RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 CD58P19256 250 aa11.49□□□□□ -0.57
NEDD8-205ENST00000527046 CLCN1P35523 988 aa11.49□□□□□ -0.57
NEDD8-205ENST00000527046 CACNA2D1P54289 1103 aa11.49□□□□□ -0.57
NEDD8-205ENST00000527046 ARPP19P56211 112 aa11.49□□□□□ -0.57
NEDD8-205ENST00000527046 UBASH3AP57075 661 aa11.49□□□□□ -0.57
NEDD8-205ENST00000527046 JAM2P57087 298 aa11.49□□□□□ -0.57
NEDD8-205ENST00000527046 TPGS2Q68CL5 300 aa11.49□□□□□ -0.57
NEDD8-205ENST00000527046 SARM1Q6SZW1 724 aa11.49□□□□□ -0.57
NEDD8-205ENST00000527046 TCEAL8Q8IYN2 117 aa11.49□□□□□ -0.57
NEDD8-205ENST00000527046 FUKQ8N0W3 1084 aa11.49□□□□□ -0.57
NEDD8-205ENST00000527046 THEM5Q8N1Q8 247 aa11.49□□□□□ -0.57
NEDD8-205ENST00000527046 PPM1KQ8N3J5 372 aa11.49□□□□□ -0.57
NEDD8-205ENST00000527046 OLIG1Q8TAK6 271 aa11.49□□□□□ -0.57
NEDD8-205ENST00000527046 MYCBPAPQ8TBZ2 947 aa11.49□□□□□ -0.57
NEDD8-205ENST00000527046 TFAP2BQ92481 460 aa11.49□□□□□ -0.57
NEDD8-205ENST00000527046 PCED1BQ96HM7 432 aa11.49□□□□□ -0.57
NEDD8-205ENST00000527046 MSLNLQ96KJ4 702 aa11.49□□□□□ -0.57
NEDD8-205ENST00000527046 CDCA3Q99618 268 aaPredicted RBP11.49□□□□□ -0.57
NEDD8-205ENST00000527046 LSM14BQ9BX40 385 aaKnown RBP11.49□□□□□ -0.57
NEDD8-205ENST00000527046 IMPG2Q9BZV3 1241 aa11.49□□□□□ -0.57
NEDD8-205ENST00000527046 FAM124BQ9H5Z6 455 aaPredicted RBP11.49□□□□□ -0.57
NEDD8-205ENST00000527046 PRDM6Q9NQX0 595 aa11.49□□□□□ -0.57
NEDD8-205ENST00000527046 AFF4Q9UHB7 1163 aaKnown RBP11.49□□□□□ -0.57
NEDD8-205ENST00000527046 SLC27A5Q9Y2P5 690 aa11.49□□□□□ -0.57
NEDD8-205ENST00000527046 R3HCC1Q9Y3T6 440 aaKnown RBP11.49□□□□□ -0.57
NEDD8-205ENST00000527046 A0A1W2PQC6 194 aa11.48□□□□□ -0.57
NEDD8-205ENST00000527046 ARHGEF37A1IGU5 675 aa11.48□□□□□ -0.57
NEDD8-205ENST00000527046 GOLGA6L19H0YKK7 550 aa11.48□□□□□ -0.57
NEDD8-205ENST00000527046 CLDN5O00501 218 aa11.48□□□□□ -0.57
NEDD8-205ENST00000527046 NRG2O14511 850 aaPredicted RBP11.48□□□□□ -0.57
NEDD8-205ENST00000527046 RFPL2O75678 378 aa11.48□□□□□ -0.57
NEDD8-205ENST00000527046 SOAT2O75908 522 aa11.48□□□□□ -0.57
NEDD8-205ENST00000527046 BEST1O76090 585 aa11.48□□□□□ -0.57
NEDD8-205ENST00000527046 ADH1AP07327 375 aa11.48□□□□□ -0.57
NEDD8-205ENST00000527046 CFHP08603 1231 aa11.48□□□□□ -0.57
NEDD8-205ENST00000527046 TBXAS1P24557 533 aaPredicted RBP11.48□□□□□ -0.57
NEDD8-205ENST00000527046 CREMQ03060 361 aa11.48□□□□□ -0.57
NEDD8-205ENST00000527046 ADCY1Q08828 1119 aa11.48□□□□□ -0.57
NEDD8-205ENST00000527046 CETN1Q12798 172 aa11.48□□□□□ -0.57
NEDD8-205ENST00000527046 DUSP4Q13115 394 aa11.48□□□□□ -0.57
NEDD8-205ENST00000527046 SLC39A12Q504Y0 691 aa11.48□□□□□ -0.57
NEDD8-205ENST00000527046 ZNF394Q53GI3 561 aa11.48□□□□□ -0.57
NEDD8-205ENST00000527046 POTEHQ6S545 545 aa11.48□□□□□ -0.57
NEDD8-205ENST00000527046 C12orf76Q8N812 135 aaPredicted RBP11.48□□□□□ -0.57
NEDD8-205ENST00000527046 B3GALNT2Q8NCR0 500 aa11.48□□□□□ -0.57
NEDD8-205ENST00000527046 KREMEN2Q8NCW0 462 aa11.48□□□□□ -0.57
NEDD8-205ENST00000527046 ZMIZ2Q8NF64 920 aa11.48□□□□□ -0.57
NEDD8-205ENST00000527046 BAP1Q92560 729 aa11.48□□□□□ -0.57
NEDD8-205ENST00000527046 JAKMIP2Q96AA8 810 aa11.48□□□□□ -0.57
NEDD8-205ENST00000527046 ZNF707Q96C28 371 aaPredicted RBP11.48□□□□□ -0.57
NEDD8-205ENST00000527046 PABPC5Q96DU9 382 aaKnown RBP11.48□□□□□ -0.57
NEDD8-205ENST00000527046 TMEM176AQ96HP8 235 aa11.48□□□□□ -0.57
NEDD8-205ENST00000527046 PGLYRP2Q96PD5 576 aa11.48□□□□□ -0.57
NEDD8-205ENST00000527046 LRRC3Q9BY71 257 aa11.48□□□□□ -0.57
NEDD8-205ENST00000527046 SNX25Q9H3E2 840 aa11.48□□□□□ -0.57
NEDD8-205ENST00000527046 FAM207AQ9NSI2 230 aaPredicted RBP11.48□□□□□ -0.57
NEDD8-205ENST00000527046 CDH22Q9UJ99 828 aa11.48□□□□□ -0.57
NEDD8-205ENST00000527046 GREB1Q4ZG55 1949 aa11.47□□□□□ -0.57
NEDD8-205ENST00000527046 PES1O00541 588 aaKnown RBP11.47□□□□□ -0.57
NEDD8-205ENST00000527046 ZMYND10O75800 440 aa11.47□□□□□ -0.57
NEDD8-205ENST00000527046 GABBR2O75899 941 aa11.47□□□□□ -0.57
NEDD8-205ENST00000527046 GLUD1P00367 558 aa11.47□□□□□ -0.57
NEDD8-205ENST00000527046 SERPINC1P01008 464 aa11.47□□□□□ -0.57
NEDD8-205ENST00000527046 HAPLN1P10915 354 aaPredicted RBP11.47□□□□□ -0.57
NEDD8-205ENST00000527046 P4HA1P13674 534 aa11.47□□□□□ -0.57
NEDD8-205ENST00000527046 ATF6P18850 670 aa11.47□□□□□ -0.57
NEDD8-205ENST00000527046 CYP2F1P24903 491 aa11.47□□□□□ -0.57
NEDD8-205ENST00000527046 PCSK1P29120 753 aa11.47□□□□□ -0.57
NEDD8-205ENST00000527046 GPR15P49685 360 aa11.47□□□□□ -0.57
NEDD8-205ENST00000527046 DRAP1Q14919 205 aaPredicted RBP11.47□□□□□ -0.57
NEDD8-205ENST00000527046 ARHGAP44Q17R89 818 aa11.47□□□□□ -0.57
NEDD8-205ENST00000527046 CFAP221Q4G0U5 840 aa11.47□□□□□ -0.57
NEDD8-205ENST00000527046 PKDCCQ504Y2 493 aa11.47□□□□□ -0.57
NEDD8-205ENST00000527046 MDH1BQ5I0G3 518 aa11.47□□□□□ -0.57
NEDD8-205ENST00000527046 PPP1R26Q5T8A7 1209 aaPredicted RBP11.47□□□□□ -0.57
NEDD8-205ENST00000527046 ANKRD54Q6NXT1 300 aa11.47□□□□□ -0.57
NEDD8-205ENST00000527046 LLGL2Q6P1M3 1020 aa11.47□□□□□ -0.57
NEDD8-205ENST00000527046 TMEM270Q6UE05 265 aa11.47□□□□□ -0.57
NEDD8-205ENST00000527046 PPFIBP1Q86W92 1011 aa11.47□□□□□ -0.57
NEDD8-205ENST00000527046 FAM71AQ8IYT1 594 aa11.47□□□□□ -0.57
NEDD8-205ENST00000527046 CCDC150Q8NCX0 1101 aa11.47□□□□□ -0.57
NEDD8-205ENST00000527046 ANKRD20A12PQ8NF67 263 aa11.47□□□□□ -0.57
NEDD8-205ENST00000527046 HDAC7Q8WUI4 952 aa11.47□□□□□ -0.57
NEDD8-205ENST00000527046 MYLPFQ96A32 169 aa11.47□□□□□ -0.57
NEDD8-205ENST00000527046 HNRNPABQ99729 332 aaKnown RBP11.47□□□□□ -0.57
NEDD8-205ENST00000527046 NT5C1AQ9BXI3 368 aa11.47□□□□□ -0.57
NEDD8-205ENST00000527046 STK33Q9BYT3 514 aa11.47□□□□□ -0.57
NEDD8-205ENST00000527046 ZNF518BQ9C0D4 1074 aa11.47□□□□□ -0.57
NEDD8-205ENST00000527046 MAN1C1Q9NR34 630 aa11.47□□□□□ -0.57
NEDD8-205ENST00000527046 HSFX1Q9UBD0 423 aa11.47□□□□□ -0.57
NEDD8-205ENST00000527046 PCDHB4Q9Y5E5 795 aa11.47□□□□□ -0.57
NEDD8-205ENST00000527046 BRWD1Q9NSI6 2320 aa11.47□□□□□ -0.57
NEDD8-205ENST00000527046 C2orf16Q68DN1 1984 aa11.47□□□□□ -0.57
NEDD8-205ENST00000527046 HHLA1C9JL84 531 aa11.46□□□□□ -0.57
NEDD8-205ENST00000527046 CCDC130P13994 396 aa11.46□□□□□ -0.57
NEDD8-205ENST00000527046 CPB1P15086 417 aa11.46□□□□□ -0.57
NEDD8-205ENST00000527046 BDNFP23560 247 aa11.46□□□□□ -0.57
NEDD8-205ENST00000527046 CA8P35219 290 aa11.46□□□□□ -0.57
NEDD8-205ENST00000527046 MFAP3P55082 362 aa11.46□□□□□ -0.57
NEDD8-205ENST00000527046 POLR2FP61218 127 aaKnown RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms