RNA–Protein interactions for RNA: ENST00000527265.1

CLNS1A-208, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 620 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-208ENST00000527265 HNRNPA1P09651 372 aaKnown RBP eCLIP4.3□□□□□ -1.72
CLNS1A-208ENST00000527265 CST5P28325 142 aaPredicted RBP4.3□□□□□ -1.72
CLNS1A-208ENST00000527265 HOXD13P35453 343 aa4.3□□□□□ -1.72
CLNS1A-208ENST00000527265 PIK3CAP42336 1068 aa4.3□□□□□ -1.72
CLNS1A-208ENST00000527265 SNX16P57768 344 aa4.3□□□□□ -1.72
CLNS1A-208ENST00000527265 MAP3K12Q12852 859 aa4.3□□□□□ -1.72
CLNS1A-208ENST00000527265 PPP2R5CQ13362 524 aa4.3□□□□□ -1.72
CLNS1A-208ENST00000527265 SLC12A1Q13621 1099 aa4.3□□□□□ -1.72
CLNS1A-208ENST00000527265 BECN1Q14457 450 aa4.3□□□□□ -1.72
CLNS1A-208ENST00000527265 ARHGAP15Q53QZ3 475 aa4.3□□□□□ -1.72
CLNS1A-208ENST00000527265 PLBD1Q6P4A8 553 aa4.3□□□□□ -1.72
CLNS1A-208ENST00000527265 KANSL1Q7Z3B3 1105 aa4.3□□□□□ -1.72
CLNS1A-208ENST00000527265 VSIG1Q86XK7 387 aa4.3□□□□□ -1.72
CLNS1A-208ENST00000527265 RHOT1Q8IXI2 618 aa4.3□□□□□ -1.72
CLNS1A-208ENST00000527265 ARL10Q8N8L6 244 aa4.3□□□□□ -1.72
CLNS1A-208ENST00000527265 GLIS1Q8NBF1 620 aa4.3□□□□□ -1.72
CLNS1A-208ENST00000527265 GLB1L3Q8NCI6 653 aaPredicted RBP4.3□□□□□ -1.72
CLNS1A-208ENST00000527265 TTLL11Q8NHH1 800 aa4.3□□□□□ -1.72
CLNS1A-208ENST00000527265 CREB3L4Q8TEY5 395 aa4.3□□□□□ -1.72
CLNS1A-208ENST00000527265 AFG1LQ8WV93 481 aa4.3□□□□□ -1.72
CLNS1A-208ENST00000527265 IPCEF1Q8WWN9 437 aaPredicted RBP4.3□□□□□ -1.72
CLNS1A-208ENST00000527265 RSAD2Q8WXG1 361 aa4.3□□□□□ -1.72
CLNS1A-208ENST00000527265 THAP4Q8WY91 577 aa4.3□□□□□ -1.72
CLNS1A-208ENST00000527265 SH3KBP1Q96B97 665 aa4.3□□□□□ -1.72
CLNS1A-208ENST00000527265 NMD3Q96D46 503 aaKnown RBP4.3□□□□□ -1.72
CLNS1A-208ENST00000527265 EID2BQ96D98 161 aa4.3□□□□□ -1.72
CLNS1A-208ENST00000527265 CLPTM1LQ96KA5 538 aa4.3□□□□□ -1.72
CLNS1A-208ENST00000527265 COG8Q96MW5 612 aa4.3□□□□□ -1.72
CLNS1A-208ENST00000527265 GBP4Q96PP9 640 aa4.3□□□□□ -1.72
CLNS1A-208ENST00000527265 P2RX7Q99572 595 aaKnown RBP4.3□□□□□ -1.72
CLNS1A-208ENST00000527265 VRK1Q99986 396 aaPredicted RBP4.3□□□□□ -1.72
CLNS1A-208ENST00000527265 C7orf25Q9BPX7 421 aa4.3□□□□□ -1.72
CLNS1A-208ENST00000527265 ADPGKQ9BRR6 497 aa4.3□□□□□ -1.72
CLNS1A-208ENST00000527265 EIF2AQ9BY44 585 aaKnown RBP4.3□□□□□ -1.72
CLNS1A-208ENST00000527265 KIAA1683Q9H0B3 1180 aa4.3□□□□□ -1.72
CLNS1A-208ENST00000527265 SARS2Q9NP81 518 aaKnown RBP4.3□□□□□ -1.72
CLNS1A-208ENST00000527265 PPP4R1LQ9P1A2 415 aa4.3□□□□□ -1.72
CLNS1A-208ENST00000527265 FEZ2Q9UHY8 353 aaPredicted RBP4.3□□□□□ -1.72
CLNS1A-208ENST00000527265 PCDHA6Q9UN73 950 aa4.3□□□□□ -1.72
CLNS1A-208ENST00000527265 TESMINQ9Y4I5 508 aa4.3□□□□□ -1.72
CLNS1A-208ENST00000527265 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.29□□□□□ -1.72
CLNS1A-208ENST00000527265 TRIM43BA6NCK2 446 aa4.29□□□□□ -1.72
CLNS1A-208ENST00000527265 FAM171A2A8MVW0 826 aa4.29□□□□□ -1.72
CLNS1A-208ENST00000527265 C19orf81C9J6K1 198 aa4.29□□□□□ -1.72
CLNS1A-208ENST00000527265 PTP4A3O75365 173 aa4.29□□□□□ -1.72
CLNS1A-208ENST00000527265 TMEM63AO94886 807 aa4.29□□□□□ -1.72
CLNS1A-208ENST00000527265 HSPA4LO95757 839 aa4.29□□□□□ -1.72
CLNS1A-208ENST00000527265 MT-ND5P03915 603 aa4.29□□□□□ -1.72
CLNS1A-208ENST00000527265 ADRB2P07550 413 aa4.29□□□□□ -1.72
CLNS1A-208ENST00000527265 CHMP24386 653 aa4.29□□□□□ -1.72
CLNS1A-208ENST00000527265 THBS2P35442 1172 aa4.29□□□□□ -1.72
CLNS1A-208ENST00000527265 PNLIPRP1P54315 467 aa4.29□□□□□ -1.72
CLNS1A-208ENST00000527265 RNASE9P60153 205 aaKnown RBP4.29□□□□□ -1.72
CLNS1A-208ENST00000527265 ARF3P61204 181 aaPredicted RBP4.29□□□□□ -1.72
CLNS1A-208ENST00000527265 ARF1P84077 181 aaKnown RBP4.29□□□□□ -1.72
CLNS1A-208ENST00000527265 CDC42EP1Q00587 391 aa4.29□□□□□ -1.72
CLNS1A-208ENST00000527265 SLC6A3Q01959 620 aa4.29□□□□□ -1.72
CLNS1A-208ENST00000527265 CHRNDQ07001 517 aa4.29□□□□□ -1.72
CLNS1A-208ENST00000527265 DPTQ07507 201 aa4.29□□□□□ -1.72
CLNS1A-208ENST00000527265 HNRNPA0Q13151 305 aaKnown RBP4.29□□□□□ -1.72
CLNS1A-208ENST00000527265 CUL4BQ13620 913 aa4.29□□□□□ -1.72
CLNS1A-208ENST00000527265 NOMO1Q15155 1222 aa4.29□□□□□ -1.72
CLNS1A-208ENST00000527265 UBE3CQ15386 1083 aa4.29□□□□□ -1.72
CLNS1A-208ENST00000527265 KHDC1Q4VXA5 237 aaKnown RBP4.29□□□□□ -1.72
CLNS1A-208ENST00000527265 KHDC1LQ5JSQ8 128 aa4.29□□□□□ -1.72
CLNS1A-208ENST00000527265 RRAGBQ5VZM2 374 aa4.29□□□□□ -1.72
CLNS1A-208ENST00000527265 SLFN12LQ6IEE8 588 aa4.29□□□□□ -1.72
CLNS1A-208ENST00000527265 KLHL17Q6TDP4 642 aa4.29□□□□□ -1.72
CLNS1A-208ENST00000527265 GAREM2Q75VX8 874 aa4.29□□□□□ -1.72
CLNS1A-208ENST00000527265 CHD1LQ86WJ1 897 aa4.29□□□□□ -1.72
CLNS1A-208ENST00000527265 LINC00482Q8N8I6 264 aa4.29□□□□□ -1.72
CLNS1A-208ENST00000527265 HIPK4Q8NE63 616 aa4.29□□□□□ -1.72
CLNS1A-208ENST00000527265 DNERQ8NFT8 737 aa4.29□□□□□ -1.72
CLNS1A-208ENST00000527265 TRIM43Q96BQ3 446 aaPredicted RBP4.29□□□□□ -1.72
CLNS1A-208ENST00000527265 LRRC46Q96FV0 321 aa4.29□□□□□ -1.72
CLNS1A-208ENST00000527265 CRAMP1Q96RY5 1269 aa4.29□□□□□ -1.72
CLNS1A-208ENST00000527265 MYCBPQ99417 103 aaPredicted RBP4.29□□□□□ -1.72
CLNS1A-208ENST00000527265 MRPL9Q9BYD2 267 aaKnown RBP4.29□□□□□ -1.72
CLNS1A-208ENST00000527265 TRIM54Q9BYV2 358 aa4.29□□□□□ -1.72
CLNS1A-208ENST00000527265 GPR63Q9BZJ6 419 aa4.29□□□□□ -1.72
CLNS1A-208ENST00000527265 DBNDD1Q9H9R9 158 aa4.29□□□□□ -1.72
CLNS1A-208ENST00000527265 TMEM8AQ9HCN3 771 aa4.29□□□□□ -1.72
CLNS1A-208ENST00000527265 NECTIN3Q9NQS3 549 aa4.29□□□□□ -1.72
CLNS1A-208ENST00000527265 PIH1D1Q9NWS0 290 aaKnown RBP4.29□□□□□ -1.72
CLNS1A-208ENST00000527265 ADD3Q9UEY8 706 aaKnown RBP4.29□□□□□ -1.72
CLNS1A-208ENST00000527265 USP18Q9UMW8 372 aa4.29□□□□□ -1.72
CLNS1A-208ENST00000527265 CNPY2Q9Y2B0 182 aa4.29□□□□□ -1.72
CLNS1A-208ENST00000527265 ZNF711Q9Y462 761 aa4.29□□□□□ -1.72
CLNS1A-208ENST00000527265 PCDHA1Q9Y5I3 950 aa4.29□□□□□ -1.72
CLNS1A-208ENST00000527265 GOLGA6L22H0YM25 854 aa4.28□□□□□ -1.72
CLNS1A-208ENST00000527265 ITGA2BP08514 1039 aa4.28□□□□□ -1.72
CLNS1A-208ENST00000527265 PORP16435 677 aaPredicted RBP4.28□□□□□ -1.72
CLNS1A-208ENST00000527265 FAHP16930 419 aa4.28□□□□□ -1.72
CLNS1A-208ENST00000527265 IL11P20809 199 aa4.28□□□□□ -1.72
CLNS1A-208ENST00000527265 PSMA3P25788 255 aa4.28□□□□□ -1.72
CLNS1A-208ENST00000527265 GABRB3P28472 473 aa4.28□□□□□ -1.72
CLNS1A-208ENST00000527265 MCM7P33993 719 aa4.28□□□□□ -1.72
CLNS1A-208ENST00000527265 FLT3LGP49771 235 aa4.28□□□□□ -1.72
CLNS1A-208ENST00000527265 RGS3P49796 1198 aa4.28□□□□□ -1.72
CLNS1A-208ENST00000527265 MMP14P50281 582 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms