RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 BMT2Q1RMZ1 405 aa11.84□□□□□ -0.51
NEDD8-204ENST00000526430 L1TD1Q5T7N2 865 aaKnown RBP11.84□□□□□ -0.51
NEDD8-204ENST00000526430 RALGPS2Q86X27 583 aaPredicted RBP11.84□□□□□ -0.51
NEDD8-204ENST00000526430 HACE1Q8IYU2 909 aa11.84□□□□□ -0.51
NEDD8-204ENST00000526430 ADAM32Q8TC27 787 aa11.84□□□□□ -0.51
NEDD8-204ENST00000526430 CSGALNACT1Q8TDX6 532 aa11.84□□□□□ -0.51
NEDD8-204ENST00000526430 BBC3Q96PG8 261 aaPredicted RBP11.84□□□□□ -0.51
NEDD8-204ENST00000526430 GSDMAQ96QA5 445 aa11.84□□□□□ -0.51
NEDD8-204ENST00000526430 DUSP15Q9H1R2 295 aaPredicted RBP11.84□□□□□ -0.51
NEDD8-204ENST00000526430 MRPL44Q9H9J2 332 aaKnown RBP11.84□□□□□ -0.51
NEDD8-204ENST00000526430 TMEM9BQ9NQ34 198 aa11.84□□□□□ -0.51
NEDD8-204ENST00000526430 TMEM63CQ9P1W3 806 aa11.84□□□□□ -0.51
NEDD8-204ENST00000526430 MTRRQ9UBK8 725 aa11.84□□□□□ -0.51
NEDD8-204ENST00000526430 KLK13Q9UKR3 277 aa11.84□□□□□ -0.51
NEDD8-204ENST00000526430 HES2Q9Y543 173 aa11.84□□□□□ -0.51
NEDD8-204ENST00000526430 ADAMTS9Q9P2N4 1935 aa11.84□□□□□ -0.51
NEDD8-204ENST00000526430 CHADO15335 359 aa11.83□□□□□ -0.52
NEDD8-204ENST00000526430 ERLIN2O94905 339 aa11.83□□□□□ -0.52
NEDD8-204ENST00000526430 KIF4AO95239 1232 aa11.83□□□□□ -0.52
NEDD8-204ENST00000526430 CAVIN2O95810 425 aa11.83□□□□□ -0.52
NEDD8-204ENST00000526430 HOXC13P31276 330 aa11.83□□□□□ -0.52
NEDD8-204ENST00000526430 CTHP32929 405 aa11.83□□□□□ -0.52
NEDD8-204ENST00000526430 PSMD2Q13200 908 aa11.83□□□□□ -0.52
NEDD8-204ENST00000526430 TUSC3Q13454 348 aa11.83□□□□□ -0.52
NEDD8-204ENST00000526430 PRPF4BQ13523 1007 aaKnown RBP11.83□□□□□ -0.52
NEDD8-204ENST00000526430 MORC3Q14149 939 aa11.83□□□□□ -0.52
NEDD8-204ENST00000526430 ELF2Q15723 593 aa11.83□□□□□ -0.52
NEDD8-204ENST00000526430 COL28A1Q2UY09 1125 aa11.83□□□□□ -0.52
NEDD8-204ENST00000526430 ATF7IP2Q5U623 682 aa11.83□□□□□ -0.52
NEDD8-204ENST00000526430 ISM2Q6H9L7 571 aa11.83□□□□□ -0.52
NEDD8-204ENST00000526430 ZPBP2Q6X784 338 aa11.83□□□□□ -0.52
NEDD8-204ENST00000526430 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.83□□□□□ -0.52
NEDD8-204ENST00000526430 CEP57Q86XR8 500 aa11.83□□□□□ -0.52
NEDD8-204ENST00000526430 SMYD4Q8IYR2 804 aaPredicted RBP11.83□□□□□ -0.52
NEDD8-204ENST00000526430 CEP120Q8N960 986 aa11.83□□□□□ -0.52
NEDD8-204ENST00000526430 E2F7Q96AV8 911 aa11.83□□□□□ -0.52
NEDD8-204ENST00000526430 MED15Q96RN5 788 aa11.83□□□□□ -0.52
NEDD8-204ENST00000526430 PAAF1Q9BRP4 392 aa11.83□□□□□ -0.52
NEDD8-204ENST00000526430 KCTD10Q9H3F6 313 aa11.83□□□□□ -0.52
NEDD8-204ENST00000526430 KIAA1468Q9P260 1216 aa11.83□□□□□ -0.52
NEDD8-204ENST00000526430 NCANO14594 1321 aa11.83□□□□□ -0.52
NEDD8-204ENST00000526430 URB1O60287 2271 aaKnown RBP11.83□□□□□ -0.52
NEDD8-204ENST00000526430 MYO18BQ8IUG5 2567 aa11.82□□□□□ -0.52
NEDD8-204ENST00000526430 CFAP46Q8IYW2 2715 aa11.82□□□□□ -0.52
NEDD8-204ENST00000526430 A0A0B4J269 797 aa11.82□□□□□ -0.52
NEDD8-204ENST00000526430 EIF4E1BA6NMX2 242 aaKnown RBP11.82□□□□□ -0.52
NEDD8-204ENST00000526430 PPP1R3GB7ZBB8 358 aa11.82□□□□□ -0.52
NEDD8-204ENST00000526430 SPECC1L-ADORA2AF8WAN1 911 aa11.82□□□□□ -0.52
NEDD8-204ENST00000526430 H0Y626 953 aa11.82□□□□□ -0.52
NEDD8-204ENST00000526430 CDX4O14627 284 aaPredicted RBP11.82□□□□□ -0.52
NEDD8-204ENST00000526430 EIF3DO15371 548 aaKnown RBP eCLIP11.82□□□□□ -0.52
NEDD8-204ENST00000526430 EXTL3O43909 919 aa11.82□□□□□ -0.52
NEDD8-204ENST00000526430 RHOBTB1O94844 696 aa11.82□□□□□ -0.52
NEDD8-204ENST00000526430 TRIM16O95361 564 aa11.82□□□□□ -0.52
NEDD8-204ENST00000526430 GCNT3O95395 438 aa11.82□□□□□ -0.52
NEDD8-204ENST00000526430 FCHO2Q0JRZ9 810 aa11.82□□□□□ -0.52
NEDD8-204ENST00000526430 NFKBIBQ15653 356 aa11.82□□□□□ -0.52
NEDD8-204ENST00000526430 COBLL1Q53SF7 1204 aa11.82□□□□□ -0.52
NEDD8-204ENST00000526430 ZNF658Q5TYW1 1059 aaPredicted RBP11.82□□□□□ -0.52
NEDD8-204ENST00000526430 KIAA1211LQ6NV74 962 aa11.82□□□□□ -0.52
NEDD8-204ENST00000526430 TXNDC11Q6PKC3 985 aa11.82□□□□□ -0.52
NEDD8-204ENST00000526430 C19orf48Q6RUI8 117 aa11.82□□□□□ -0.52
NEDD8-204ENST00000526430 CRELD2Q6UXH1 353 aaPredicted RBP11.82□□□□□ -0.52
NEDD8-204ENST00000526430 CAMKK1Q8N5S9 505 aa11.82□□□□□ -0.52
NEDD8-204ENST00000526430 RABGGTAQ92696 567 aa11.82□□□□□ -0.52
NEDD8-204ENST00000526430 HVCN1Q96D96 273 aa11.82□□□□□ -0.52
NEDD8-204ENST00000526430 TCEAL4Q96EI5 215 aa11.82□□□□□ -0.52
NEDD8-204ENST00000526430 MRPL4Q9BYD3 311 aaKnown RBP11.82□□□□□ -0.52
NEDD8-204ENST00000526430 CDT1Q9H211 546 aa11.82□□□□□ -0.52
NEDD8-204ENST00000526430 NXF3Q9H4D5 531 aaKnown RBP11.82□□□□□ -0.52
NEDD8-204ENST00000526430 MAPK8IP1Q9UQF2 711 aa11.82□□□□□ -0.52
NEDD8-204ENST00000526430 PCDHB13Q9Y5F0 798 aa11.82□□□□□ -0.52
NEDD8-204ENST00000526430 BACE2Q9Y5Z0 518 aa11.82□□□□□ -0.52
NEDD8-204ENST00000526430 GON4LQ3T8J9 2241 aa11.82□□□□□ -0.52
NEDD8-204ENST00000526430 SLC38A8A6NNN8 435 aa11.81□□□□□ -0.52
NEDD8-204ENST00000526430 H0YCG3 227 aa11.81□□□□□ -0.52
NEDD8-204ENST00000526430 GOLGA6L22H0YM25 854 aa11.81□□□□□ -0.52
NEDD8-204ENST00000526430 TOM1L1O75674 476 aa11.81□□□□□ -0.52
NEDD8-204ENST00000526430 NPTXRO95502 500 aa11.81□□□□□ -0.52
NEDD8-204ENST00000526430 LRG1P02750 347 aa11.81□□□□□ -0.52
NEDD8-204ENST00000526430 SCP2P22307 547 aa11.81□□□□□ -0.52
NEDD8-204ENST00000526430 FGFR3P22607 806 aa11.81□□□□□ -0.52
NEDD8-204ENST00000526430 VIPR2P41587 438 aa11.81□□□□□ -0.52
NEDD8-204ENST00000526430 CCR2P41597 374 aa11.81□□□□□ -0.52
NEDD8-204ENST00000526430 PRCPP42785 496 aa11.81□□□□□ -0.52
NEDD8-204ENST00000526430 KPNA1P52294 538 aaPredicted RBP11.81□□□□□ -0.52
NEDD8-204ENST00000526430 PMS1P54277 932 aaKnown RBP11.81□□□□□ -0.52
NEDD8-204ENST00000526430 CREB5Q02930 508 aa11.81□□□□□ -0.52
NEDD8-204ENST00000526430 MCL1Q07820 350 aa11.81□□□□□ -0.52
NEDD8-204ENST00000526430 ZCWPW2Q504Y3 356 aa11.81□□□□□ -0.52
NEDD8-204ENST00000526430 SEZ6Q53EL9 994 aa11.81□□□□□ -0.52
NEDD8-204ENST00000526430 SLC27A1Q6PCB7 646 aa11.81□□□□□ -0.52
NEDD8-204ENST00000526430 ALKAL1Q6UXT8 129 aa11.81□□□□□ -0.52
NEDD8-204ENST00000526430 PDZD4Q76G19 769 aaPredicted RBP11.81□□□□□ -0.52
NEDD8-204ENST00000526430 DEFB124Q8NES8 71 aa11.81□□□□□ -0.52
NEDD8-204ENST00000526430 HASPINQ8TF76 798 aa11.81□□□□□ -0.52
NEDD8-204ENST00000526430 SMARCE1Q969G3 411 aa11.81□□□□□ -0.52
NEDD8-204ENST00000526430 ZSWIM3Q96MP5 696 aa11.81□□□□□ -0.52
NEDD8-204ENST00000526430 ACCSQ96QU6 501 aa11.81□□□□□ -0.52
NEDD8-204ENST00000526430 CORO1BQ9BR76 489 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms