RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 DPH5Q9H2P9 285 aa15.6■□□□□ 0.09
ECHDC1-220ENST00000528402 PLEKHA4Q9H4M7 779 aa15.6■□□□□ 0.09
ECHDC1-220ENST00000528402 GOLGA6AQ9NYA3 693 aa15.6■□□□□ 0.09
ECHDC1-220ENST00000528402 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.6■□□□□ 0.09
ECHDC1-220ENST00000528402 USTQ9Y2C2 406 aa15.6■□□□□ 0.09
ECHDC1-220ENST00000528402 TRIP11Q15643 1979 aa15.6■□□□□ 0.09
ECHDC1-220ENST00000528402 TREHO43280 583 aa15.6■□□□□ 0.09
ECHDC1-220ENST00000528402 MICAL2O94851 1124 aa15.6■□□□□ 0.09
ECHDC1-220ENST00000528402 DESP17661 470 aa15.6■□□□□ 0.09
ECHDC1-220ENST00000528402 HSD17B3P37058 310 aa15.6■□□□□ 0.09
ECHDC1-220ENST00000528402 GPD2P43304 727 aa15.6■□□□□ 0.09
ECHDC1-220ENST00000528402 NDST1P52848 882 aa15.6■□□□□ 0.09
ECHDC1-220ENST00000528402 TAS2R40P59535 323 aa15.6■□□□□ 0.09
ECHDC1-220ENST00000528402 RPL7AP62424 266 aaKnown RBP15.6■□□□□ 0.09
ECHDC1-220ENST00000528402 NFX1Q12986 1120 aaKnown RBP15.6■□□□□ 0.09
ECHDC1-220ENST00000528402 KLF1Q13351 362 aaPredicted RBP15.6■□□□□ 0.09
ECHDC1-220ENST00000528402 PPP1R7Q15435 360 aa15.6■□□□□ 0.09
ECHDC1-220ENST00000528402 PTPN20Q4JDL3 420 aa15.6■□□□□ 0.09
ECHDC1-220ENST00000528402 TTC27Q6P3X3 843 aa15.6■□□□□ 0.09
ECHDC1-220ENST00000528402 TMC3Q7Z5M5 1100 aa15.6■□□□□ 0.09
ECHDC1-220ENST00000528402 CPNE8Q86YQ8 564 aa15.6■□□□□ 0.09
ECHDC1-220ENST00000528402 STK32AQ8WU08 396 aa15.6■□□□□ 0.09
ECHDC1-220ENST00000528402 PIK3R5Q8WYR1 880 aa15.6■□□□□ 0.09
ECHDC1-220ENST00000528402 UPF3AQ9H1J1 476 aaKnown RBP15.6■□□□□ 0.09
ECHDC1-220ENST00000528402 FAM204AQ9H8W3 233 aa15.6■□□□□ 0.09
ECHDC1-220ENST00000528402 ZDHHC18Q9NUE0 388 aa15.6■□□□□ 0.09
ECHDC1-220ENST00000528402 GINS2Q9Y248 185 aa15.6■□□□□ 0.09
ECHDC1-220ENST00000528402 SNX24Q9Y343 169 aa15.6■□□□□ 0.09
ECHDC1-220ENST00000528402 PDCD11Q14690 1871 aaKnown RBP15.59■□□□□ 0.09
ECHDC1-220ENST00000528402 FAM155AB1AL88 458 aaPredicted RBP15.59■□□□□ 0.09
ECHDC1-220ENST00000528402 HMGB1P1B2RPK0 211 aaPredicted RBP15.59■□□□□ 0.09
ECHDC1-220ENST00000528402 RALAP11233 206 aa15.59■□□□□ 0.09
ECHDC1-220ENST00000528402 FGFR4P22455 802 aa15.59■□□□□ 0.09
ECHDC1-220ENST00000528402 PSMA2P25787 234 aa15.59■□□□□ 0.09
ECHDC1-220ENST00000528402 SSTR3P32745 418 aaPredicted RBP15.59■□□□□ 0.09
ECHDC1-220ENST00000528402 DHX9Q08211 1270 aaKnown RBP15.59■□□□□ 0.09
ECHDC1-220ENST00000528402 CRHR2Q13324 411 aa15.59■□□□□ 0.09
ECHDC1-220ENST00000528402 PTK6Q13882 451 aa15.59■□□□□ 0.09
ECHDC1-220ENST00000528402 EMC10Q5UCC4 262 aa15.59■□□□□ 0.09
ECHDC1-220ENST00000528402 LLGL2Q6P1M3 1020 aa15.59■□□□□ 0.09
ECHDC1-220ENST00000528402 DPH6Q7L8W6 267 aa15.59■□□□□ 0.09
ECHDC1-220ENST00000528402 REM2Q8IYK8 340 aaPredicted RBP15.59■□□□□ 0.09
ECHDC1-220ENST00000528402 HACE1Q8IYU2 909 aa15.59■□□□□ 0.09
ECHDC1-220ENST00000528402 ART4Q93070 314 aa15.59■□□□□ 0.09
ECHDC1-220ENST00000528402 EIF2AQ9BY44 585 aaKnown RBP15.59■□□□□ 0.09
ECHDC1-220ENST00000528402 TXLNGYQ9BZA5 131 aa15.59■□□□□ 0.09
ECHDC1-220ENST00000528402 FOXP3Q9BZS1 431 aa15.59■□□□□ 0.09
ECHDC1-220ENST00000528402 NEUROG2Q9H2A3 272 aa15.59■□□□□ 0.09
ECHDC1-220ENST00000528402 CDHR5Q9HBB8 845 aa15.59■□□□□ 0.09
ECHDC1-220ENST00000528402 CHST12Q9NRB3 414 aa15.59■□□□□ 0.09
ECHDC1-220ENST00000528402 ASNSD1Q9NWL6 643 aa15.59■□□□□ 0.09
ECHDC1-220ENST00000528402 GDAP2Q9NXN4 497 aa15.59■□□□□ 0.09
ECHDC1-220ENST00000528402 PLAAQ9Y263 795 aa15.59■□□□□ 0.09
ECHDC1-220ENST00000528402 DRG1Q9Y295 367 aaKnown RBP15.59■□□□□ 0.09
ECHDC1-220ENST00000528402 TCRBV7S2A1N4TA0A589 114 aa15.58■□□□□ 0.08
ECHDC1-220ENST00000528402 M0QYV0 167 aa15.58■□□□□ 0.08
ECHDC1-220ENST00000528402 PIRO00625 290 aa15.58■□□□□ 0.08
ECHDC1-220ENST00000528402 RNF8O76064 485 aa15.58■□□□□ 0.08
ECHDC1-220ENST00000528402 TMEM62Q0P6H9 643 aa15.58■□□□□ 0.08
ECHDC1-220ENST00000528402 PDCLQ13371 301 aa15.58■□□□□ 0.08
ECHDC1-220ENST00000528402 TFDP3Q5H9I0 405 aa15.58■□□□□ 0.08
ECHDC1-220ENST00000528402 C9orf57Q5W0N0 161 aa15.58■□□□□ 0.08
ECHDC1-220ENST00000528402 ARHGAP17Q68EM7 881 aa15.58■□□□□ 0.08
ECHDC1-220ENST00000528402 RPAINQ86UA6 219 aa15.58■□□□□ 0.08
ECHDC1-220ENST00000528402 XYLT1Q86Y38 959 aa15.58■□□□□ 0.08
ECHDC1-220ENST00000528402 ZDHHC17Q8IUH5 632 aa15.58■□□□□ 0.08
ECHDC1-220ENST00000528402 CCDC89Q8N998 374 aa15.58■□□□□ 0.08
ECHDC1-220ENST00000528402 TTC13Q8NBP0 860 aa15.58■□□□□ 0.08
ECHDC1-220ENST00000528402 SLITRK1Q96PX8 696 aa15.58■□□□□ 0.08
ECHDC1-220ENST00000528402 TWNKQ96RR1 684 aa15.58■□□□□ 0.08
ECHDC1-220ENST00000528402 TRIM31Q9BZY9 425 aa15.58■□□□□ 0.08
ECHDC1-220ENST00000528402 CYLDQ9NQC7 956 aa15.58■□□□□ 0.08
ECHDC1-220ENST00000528402 PRDM10Q9NQV6 1147 aa15.58■□□□□ 0.08
ECHDC1-220ENST00000528402 GRHL1Q9NZI5 618 aa15.58■□□□□ 0.08
ECHDC1-220ENST00000528402 PIN4Q9Y237 131 aaKnown RBP15.58■□□□□ 0.08
ECHDC1-220ENST00000528402 TRIP12Q14669 1992 aaPredicted RBP15.57■□□□□ 0.08
ECHDC1-220ENST00000528402 RECQL4O94761 1208 aa15.57■□□□□ 0.08
ECHDC1-220ENST00000528402 ECM2O94769 699 aaPredicted RBP15.57■□□□□ 0.08
ECHDC1-220ENST00000528402 KRT1P04264 644 aa15.57■□□□□ 0.08
ECHDC1-220ENST00000528402 MYZAPP0CAP1 466 aa15.57■□□□□ 0.08
ECHDC1-220ENST00000528402 CYBAP13498 195 aa15.57■□□□□ 0.08
ECHDC1-220ENST00000528402 RARGP13631 454 aa15.57■□□□□ 0.08
ECHDC1-220ENST00000528402 PCK1P35558 622 aa15.57■□□□□ 0.08
ECHDC1-220ENST00000528402 PLTPP55058 493 aa15.57■□□□□ 0.08
ECHDC1-220ENST00000528402 BEX3Q00994 111 aa15.57■□□□□ 0.08
ECHDC1-220ENST00000528402 ZFYVE27Q5T4F4 411 aa15.57■□□□□ 0.08
ECHDC1-220ENST00000528402 ARFGAP2Q8N6H7 521 aa15.57■□□□□ 0.08
ECHDC1-220ENST00000528402 UBLCP1Q8WVY7 318 aaPredicted RBP15.57■□□□□ 0.08
ECHDC1-220ENST00000528402 C1orf54Q8WWF1 131 aa15.57■□□□□ 0.08
ECHDC1-220ENST00000528402 ZMAT2Q96NC0 199 aaKnown RBP15.57■□□□□ 0.08
ECHDC1-220ENST00000528402 CPXM1Q96SM3 734 aa15.57■□□□□ 0.08
ECHDC1-220ENST00000528402 HESX1Q9UBX0 185 aa15.57■□□□□ 0.08
ECHDC1-220ENST00000528402 SNX9Q9Y5X1 595 aa15.57■□□□□ 0.08
ECHDC1-220ENST00000528402 SMIM28A0A1B0GU29 152 aa15.56■□□□□ 0.08
ECHDC1-220ENST00000528402 F8VP50 259 aa15.56■□□□□ 0.08
ECHDC1-220ENST00000528402 H0YGN5 161 aa15.56■□□□□ 0.08
ECHDC1-220ENST00000528402 NUDT17P0C025 328 aa15.56■□□□□ 0.08
ECHDC1-220ENST00000528402 C6orf222P0C671 652 aaPredicted RBP15.56■□□□□ 0.08
ECHDC1-220ENST00000528402 RFC1P35251 1148 aaPredicted RBP15.56■□□□□ 0.08
ECHDC1-220ENST00000528402 SCNN1AP37088 669 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms