBP8.42□□□□□ -1.06
SSBP3-211ENST00000528787 PANX2Q96RD6 677 aa8.42□□□□□ -1.06
SSBP3-211ENST00000528787 HNRNPABQ99729 332 aaKnown RBP8.42□□□□□ -1.06
SSBP3-211ENST00000528787 CXCL16Q9H2A7 254 aa8.42□□□□□ -1.06
SSBP3-211ENST00000528787 GANQ9H2C0 597 aa8.42□□□□□ -1.06
SSBP3-211ENST00000528787 FBXO44Q9H4M3 255 aa8.42□□□□□ -1.06
SSBP3-211ENST00000528787 SMYD3Q9H7B4 428 aa8.42□□□□□ -1.06
SSBP3-211ENST00000528787 APOBEC3GQ9HC16 384 aaKnown RBP8.42□□□□□ -1.06
SSBP3-211ENST00000528787 NLRC4Q9NPP4 1024 aa8.42□□□□□ -1.06
SSBP3-211ENST00000528787 ZDHHC7Q9NXF8 308 aa8.42□□□□□ -1.06
SSBP3-211ENST00000528787 AIPL1Q9NZN9 384 aa8.42□□□□□ -1.06
SSBP3-211ENST00000528787 LCMT1Q9UIC8 334 aa8.42□□□□□ -1.06
SSBP3-211ENST00000528787 POLIQ9UNA4 740 aa8.42□□□□□ -1.06
SSBP3-211ENST00000528787 FAM50BQ9Y247 325 aa8.42□□□□□ -1.06
SSBP3-211ENST00000528787 FHOD1Q9Y613 1164 aa8.42□□□□□ -1.06
SSBP3-211ENST00000528787 TRIOBPQ9H2D6 2365 aa8.41□□□□□ -1.06
SSBP3-211ENST00000528787 CLUHO75153 1309 aa8.41□□□□□ -1.06
SSBP3-211ENST00000528787 SOBPA7XYQ1 873 aa8.41□□□□□ -1.06
SSBP3-211ENST00000528787 I3L4J1 428 aa8.41□□□□□ -1.06
SSBP3-211ENST00000528787 C2CD2LO14523 706 aa8.41□□□□□ -1.06
SSBP3-211ENST00000528787 GRM6O15303 877 aa8.41□□□□□ -1.06
SSBP3-211ENST00000528787 TEX28O15482 410 aa8.41□□□□□ -1.06
SSBP3-211ENST00000528787 THAP12O43422 761 aa8.41□□□□□ -1.06
SSBP3-211ENST00000528787 TBC1D4O60343 1298 aa8.41□□□□□ -1.06
SSBP3-211ENST00000528787 B4GALT3O60512 393 aa8.41□□□□□ -1.06
SSBP3-211ENST00000528787 ABLIM3O94929 683 aa8.41□□□□□ -1.06
SSBP3-211ENST00000528787 RTN3O95197 1032 aaPredicted RBP8.41□□□□□ -1.06
SSBP3-211ENST00000528787 LRG1P02750 347 aa8.41□□□□□ -1.06
SSBP3-211ENST00000528787 SERPING1P05155 500 aa8.41□□□□□ -1.06
SSBP3-211ENST00000528787 PDGFRBP09619 1106 aa8.41□□□□□ -1.06
SSBP3-211ENST00000528787 FAM200BP0CF97 657 aa8.41□□□□□ -1.06
SSBP3-211ENST00000528787 HNRNPH3P31942 346 aaKnown RBP8.41□□□□□ -1.06
SSBP3-211ENST00000528787 PRKCIP41743 596 aa8.41□□□□□ -1.06
SSBP3-211ENST00000528787 JAM2P57087 298 aa8.41□□□□□ -1.06
SSBP3-211ENST00000528787 ROR1Q01973 937 aa8.41□□□□□ -1.06
SSBP3-211ENST00000528787 KLHL30Q0D2K2 578 aa8.41□□□□□ -1.06
SSBP3-211ENST00000528787 BST2Q10589 180 aaKnown RBP8.41□□□□□ -1.06
SSBP3-211ENST00000528787 PABPC1LQ4VXU2 614 aaKnown RBP8.41□□□□□ -1.06
SSBP3-211ENST00000528787 TDRD12Q587J7 1177 aaKnown RBP8.41□□□□□ -1.06
SSBP3-211ENST00000528787 PPM1LQ5SGD2 360 aa8.41□□□□□ -1.06
SSBP3-211ENST00000528787 C10orf76Q5T2E6 689 aa8.41□□□□□ -1.06
SSBP3-211ENST00000528787 CES5AQ6NT32 575 aa8.41□□□□□ -1.06
SSBP3-211ENST00000528787 LCLAT1Q6UWP7 414 aa8.41□□□□□ -1.06
SSBP3-211ENST00000528787 CD300LGQ6UXG3 332 aa8.41□□□□□ -1.06
SSBP3-211ENST00000528787 TMEM173Q86WV6 379 aaPredicted RBP8.41□□□□□ -1.06
SSBP3-211ENST00000528787 ZDHHC17Q8IUH5 632 aa8.41□□□□□ -1.06
SSBP3-211ENST00000528787 ARHGEF19Q8IW93 802 aa8.41□□□□□ -1.06
SSBP3-211ENST00000528787 ARHGAP18Q8N392 663 aa8.41□□□□□ -1.06
SSBP3-211ENST00000528787 ANKRD52Q8NB46 1076 aa8.41□□□□□ -1.06
SSBP3-211ENST00000528787 PDZD8Q8NEN9 1154 aa8.41□□□□□ -1.06
SSBP3-211ENST00000528787 STK32AQ8WU08 396 aa8.41□□□□□ -1.06
SSBP3-211ENST00000528787 RABGGTAQ92696 567 aa8.41□□□□□ -1.06
SSBP3-211ENST00000528787 SPATA17Q96L03 361 aa8.41□□□□□ -1.06
SSBP3-211ENST00000528787 KLHL5Q96PQ7 755 aa8.41□□□□□ -1.06
SSBP3-211ENST00000528787 GCNAQ96QF7 691 aa8.41□□□□□ -1.06
SSBP3-211ENST00000528787 CDK5RAP1Q96SZ6 601 aaKnown RBP8.41□□□□□ -1.06
SSBP3-211ENST00000528787 DNAJC7Q99615 494 aa8.41□□□□□ -1.06
SSBP3-211ENST00000528787 MRPL45Q9BRJ2 306 aaKnown RBP8.41□□□□□ -1.06
SSBP3-211ENST00000528787 RHOBTB2Q9BYZ6 727 aa8.41□□□□□ -1.06
SSBP3-211ENST00000528787 LHX5Q9H2C1 402 aa8.41□□□□□ -1.06
SSBP3-211ENST00000528787 SFXN1Q9H9B4 322 aa8.41□□□□□ -1.06
SSBP3-211ENST00000528787 SIX2Q9NPC8 291 aa8.41□□□□□ -1.06
SSBP3-211ENST00000528787 DMAP1Q9NPF5 467 aaPredicted RBP8.41□□□□□ -1.06
SSBP3-211ENST00000528787 STRIP2Q9ULQ0 834 aa8.41□□□□□ -1.06
SSBP3-211ENST00000528787 PCDHGC3Q9UN70 934 aa8.41□□□□□ -1.06
SSBP3-211ENST00000528787 SSU72P8A0A1W2PR75 194 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms