RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 PFKPQ01813 784 aa16.64■□□□□ 0.25
CAPN1-213ENST00000527897 TCF15Q12870 199 aa16.64■□□□□ 0.25
CAPN1-213ENST00000527897 PNOCQ13519 176 aa16.64■□□□□ 0.25
CAPN1-213ENST00000527897 MLF2Q15773 248 aaPredicted RBP16.64■□□□□ 0.25
CAPN1-213ENST00000527897 DDR2Q16832 855 aa16.64■□□□□ 0.25
CAPN1-213ENST00000527897 WDR72Q3MJ13 1102 aa16.64■□□□□ 0.25
CAPN1-213ENST00000527897 SLC44A4Q53GD3 710 aa16.64■□□□□ 0.25
CAPN1-213ENST00000527897 ARHGAP15Q53QZ3 475 aa16.64■□□□□ 0.25
CAPN1-213ENST00000527897 GPR158Q5T848 1215 aa16.64■□□□□ 0.25
CAPN1-213ENST00000527897 GAREM2Q75VX8 874 aa16.64■□□□□ 0.25
CAPN1-213ENST00000527897 SCN4BQ8IWT1 228 aa16.64■□□□□ 0.25
CAPN1-213ENST00000527897 OR6B3Q8NGW1 331 aa16.64■□□□□ 0.25
CAPN1-213ENST00000527897 PLEKHO2Q8TD55 490 aa16.64■□□□□ 0.25
CAPN1-213ENST00000527897 KBTBD7Q8WVZ9 684 aa16.64■□□□□ 0.25
CAPN1-213ENST00000527897 FOXQ1Q9C009 403 aa16.64■□□□□ 0.25
CAPN1-213ENST00000527897 GZF1Q9H116 711 aaPredicted RBP16.64■□□□□ 0.25
CAPN1-213ENST00000527897 BRD9Q9H8M2 597 aa16.64■□□□□ 0.25
CAPN1-213ENST00000527897 FAM86C1Q9NVL1 165 aa16.64■□□□□ 0.25
CAPN1-213ENST00000527897 FRMD4BQ9Y2L6 1034 aa16.64■□□□□ 0.25
CAPN1-213ENST00000527897 COL4A3Q01955 1670 aa16.63■□□□□ 0.25
CAPN1-213ENST00000527897 MYBPHLA2RUH7 354 aa16.63■□□□□ 0.25
CAPN1-213ENST00000527897 GABRDO14764 452 aa16.63■□□□□ 0.25
CAPN1-213ENST00000527897 GALR2O43603 387 aaPredicted RBP16.63■□□□□ 0.25
CAPN1-213ENST00000527897 FGF19O95750 216 aa16.63■□□□□ 0.25
CAPN1-213ENST00000527897 DCNP07585 359 aaKnown RBP16.63■□□□□ 0.25
CAPN1-213ENST00000527897 GDI1P31150 447 aa16.63■□□□□ 0.25
CAPN1-213ENST00000527897 DLG4P78352 724 aa16.63■□□□□ 0.25
CAPN1-213ENST00000527897 CYP27A1Q02318 531 aa16.63■□□□□ 0.25
CAPN1-213ENST00000527897 UBXN2BQ14CS0 331 aa16.63■□□□□ 0.25
CAPN1-213ENST00000527897 TDRD10Q5VZ19 366 aaKnown RBP16.63■□□□□ 0.25
CAPN1-213ENST00000527897 DPH6Q7L8W6 267 aa16.63■□□□□ 0.25
CAPN1-213ENST00000527897 SLC9A9Q8IVB4 645 aa16.63■□□□□ 0.25
CAPN1-213ENST00000527897 SMYD4Q8IYR2 804 aaPredicted RBP16.63■□□□□ 0.25
CAPN1-213ENST00000527897 FMR1NBQ8N0W7 255 aaPredicted RBP16.63■□□□□ 0.25
CAPN1-213ENST00000527897 PARD3BQ8TEW8 1205 aa16.63■□□□□ 0.25
CAPN1-213ENST00000527897 ATOH1Q92858 354 aaPredicted RBP16.63■□□□□ 0.25
CAPN1-213ENST00000527897 ELMO3Q96BJ8 720 aa16.63■□□□□ 0.25
CAPN1-213ENST00000527897 SHDQ96IW2 340 aa16.63■□□□□ 0.25
CAPN1-213ENST00000527897 MRPL45Q9BRJ2 306 aaKnown RBP16.63■□□□□ 0.25
CAPN1-213ENST00000527897 TRMT61BQ9BVS5 477 aaKnown RBP16.63■□□□□ 0.25
CAPN1-213ENST00000527897 GPR88Q9GZN0 384 aa16.63■□□□□ 0.25
CAPN1-213ENST00000527897 DMAC2Q9NW81 257 aa16.63■□□□□ 0.25
CAPN1-213ENST00000527897 HEPACAM2A8MVW5 462 aa16.62■□□□□ 0.25
CAPN1-213ENST00000527897 DPYSL4O14531 572 aa16.62■□□□□ 0.25
CAPN1-213ENST00000527897 CD72P21854 359 aa16.62■□□□□ 0.25
CAPN1-213ENST00000527897 NR2F2P24468 414 aa16.62■□□□□ 0.25
CAPN1-213ENST00000527897 CDC25CP30307 473 aa16.62■□□□□ 0.25
CAPN1-213ENST00000527897 GNL1P36915 607 aaPredicted RBP16.62■□□□□ 0.25
CAPN1-213ENST00000527897 RPL10AP62906 217 aaKnown RBP16.62■□□□□ 0.25
CAPN1-213ENST00000527897 KCNB1Q14721 858 aa16.62■□□□□ 0.25
CAPN1-213ENST00000527897 ZNF699Q32M78 642 aa16.62■□□□□ 0.25
CAPN1-213ENST00000527897 VITQ6UXI7 678 aa16.62■□□□□ 0.25
CAPN1-213ENST00000527897 SCARA5Q6ZMJ2 495 aa16.62■□□□□ 0.25
CAPN1-213ENST00000527897 TPRG1Q6ZUI0 275 aa16.62■□□□□ 0.25
CAPN1-213ENST00000527897 YAF2Q8IY57 180 aa16.62■□□□□ 0.25
CAPN1-213ENST00000527897 SPATA18Q8TC71 538 aa16.62■□□□□ 0.25
CAPN1-213ENST00000527897 ERCC4Q92889 916 aaPredicted RBP16.62■□□□□ 0.25
CAPN1-213ENST00000527897 SYAP1Q96A49 352 aaPredicted RBP16.62■□□□□ 0.25
CAPN1-213ENST00000527897 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.62■□□□□ 0.252e-7■■■■■ 73.6
CAPN1-213ENST00000527897 HEBP1Q9NRV9 189 aa16.62■□□□□ 0.25
CAPN1-213ENST00000527897 CDH9Q9ULB4 789 aa16.62■□□□□ 0.25
CAPN1-213ENST00000527897 SIT1Q9Y3P8 196 aa16.62■□□□□ 0.25
CAPN1-213ENST00000527897 ZNF638Q14966 1978 aaKnown RBP16.61■□□□□ 0.25
CAPN1-213ENST00000527897 PSMC3P17980 439 aa16.61■□□□□ 0.25
CAPN1-213ENST00000527897 WARSP23381 471 aaKnown RBP16.61■□□□□ 0.25
CAPN1-213ENST00000527897 NCOA4Q13772 614 aa16.61■□□□□ 0.25
CAPN1-213ENST00000527897 MDH1BQ5I0G3 518 aa16.61■□□□□ 0.25
CAPN1-213ENST00000527897 PHLDB3Q6NSJ2 640 aa16.61■□□□□ 0.25
CAPN1-213ENST00000527897 C4orf50Q6ZRC1 276 aa16.61■□□□□ 0.25
CAPN1-213ENST00000527897 ALYREFQ86V81 257 aaKnown RBP16.61■□□□□ 0.25
CAPN1-213ENST00000527897 ARID3BQ8IVW6 561 aaPredicted RBP16.61■□□□□ 0.25
CAPN1-213ENST00000527897 GUF1Q8N442 669 aaKnown RBP16.61■□□□□ 0.25
CAPN1-213ENST00000527897 MYLPFQ96A32 169 aa16.61■□□□□ 0.25
CAPN1-213ENST00000527897 PHOX2BQ99453 314 aa16.61■□□□□ 0.25
CAPN1-213ENST00000527897 PKMYT1Q99640 499 aa16.61■□□□□ 0.25
CAPN1-213ENST00000527897 MMRN2Q9H8L6 949 aa16.61■□□□□ 0.25
CAPN1-213ENST00000527897 IL21Q9HBE4 155 aa16.61■□□□□ 0.25
CAPN1-213ENST00000527897 ABCB6Q9NP58 842 aa16.61■□□□□ 0.25
CAPN1-213ENST00000527897 CRTAC1Q9NQ79 661 aa16.61■□□□□ 0.25
CAPN1-213ENST00000527897 MAGEC2Q9UBF1 373 aaPredicted RBP16.61■□□□□ 0.25
CAPN1-213ENST00000527897 NCANO14594 1321 aa16.61■□□□□ 0.25
CAPN1-213ENST00000527897 MIA3Q5JRA6 1907 aa16.6■□□□□ 0.25
CAPN1-213ENST00000527897 TICRRQ7Z2Z1 1910 aa16.6■□□□□ 0.25
CAPN1-213ENST00000527897 A8MXQ7 604 aa16.6■□□□□ 0.25
CAPN1-213ENST00000527897 ZNF263O14978 683 aa16.6■□□□□ 0.25
CAPN1-213ENST00000527897 LRRN2O75325 713 aa16.6■□□□□ 0.25
CAPN1-213ENST00000527897 CSH1P0DML2 217 aa16.6■□□□□ 0.25
CAPN1-213ENST00000527897 CSH2P0DML3 217 aa16.6■□□□□ 0.25
CAPN1-213ENST00000527897 BDNFP23560 247 aa16.6■□□□□ 0.25
CAPN1-213ENST00000527897 ATICP31939 592 aa16.6■□□□□ 0.25
CAPN1-213ENST00000527897 RAP1GAPP47736 663 aa16.6■□□□□ 0.25
CAPN1-213ENST00000527897 NUBP1P53384 320 aa16.6■□□□□ 0.25
CAPN1-213ENST00000527897 AP3M2P53677 418 aa16.6■□□□□ 0.25
CAPN1-213ENST00000527897 CDH8P55286 799 aa16.6■□□□□ 0.25
CAPN1-213ENST00000527897 STARD6P59095 220 aa16.6■□□□□ 0.25
CAPN1-213ENST00000527897 PRKCQQ04759 706 aa16.6■□□□□ 0.25
CAPN1-213ENST00000527897 FAM160A1Q05DH4 1040 aa16.6■□□□□ 0.25
CAPN1-213ENST00000527897 ZNF667Q5HYK9 610 aa16.6■□□□□ 0.25
CAPN1-213ENST00000527897 LIMS2Q7Z4I7 341 aa16.6■□□□□ 0.25
CAPN1-213ENST00000527897 MFSD6LQ8IWD5 586 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms