RNA–Protein interactions for RNA: ENST00000526877.1

SSSCA1-203, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-203ENST00000526877 FAXDC2Q96IV6 333 aa13.56□□□□□ -0.24
SSSCA1-203ENST00000526877 NECTIN4Q96NY8 510 aa13.56□□□□□ -0.24
SSSCA1-203ENST00000526877 PPP1R10Q96QC0 940 aaKnown RBP13.56□□□□□ -0.24
SSSCA1-203ENST00000526877 KCNF1Q9H3M0 494 aa13.56□□□□□ -0.24
SSSCA1-203ENST00000526877 AIPL1Q9NZN9 384 aa13.56□□□□□ -0.24
SSSCA1-203ENST00000526877 SIX4Q9UIU6 781 aa13.56□□□□□ -0.24
SSSCA1-203ENST00000526877 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.56□□□□□ -0.24
SSSCA1-203ENST00000526877 VWA8A3KMH1 1905 aa13.56□□□□□ -0.24
SSSCA1-203ENST00000526877 ZNF318Q5VUA4 2279 aa13.56□□□□□ -0.24
SSSCA1-203ENST00000526877 DENND4AQ7Z401 1863 aa13.55□□□□□ -0.24
SSSCA1-203ENST00000526877 CASTOR2A6NHX0 329 aa13.55□□□□□ -0.24
SSSCA1-203ENST00000526877 ARHGAP6O43182 974 aa13.55□□□□□ -0.24
SSSCA1-203ENST00000526877 TADA2AO75478 443 aa13.55□□□□□ -0.24
SSSCA1-203ENST00000526877 KIF4AO95239 1232 aa13.55□□□□□ -0.24
SSSCA1-203ENST00000526877 PAPLNO95428 1278 aa13.55□□□□□ -0.24
SSSCA1-203ENST00000526877 STAU1O95793 577 aaKnown RBP13.55□□□□□ -0.24
SSSCA1-203ENST00000526877 C1RP00736 705 aa13.55□□□□□ -0.24
SSSCA1-203ENST00000526877 SOX5P35711 763 aa13.55□□□□□ -0.24
SSSCA1-203ENST00000526877 GUCY2FP51841 1108 aa13.55□□□□□ -0.24
SSSCA1-203ENST00000526877 CCZ1BP86790 482 aa13.55□□□□□ -0.24
SSSCA1-203ENST00000526877 CCZ1P86791 482 aaPredicted RBP13.55□□□□□ -0.24
SSSCA1-203ENST00000526877 ZXDAP98168 799 aa13.55□□□□□ -0.24
SSSCA1-203ENST00000526877 CDK17Q00537 523 aa13.55□□□□□ -0.24
SSSCA1-203ENST00000526877 MEA1Q16626 185 aa13.55□□□□□ -0.24
SSSCA1-203ENST00000526877 USP41Q3LFD5 358 aa13.55□□□□□ -0.24
SSSCA1-203ENST00000526877 ATAT1Q5SQI0 421 aa13.55□□□□□ -0.24
SSSCA1-203ENST00000526877 SMYD5Q6GMV2 418 aa13.55□□□□□ -0.24
SSSCA1-203ENST00000526877 SPOPLQ6IQ16 392 aa13.55□□□□□ -0.24
SSSCA1-203ENST00000526877 LILRA6Q6PI73 481 aa13.55□□□□□ -0.24
SSSCA1-203ENST00000526877 TMC5Q6UXY8 1006 aa13.55□□□□□ -0.24
SSSCA1-203ENST00000526877 GPR149Q86SP6 731 aa13.55□□□□□ -0.24
SSSCA1-203ENST00000526877 C18orf25Q96B23 403 aaPredicted RBP13.55□□□□□ -0.24
SSSCA1-203ENST00000526877 HPDLQ96IR7 371 aa13.55□□□□□ -0.24
SSSCA1-203ENST00000526877 RIPOR3Q96MK2 946 aa13.55□□□□□ -0.24
SSSCA1-203ENST00000526877 NIF3L1Q9GZT8 377 aa13.55□□□□□ -0.24
SSSCA1-203ENST00000526877 FNIP2Q9P278 1114 aa13.55□□□□□ -0.24
SSSCA1-203ENST00000526877 TUBGCP4Q9UGJ1 667 aa13.55□□□□□ -0.24
SSSCA1-203ENST00000526877 AJAP1Q9UKB5 411 aaPredicted RBP13.55□□□□□ -0.24
SSSCA1-203ENST00000526877 BZW2Q9Y6E2 419 aaKnown RBP13.55□□□□□ -0.24
SSSCA1-203ENST00000526877 MUC6Q6W4X9 2439 aa13.54□□□□□ -0.24
SSSCA1-203ENST00000526877 DOCK6Q96HP0 2047 aa13.54□□□□□ -0.24
SSSCA1-203ENST00000526877 C2CD4DB7Z1M9 353 aa13.54□□□□□ -0.24
SSSCA1-203ENST00000526877 F8VZ95 297 aa13.54□□□□□ -0.24
SSSCA1-203ENST00000526877 SERPING1P05155 500 aa13.54□□□□□ -0.24
SSSCA1-203ENST00000526877 ADH1AP07327 375 aa13.54□□□□□ -0.24
SSSCA1-203ENST00000526877 FECHP22830 423 aa13.54□□□□□ -0.24
SSSCA1-203ENST00000526877 PNPLA4P41247 253 aa13.54□□□□□ -0.24
SSSCA1-203ENST00000526877 YWHAEP62258 255 aaKnown RBP13.54□□□□□ -0.24
SSSCA1-203ENST00000526877 CUL2Q13617 745 aa13.54□□□□□ -0.24
SSSCA1-203ENST00000526877 RTP2Q5QGT7 225 aa13.54□□□□□ -0.24
SSSCA1-203ENST00000526877 C9orf57Q5W0N0 161 aa13.54□□□□□ -0.24
SSSCA1-203ENST00000526877 LRRC52Q8N7C0 313 aa13.54□□□□□ -0.24
SSSCA1-203ENST00000526877 CMASQ8NFW8 434 aaPredicted RBP13.54□□□□□ -0.24
SSSCA1-203ENST00000526877 RIN2Q8WYP3 895 aaPredicted RBP13.54□□□□□ -0.24
SSSCA1-203ENST00000526877 ZNF560Q96MR9 790 aa13.54□□□□□ -0.24
SSSCA1-203ENST00000526877 KREMEN1Q96MU8 473 aa13.54□□□□□ -0.24
SSSCA1-203ENST00000526877 XYLT2Q9H1B5 865 aa13.54□□□□□ -0.24
SSSCA1-203ENST00000526877 VRTNQ9H8Y1 702 aa13.54□□□□□ -0.24
SSSCA1-203ENST00000526877 SFXN1Q9H9B4 322 aa13.54□□□□□ -0.24
SSSCA1-203ENST00000526877 APOBEC3GQ9HC16 384 aaKnown RBP13.54□□□□□ -0.24
SSSCA1-203ENST00000526877 ARIH1Q9Y4X5 557 aaPredicted RBP13.54□□□□□ -0.24
SSSCA1-203ENST00000526877 NUB1Q9Y5A7 615 aa13.54□□□□□ -0.24
SSSCA1-203ENST00000526877 SCN1AP35498 2009 aa13.54□□□□□ -0.24
SSSCA1-203ENST00000526877 ZDBF2Q9HCK1 2354 aa13.53□□□□□ -0.24
SSSCA1-203ENST00000526877 ANO9A1A5B4 782 aa13.53□□□□□ -0.24
SSSCA1-203ENST00000526877 TMEM189-UBE2V1I3L0A0 370 aa13.53□□□□□ -0.24
SSSCA1-203ENST00000526877 FOXN3O00409 490 aaPredicted RBP13.53□□□□□ -0.24
SSSCA1-203ENST00000526877 GFPT2O94808 682 aa13.53□□□□□ -0.24
SSSCA1-203ENST00000526877 RPL17P18621 184 aaKnown RBP13.53□□□□□ -0.24
SSSCA1-203ENST00000526877 SP100P23497 879 aaPredicted RBP13.53□□□□□ -0.24
SSSCA1-203ENST00000526877 LRPAP1P30533 357 aa13.53□□□□□ -0.24
SSSCA1-203ENST00000526877 RPL9P32969 192 aaKnown RBP13.53□□□□□ -0.24
SSSCA1-203ENST00000526877 CYLC1P35663 651 aaPredicted RBP13.53□□□□□ -0.24
SSSCA1-203ENST00000526877 USP8P40818 1118 aa13.53□□□□□ -0.24
SSSCA1-203ENST00000526877 TNNC1P63316 161 aa13.53□□□□□ -0.24
SSSCA1-203ENST00000526877 ARID5AQ03989 594 aa13.53□□□□□ -0.24
SSSCA1-203ENST00000526877 SOX4Q06945 474 aaPredicted RBP13.53□□□□□ -0.24
SSSCA1-203ENST00000526877 KLHL30Q0D2K2 578 aa13.53□□□□□ -0.24
SSSCA1-203ENST00000526877 WDR72Q3MJ13 1102 aa13.53□□□□□ -0.24
SSSCA1-203ENST00000526877 TDRD12Q587J7 1177 aaKnown RBP13.53□□□□□ -0.24
SSSCA1-203ENST00000526877 WDR59Q6PJI9 974 aa13.53□□□□□ -0.24
SSSCA1-203ENST00000526877 DCLRE1AQ6PJP8 1040 aa13.53□□□□□ -0.24
SSSCA1-203ENST00000526877 PRSS55Q6UWB4 352 aaPredicted RBP13.53□□□□□ -0.24
SSSCA1-203ENST00000526877 TRIM67Q6ZTA4 783 aa13.53□□□□□ -0.24
SSSCA1-203ENST00000526877 HFE2Q6ZVN8 426 aa13.53□□□□□ -0.24
SSSCA1-203ENST00000526877 BMP8AQ7Z5Y6 402 aa13.53□□□□□ -0.24
SSSCA1-203ENST00000526877 PALB2Q86YC2 1186 aa13.53□□□□□ -0.24
SSSCA1-203ENST00000526877 TMEM139Q8IV31 216 aa13.53□□□□□ -0.24
SSSCA1-203ENST00000526877 CXorf38Q8TB03 319 aa13.53□□□□□ -0.24
SSSCA1-203ENST00000526877 LNX1Q8TBB1 728 aaPredicted RBP13.53□□□□□ -0.24
SSSCA1-203ENST00000526877 HASPINQ8TF76 798 aa13.53□□□□□ -0.24
SSSCA1-203ENST00000526877 HDAC7Q8WUI4 952 aa13.53□□□□□ -0.24
SSSCA1-203ENST00000526877 SHC3Q92529 594 aa13.53□□□□□ -0.24
SSSCA1-203ENST00000526877 KAT5Q92993 513 aa13.53□□□□□ -0.24
SSSCA1-203ENST00000526877 ELMO3Q96BJ8 720 aa13.53□□□□□ -0.24
SSSCA1-203ENST00000526877 DDX27Q96GQ7 796 aaKnown RBP13.53□□□□□ -0.24
SSSCA1-203ENST00000526877 CLSTN3Q9BQT9 956 aa13.53□□□□□ -0.24
SSSCA1-203ENST00000526877 RHOBTB2Q9BYZ6 727 aa13.53□□□□□ -0.24
SSSCA1-203ENST00000526877 MAN1C1Q9NR34 630 aa13.53□□□□□ -0.24
SSSCA1-203ENST00000526877 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms