RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 L1RE1Q9UN81 338 aa19.95■□□□□ 0.78
SMPD1-203ENST00000527275 PACSIN2Q9UNF0 486 aaPredicted RBP19.95■□□□□ 0.78
SMPD1-203ENST00000527275 NR2E3Q9Y5X4 410 aa19.95■□□□□ 0.78
SMPD1-203ENST00000527275 PTPRSQ13332 1948 aa19.95■□□□□ 0.78
SMPD1-203ENST00000527275 FAM170AA1A519 330 aa19.95■□□□□ 0.78
SMPD1-203ENST00000527275 NRP1O14786 923 aa19.95■□□□□ 0.78
SMPD1-203ENST00000527275 HUS1O60921 280 aa19.95■□□□□ 0.78
SMPD1-203ENST00000527275 RTN2O75298 545 aa19.95■□□□□ 0.78
SMPD1-203ENST00000527275 ALDH2P05091 517 aa19.95■□□□□ 0.78
SMPD1-203ENST00000527275 GZMAP12544 262 aa19.95■□□□□ 0.78
SMPD1-203ENST00000527275 FMO1Q01740 532 aa19.95■□□□□ 0.78
SMPD1-203ENST00000527275 CDR2Q01850 454 aa19.95■□□□□ 0.78
SMPD1-203ENST00000527275 MSANTD4Q8NCY6 345 aa19.95■□□□□ 0.78
SMPD1-203ENST00000527275 WHAMMQ8TF30 809 aa19.95■□□□□ 0.78
SMPD1-203ENST00000527275 HERVK_113Q902F9 699 aa19.95■□□□□ 0.78
SMPD1-203ENST00000527275 CILPO75339 1184 aa19.94■□□□□ 0.78
SMPD1-203ENST00000527275 GJB5O95377 273 aa19.94■□□□□ 0.78
SMPD1-203ENST00000527275 ZNF132P52740 706 aa19.94■□□□□ 0.78
SMPD1-203ENST00000527275 YWHAEP62258 255 aaKnown RBP19.94■□□□□ 0.78
SMPD1-203ENST00000527275 INCA1Q0VD86 236 aa19.94■□□□□ 0.78
SMPD1-203ENST00000527275 ORC1Q13415 861 aa19.94■□□□□ 0.78
SMPD1-203ENST00000527275 RPS6KA1Q15418 735 aa19.94■□□□□ 0.78
SMPD1-203ENST00000527275 CCDC181Q5TID7 509 aa19.94■□□□□ 0.78
SMPD1-203ENST00000527275 DSTYKQ6XUX3 929 aa19.94■□□□□ 0.78
SMPD1-203ENST00000527275 LIMS2Q7Z4I7 341 aa19.94■□□□□ 0.78
SMPD1-203ENST00000527275 SLFN11Q7Z7L1 901 aa19.94■□□□□ 0.78
SMPD1-203ENST00000527275 SYCE1Q8N0S2 351 aa19.94■□□□□ 0.78
SMPD1-203ENST00000527275 KBTBD7Q8WVZ9 684 aa19.94■□□□□ 0.78
SMPD1-203ENST00000527275 ARHGEF26Q96DR7 871 aa19.94■□□□□ 0.78
SMPD1-203ENST00000527275 TWNKQ96RR1 684 aa19.94■□□□□ 0.78
SMPD1-203ENST00000527275 OSGEPQ9NPF4 335 aa19.94■□□□□ 0.78
SMPD1-203ENST00000527275 BARX2Q9UMQ3 279 aaPredicted RBP19.94■□□□□ 0.78
SMPD1-203ENST00000527275 GALTP07902 379 aa19.94■□□□□ 0.78
SMPD1-203ENST00000527275 PAFAH1B1P43034 410 aa19.94■□□□□ 0.78
SMPD1-203ENST00000527275 SLC11A1P49279 550 aa19.94■□□□□ 0.78
SMPD1-203ENST00000527275 DNA2P51530 1060 aa19.94■□□□□ 0.78
SMPD1-203ENST00000527275 WSCD1Q658N2 575 aa19.94■□□□□ 0.78
SMPD1-203ENST00000527275 DPH6Q7L8W6 267 aa19.94■□□□□ 0.78
SMPD1-203ENST00000527275 ZNF572Q7Z3I7 529 aaPredicted RBP19.94■□□□□ 0.78
SMPD1-203ENST00000527275 TOP6BLQ8N6T0 577 aa19.94■□□□□ 0.78
SMPD1-203ENST00000527275 DDX1Q92499 740 aaKnown RBP19.94■□□□□ 0.78
SMPD1-203ENST00000527275 YME1L1Q96TA2 773 aa19.94■□□□□ 0.78
SMPD1-203ENST00000527275 GOLPH3Q9H4A6 298 aa19.94■□□□□ 0.78
SMPD1-203ENST00000527275 RNF14Q9UBS8 474 aa19.94■□□□□ 0.78
SMPD1-203ENST00000527275 TIMM13Q9Y5L4 95 aaPredicted RBP19.94■□□□□ 0.78
SMPD1-203ENST00000527275 NT5C1B-RDH14C9J2C7 533 aa19.93■□□□□ 0.78
SMPD1-203ENST00000527275 NDST1P52848 882 aa19.93■□□□□ 0.78
SMPD1-203ENST00000527275 BTG3Q14201 252 aaPredicted RBP19.93■□□□□ 0.78
SMPD1-203ENST00000527275 DAAM2Q86T65 1068 aa19.93■□□□□ 0.78
SMPD1-203ENST00000527275 CWH43Q9H720 699 aa19.93■□□□□ 0.78
SMPD1-203ENST00000527275 FAN1Q9Y2M0 1017 aa19.93■□□□□ 0.78
SMPD1-203ENST00000527275 NME7Q9Y5B8 376 aa19.93■□□□□ 0.78
SMPD1-203ENST00000527275 SLC4A7Q9Y6M7 1214 aa19.93■□□□□ 0.78
SMPD1-203ENST00000527275 TMEM189-UBE2V1I3L0A0 370 aa19.93■□□□□ 0.78
SMPD1-203ENST00000527275 HCRTO43612 131 aa19.93■□□□□ 0.78
SMPD1-203ENST00000527275 ALDH7A1P49419 539 aaKnown RBP19.93■□□□□ 0.78
SMPD1-203ENST00000527275 RAD23BP54727 409 aa19.93■□□□□ 0.78
SMPD1-203ENST00000527275 BCAR1P56945 870 aa19.93■□□□□ 0.78
SMPD1-203ENST00000527275 GPC5P78333 572 aa19.93■□□□□ 0.78
SMPD1-203ENST00000527275 PEX26Q7Z412 305 aa19.93■□□□□ 0.78
SMPD1-203ENST00000527275 ADGRF2Q8IZF7 708 aa19.93■□□□□ 0.78
SMPD1-203ENST00000527275 OR6B3Q8NGW1 331 aa19.93■□□□□ 0.78
SMPD1-203ENST00000527275 ELOVL4Q9GZR5 314 aa19.93■□□□□ 0.78
SMPD1-203ENST00000527275 FAM124BQ9H5Z6 455 aaPredicted RBP19.93■□□□□ 0.78
SMPD1-203ENST00000527275 TADA2AO75478 443 aa19.92■□□□□ 0.78
SMPD1-203ENST00000527275 LMO2P25791 158 aa19.92■□□□□ 0.78
SMPD1-203ENST00000527275 MAGEA10P43363 369 aaPredicted RBP19.92■□□□□ 0.78
SMPD1-203ENST00000527275 BPIFB4P59827 614 aa19.92■□□□□ 0.78
SMPD1-203ENST00000527275 ITIH3Q06033 890 aa19.92■□□□□ 0.78
SMPD1-203ENST00000527275 CFAP221Q4G0U5 840 aa19.92■□□□□ 0.78
SMPD1-203ENST00000527275 TMCO3Q6UWJ1 677 aa19.92■□□□□ 0.78
SMPD1-203ENST00000527275 TMEM173Q86WV6 379 aaPredicted RBP19.92■□□□□ 0.78
SMPD1-203ENST00000527275 RHOT2Q8IXI1 618 aa19.92■□□□□ 0.78
SMPD1-203ENST00000527275 MS4A14Q96JA4 679 aa19.92■□□□□ 0.78
SMPD1-203ENST00000527275 PNKPQ96T60 521 aa19.92■□□□□ 0.78
SMPD1-203ENST00000527275 TMEM175Q9BSA9 504 aa19.92■□□□□ 0.78
SMPD1-203ENST00000527275 ZBED2Q9BTP6 218 aa19.92■□□□□ 0.78
SMPD1-203ENST00000527275 RAB21Q9UL25 225 aa19.92■□□□□ 0.78
SMPD1-203ENST00000527275 M0QZQ0 153 aa19.91■□□□□ 0.78
SMPD1-203ENST00000527275 GNA15P30679 374 aa19.91■□□□□ 0.78
SMPD1-203ENST00000527275 GNL1P36915 607 aaPredicted RBP19.91■□□□□ 0.78
SMPD1-203ENST00000527275 C2orf54Q08AI8 447 aa19.91■□□□□ 0.78
SMPD1-203ENST00000527275 CMTR2Q8IYT2 770 aaKnown RBP19.91■□□□□ 0.78
SMPD1-203ENST00000527275 TTC39CQ8N584 583 aa19.91■□□□□ 0.78
SMPD1-203ENST00000527275 SPATA4Q8NEY3 305 aa19.91■□□□□ 0.78
SMPD1-203ENST00000527275 SUSD3Q96L08 255 aa19.91■□□□□ 0.78
SMPD1-203ENST00000527275 ZNF446Q9NWS9 450 aa19.91■□□□□ 0.78
SMPD1-203ENST00000527275 MARCH5Q9NX47 278 aa19.91■□□□□ 0.78
SMPD1-203ENST00000527275 SMARCAL1Q9NZC9 954 aa19.91■□□□□ 0.78
SMPD1-203ENST00000527275 EHD2Q9NZN4 543 aa19.91■□□□□ 0.78
SMPD1-203ENST00000527275 ADAM28Q9UKQ2 775 aa19.91■□□□□ 0.78
SMPD1-203ENST00000527275 A8MXQ7 604 aa19.91■□□□□ 0.78
SMPD1-203ENST00000527275 BUB1BO60566 1050 aaPredicted RBP19.91■□□□□ 0.78
SMPD1-203ENST00000527275 C9orf50Q5SZB4 431 aa19.91■□□□□ 0.78
SMPD1-203ENST00000527275 SLC4A11Q8NBS3 891 aa19.91■□□□□ 0.78
SMPD1-203ENST00000527275 TMEM176AQ96HP8 235 aa19.91■□□□□ 0.78
SMPD1-203ENST00000527275 COLEC11Q9BWP8 271 aa19.91■□□□□ 0.78
SMPD1-203ENST00000527275 NT5C1AQ9BXI3 368 aa19.91■□□□□ 0.78
SMPD1-203ENST00000527275 STXBP5LQ9Y2K9 1186 aa19.91■□□□□ 0.78
SMPD1-203ENST00000527275 MRPL42Q9Y6G3 142 aaKnown RBP19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms