RNA–Protein interactions for RNA: ENST00000528339.5

SORL1-207, Transcript of sortilin related receptor 1, humanhuman

TSL 2

Gene SORL1, Length 3,703 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-207ENST00000528339 TMEM199Q8N511 208 aa8.36□□□□□ -1.07
SORL1-207ENST00000528339 SLC22A17Q8WUG5 538 aa8.36□□□□□ -1.07
SORL1-207ENST00000528339 IGSF21Q96ID5 467 aa8.36□□□□□ -1.07
SORL1-207ENST00000528339 ACP6Q9NPH0 428 aa8.36□□□□□ -1.07
SORL1-207ENST00000528339 CXXC1Q9P0U4 656 aaPredicted RBP8.36□□□□□ -1.07
SORL1-207ENST00000528339 DSEQ9UL01 958 aa8.36□□□□□ -1.07
SORL1-207ENST00000528339 PCDHA13Q9Y5I0 950 aa8.36□□□□□ -1.07
SORL1-207ENST00000528339 HCRTO43612 131 aa8.36□□□□□ -1.07
SORL1-207ENST00000528339 LPXNO60711 386 aa8.36□□□□□ -1.07
SORL1-207ENST00000528339 ERBB2P04626 1255 aa8.36□□□□□ -1.07
SORL1-207ENST00000528339 DNAJB1P25685 340 aa8.36□□□□□ -1.07
SORL1-207ENST00000528339 INTS6LQ5JSJ4 861 aaKnown RBP8.36□□□□□ -1.07
SORL1-207ENST00000528339 KLHDC8BQ8IXV7 354 aa8.36□□□□□ -1.07
SORL1-207ENST00000528339 ZNF683Q8IZ20 524 aa8.36□□□□□ -1.07
SORL1-207ENST00000528339 MYCBPAPQ8TBZ2 947 aa8.36□□□□□ -1.07
SORL1-207ENST00000528339 CCDC127Q96BQ5 260 aa8.36□□□□□ -1.07
SORL1-207ENST00000528339 MYRFLQ96LU7 910 aa8.36□□□□□ -1.07
SORL1-207ENST00000528339 SHROOM3Q8TF72 1996 aa8.36□□□□□ -1.07
SORL1-207ENST00000528339 CYP26A1O43174 497 aa8.36□□□□□ -1.07
SORL1-207ENST00000528339 GREM1O60565 184 aa8.36□□□□□ -1.07
SORL1-207ENST00000528339 OLFM2O95897 454 aa8.36□□□□□ -1.07
SORL1-207ENST00000528339 DLATP10515 647 aaKnown RBP8.36□□□□□ -1.07
SORL1-207ENST00000528339 SKILP12757 684 aa8.36□□□□□ -1.07
SORL1-207ENST00000528339 NDST1P52848 882 aa8.36□□□□□ -1.07
SORL1-207ENST00000528339 FPGSQ05932 587 aa8.36□□□□□ -1.07
SORL1-207ENST00000528339 KIAA1958Q8N8K9 716 aa8.36□□□□□ -1.07
SORL1-207ENST00000528339 ELMO3Q96BJ8 720 aa8.36□□□□□ -1.07
SORL1-207ENST00000528339 ARHGEF26Q96DR7 871 aa8.36□□□□□ -1.07
SORL1-207ENST00000528339 FUBP3Q96I24 572 aaKnown RBP eCLIP8.36□□□□□ -1.07
SORL1-207ENST00000528339 PACSIN1Q9BY11 444 aa8.36□□□□□ -1.07
SORL1-207ENST00000528339 GTF3C4Q9UKN8 822 aa8.36□□□□□ -1.07
SORL1-207ENST00000528339 AGAP1Q9UPQ3 857 aa8.36□□□□□ -1.07
SORL1-207ENST00000528339 PLXNA2O75051 1894 aa8.35□□□□□ -1.07
SORL1-207ENST00000528339 TCF20Q9UGU0 1960 aaKnown RBP8.35□□□□□ -1.07
SORL1-207ENST00000528339 A0A1W2PPC1 479 aa8.35□□□□□ -1.07
SORL1-207ENST00000528339 XPOTO43592 962 aaKnown RBP8.35□□□□□ -1.07
SORL1-207ENST00000528339 MYBL1P10243 752 aa8.35□□□□□ -1.07
SORL1-207ENST00000528339 CHRM1P11229 460 aaPredicted RBP8.35□□□□□ -1.07
SORL1-207ENST00000528339 TCF3P15923 654 aa8.35□□□□□ -1.07
SORL1-207ENST00000528339 YARSP54577 528 aaKnown RBP8.35□□□□□ -1.07
SORL1-207ENST00000528339 BCAR1P56945 870 aa8.35□□□□□ -1.07
SORL1-207ENST00000528339 GFPT1Q06210 699 aaPredicted RBP8.35□□□□□ -1.07
SORL1-207ENST00000528339 ASIC2Q16515 512 aa8.35□□□□□ -1.07
SORL1-207ENST00000528339 C5orf22Q49AR2 442 aa8.35□□□□□ -1.07
SORL1-207ENST00000528339 DCAF12L1Q5VU92 463 aa8.35□□□□□ -1.07
SORL1-207ENST00000528339 TAS1R1Q7RTX1 841 aa8.35□□□□□ -1.07
SORL1-207ENST00000528339 RPUSD2Q8IZ73 545 aaKnown RBP8.35□□□□□ -1.07
SORL1-207ENST00000528339 BADQ92934 168 aa8.35□□□□□ -1.07
SORL1-207ENST00000528339 FAF2Q96CS3 445 aa8.35□□□□□ -1.07
SORL1-207ENST00000528339 C8orf48Q96LL4 319 aa8.35□□□□□ -1.07
SORL1-207ENST00000528339 SMOQ99835 787 aa8.35□□□□□ -1.07
SORL1-207ENST00000528339 GPR62Q9BZJ7 368 aa8.35□□□□□ -1.07
SORL1-207ENST00000528339 TMEM39AQ9NV64 488 aa8.35□□□□□ -1.07
SORL1-207ENST00000528339 GRID2IPA4D2P6 1211 aa8.35□□□□□ -1.07
SORL1-207ENST00000528339 ANKRD62A6NC57 917 aa8.35□□□□□ -1.07
SORL1-207ENST00000528339 XPO1O14980 1071 aaKnown RBP8.35□□□□□ -1.07
SORL1-207ENST00000528339 CDK11BP21127 795 aaKnown RBP8.35□□□□□ -1.07
SORL1-207ENST00000528339 RAP1GAPP47736 663 aa8.35□□□□□ -1.07
SORL1-207ENST00000528339 LHX1P48742 406 aa8.35□□□□□ -1.07
SORL1-207ENST00000528339 ERVK-21P61565 698 aa8.35□□□□□ -1.07
SORL1-207ENST00000528339 SEMA3BQ13214 749 aa8.35□□□□□ -1.07
SORL1-207ENST00000528339 IKBKEQ14164 716 aa8.35□□□□□ -1.07
SORL1-207ENST00000528339 SIX1Q15475 284 aaPredicted RBP8.35□□□□□ -1.07
SORL1-207ENST00000528339 PTPN20Q4JDL3 420 aa8.35□□□□□ -1.07
SORL1-207ENST00000528339 MEI1Q5TIA1 1274 aa8.35□□□□□ -1.07
SORL1-207ENST00000528339 TWF2Q6IBS0 349 aaKnown RBP8.35□□□□□ -1.07
SORL1-207ENST00000528339 DENND1BQ6P3S1 775 aa8.35□□□□□ -1.07
SORL1-207ENST00000528339 CLEC20AQ6ZU45 233 aa8.35□□□□□ -1.07
SORL1-207ENST00000528339 ANKRD52Q8NB46 1076 aa8.35□□□□□ -1.07
SORL1-207ENST00000528339 TRMT2BQ96GJ1 504 aaKnown RBP8.35□□□□□ -1.07
SORL1-207ENST00000528339 SENP8Q96LD8 212 aa8.35□□□□□ -1.07
SORL1-207ENST00000528339 FNBP1Q96RU3 617 aa8.35□□□□□ -1.07
SORL1-207ENST00000528339 CRISPLD1Q9H336 500 aa8.35□□□□□ -1.07
SORL1-207ENST00000528339 ADAM28Q9UKQ2 775 aa8.35□□□□□ -1.07
SORL1-207ENST00000528339 TMEM191CA6NGB0 347 aa8.34□□□□□ -1.07
SORL1-207ENST00000528339 MICAL2O94851 1124 aa8.34□□□□□ -1.07
SORL1-207ENST00000528339 SOD2P04179 222 aa8.34□□□□□ -1.07
SORL1-207ENST00000528339 TMEM191BP0C7N4 346 aa8.34□□□□□ -1.07
SORL1-207ENST00000528339 BPIFB4P59827 614 aa8.34□□□□□ -1.07
SORL1-207ENST00000528339 OGDHQ02218 1023 aa8.34□□□□□ -1.07
SORL1-207ENST00000528339 UBE3AQ05086 875 aa8.34□□□□□ -1.07
SORL1-207ENST00000528339 ITIH3Q06033 890 aa8.34□□□□□ -1.07
SORL1-207ENST00000528339 SMARCB1Q12824 385 aa8.34□□□□□ -1.07
SORL1-207ENST00000528339 TPD52L1Q16890 204 aaPredicted RBP8.34□□□□□ -1.07
SORL1-207ENST00000528339 CCDC142Q17RM4 750 aa8.34□□□□□ -1.07
SORL1-207ENST00000528339 PPP1R26Q5T8A7 1209 aaPredicted RBP8.34□□□□□ -1.07
SORL1-207ENST00000528339 TMEM150AQ86TG1 271 aa8.34□□□□□ -1.07
SORL1-207ENST00000528339 HERC6Q8IVU3 1022 aa8.34□□□□□ -1.07
SORL1-207ENST00000528339 FAM217AQ8IXS0 508 aa8.34□□□□□ -1.07
SORL1-207ENST00000528339 B3GALNT2Q8NCR0 500 aa8.34□□□□□ -1.07
SORL1-207ENST00000528339 ACRBPQ8NEB7 543 aa8.34□□□□□ -1.07
SORL1-207ENST00000528339 HDAC7Q8WUI4 952 aa8.34□□□□□ -1.07
SORL1-207ENST00000528339 KLK14Q9P0G3 267 aa8.34□□□□□ -1.07
SORL1-207ENST00000528339 CACNG4Q9UBN1 327 aa8.34□□□□□ -1.07
SORL1-207ENST00000528339 BEST1O76090 585 aa8.34□□□□□ -1.07
SORL1-207ENST00000528339 TNNI1P19237 187 aa8.34□□□□□ -1.07
SORL1-207ENST00000528339 TRIM21P19474 475 aaKnown RBP8.34□□□□□ -1.07
SORL1-207ENST00000528339 CDH8P55286 799 aa8.34□□□□□ -1.07
SORL1-207ENST00000528339 SLC25A11Q02978 314 aaKnown RBP8.34□□□□□ -1.07
SORL1-207ENST00000528339 NCBP1Q09161 790 aaKnown RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms