RNA–Protein interactions for RNA: ENST00000526150.1

COLCA1-202, Transcript of colorectal cancer associated 1, humanhuman

TSL 2

Gene COLCA1, Length 391 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-202ENST00000526150 LHX1P48742 406 aa13.12□□□□□ -0.31
COLCA1-202ENST00000526150 NLRP12P59046 1061 aa13.12□□□□□ -0.31
COLCA1-202ENST00000526150 TFAMQ00059 246 aaKnown RBP13.12□□□□□ -0.31
COLCA1-202ENST00000526150 NR1H3Q13133 447 aa13.12□□□□□ -0.31
COLCA1-202ENST00000526150 ZNF268Q14587 947 aaPredicted RBP13.12□□□□□ -0.31
COLCA1-202ENST00000526150 PDGFRLQ15198 375 aa13.12□□□□□ -0.31
COLCA1-202ENST00000526150 TMEM196Q5HYL7 178 aa13.12□□□□□ -0.31
COLCA1-202ENST00000526150 RRAGBQ5VZM2 374 aa13.12□□□□□ -0.31
COLCA1-202ENST00000526150 IL31Q6EBC2 164 aa13.12□□□□□ -0.31
COLCA1-202ENST00000526150 Q6ZS52 159 aa13.12□□□□□ -0.31
COLCA1-202ENST00000526150 DYMQ7RTS9 669 aa13.12□□□□□ -0.31
COLCA1-202ENST00000526150 CACNA2D4Q7Z3S7 1137 aa13.12□□□□□ -0.31
COLCA1-202ENST00000526150 MON1AQ86VX9 555 aa13.12□□□□□ -0.31
COLCA1-202ENST00000526150 SFR1Q86XK3 245 aa13.12□□□□□ -0.31
COLCA1-202ENST00000526150 SYCP3Q8IZU3 236 aa13.12□□□□□ -0.31
COLCA1-202ENST00000526150 CAMKK1Q8N5S9 505 aa13.12□□□□□ -0.31
COLCA1-202ENST00000526150 LRRC52Q8N7C0 313 aa13.12□□□□□ -0.31
COLCA1-202ENST00000526150 MAB21L3Q8N8X9 362 aa13.12□□□□□ -0.31
COLCA1-202ENST00000526150 FSIP1Q8NA03 581 aa13.12□□□□□ -0.31
COLCA1-202ENST00000526150 LRRC3BQ96PB8 259 aa13.12□□□□□ -0.31
COLCA1-202ENST00000526150 FAM83CQ9BQN1 747 aa13.12□□□□□ -0.31
COLCA1-202ENST00000526150 MAGED2Q9UNF1 606 aaPredicted RBP13.12□□□□□ -0.31
COLCA1-202ENST00000526150 TPRP12270 2363 aaKnown RBP13.12□□□□□ -0.31
COLCA1-202ENST00000526150 TSC2P49815 1807 aa13.11□□□□□ -0.31
COLCA1-202ENST00000526150 KIAA0391O15091 583 aaKnown RBP13.11□□□□□ -0.31
COLCA1-202ENST00000526150 RPP40O75818 363 aaKnown RBP13.11□□□□□ -0.31
COLCA1-202ENST00000526150 AKAP3O75969 853 aa13.11□□□□□ -0.31
COLCA1-202ENST00000526150 F11P03951 625 aa13.11□□□□□ -0.31
COLCA1-202ENST00000526150 ADRB1P08588 477 aa13.11□□□□□ -0.31
COLCA1-202ENST00000526150 CCDC192P0DO97 292 aa13.11□□□□□ -0.31
COLCA1-202ENST00000526150 PCSK1P29120 753 aa13.11□□□□□ -0.31
COLCA1-202ENST00000526150 PDE6CP51160 858 aa13.11□□□□□ -0.31
COLCA1-202ENST00000526150 TNK2Q07912 1038 aa13.11□□□□□ -0.31
COLCA1-202ENST00000526150 L1TD1Q5T7N2 865 aaKnown RBP13.11□□□□□ -0.31
COLCA1-202ENST00000526150 STXBP4Q6ZWJ1 553 aa13.11□□□□□ -0.31
COLCA1-202ENST00000526150 LRRTM3Q86VH5 581 aa13.11□□□□□ -0.31
COLCA1-202ENST00000526150 BRSK2Q8IWQ3 736 aa13.11□□□□□ -0.31
COLCA1-202ENST00000526150 CPA6Q8N4T0 437 aa13.11□□□□□ -0.31
COLCA1-202ENST00000526150 FAM160A2Q8N612 972 aaPredicted RBP13.11□□□□□ -0.31
COLCA1-202ENST00000526150 C12orf50Q8NA57 414 aaPredicted RBP13.11□□□□□ -0.31
COLCA1-202ENST00000526150 GAB3Q8WWW8 586 aa13.11□□□□□ -0.31
COLCA1-202ENST00000526150 TRMT2BQ96GJ1 504 aaKnown RBP13.11□□□□□ -0.31
COLCA1-202ENST00000526150 FAM213AQ9BRX8 229 aa13.11□□□□□ -0.31
COLCA1-202ENST00000526150 TMEM206Q9H813 350 aa13.11□□□□□ -0.31
COLCA1-202ENST00000526150 OLFML3Q9NRN5 406 aa13.11□□□□□ -0.31
COLCA1-202ENST00000526150 ITGA11Q9UKX5 1188 aa13.11□□□□□ -0.31
COLCA1-202ENST00000526150 AGAP1Q9UPQ3 857 aa13.11□□□□□ -0.31
COLCA1-202ENST00000526150 SPTBN2O15020 2390 aa13.11□□□□□ -0.31
COLCA1-202ENST00000526150 DENND4CQ5VZ89 1909 aa13.11□□□□□ -0.31
COLCA1-202ENST00000526150 GCNT3O95395 438 aa13.1□□□□□ -0.31
COLCA1-202ENST00000526150 ITGB3P05106 788 aa13.1□□□□□ -0.31
COLCA1-202ENST00000526150 USP17L7P0C7H9 530 aa13.1□□□□□ -0.31
COLCA1-202ENST00000526150 TMEM191BP0C7N4 346 aa13.1□□□□□ -0.31
COLCA1-202ENST00000526150 HMGA1P17096 107 aaKnown RBP13.1□□□□□ -0.31
COLCA1-202ENST00000526150 ADSSP30520 456 aa13.1□□□□□ -0.31
COLCA1-202ENST00000526150 POLR2BP30876 1174 aaKnown RBP13.1□□□□□ -0.31
COLCA1-202ENST00000526150 RBP5P82980 135 aa13.1□□□□□ -0.31
COLCA1-202ENST00000526150 FAM160A1Q05DH4 1040 aa13.1□□□□□ -0.31
COLCA1-202ENST00000526150 DMWDQ09019 674 aa13.1□□□□□ -0.31
COLCA1-202ENST00000526150 MYO1EQ12965 1108 aa13.1□□□□□ -0.31
COLCA1-202ENST00000526150 SURF1Q15526 300 aa13.1□□□□□ -0.31
COLCA1-202ENST00000526150 AASDHQ4L235 1098 aaPredicted RBP13.1□□□□□ -0.31
COLCA1-202ENST00000526150 PPM1JQ5JR12 505 aa13.1□□□□□ -0.31
COLCA1-202ENST00000526150 CRELD2Q6UXH1 353 aaPredicted RBP13.1□□□□□ -0.31
COLCA1-202ENST00000526150 C4orf50Q6ZRC1 276 aa13.1□□□□□ -0.31
COLCA1-202ENST00000526150 CCDC73Q6ZRK6 1079 aa13.1□□□□□ -0.31
COLCA1-202ENST00000526150 DPH6Q7L8W6 267 aa13.1□□□□□ -0.31
COLCA1-202ENST00000526150 SPATA2LQ8IUW3 424 aaPredicted RBP13.1□□□□□ -0.31
COLCA1-202ENST00000526150 EFCAB13Q8IY85 973 aa13.1□□□□□ -0.31
COLCA1-202ENST00000526150 CSGALNACT2Q8N6G5 542 aa13.1□□□□□ -0.31
COLCA1-202ENST00000526150 LRRC15Q8TF66 581 aa13.1□□□□□ -0.31
COLCA1-202ENST00000526150 USP13Q92995 863 aaPredicted RBP13.1□□□□□ -0.31
COLCA1-202ENST00000526150 FUBP3Q96I24 572 aaKnown RBP eCLIP13.1□□□□□ -0.31
COLCA1-202ENST00000526150 ANKRD36BP1Q96IX9 119 aa13.1□□□□□ -0.31
COLCA1-202ENST00000526150 EPSTI1Q96J88 318 aa13.1□□□□□ -0.31
COLCA1-202ENST00000526150 CEP295NLQ96MC4 621 aa13.1□□□□□ -0.31
COLCA1-202ENST00000526150 CNTNAP3BQ96NU0 1288 aa13.1□□□□□ -0.31
COLCA1-202ENST00000526150 PI4K2AQ9BTU6 479 aa13.1□□□□□ -0.31
COLCA1-202ENST00000526150 CNTNAP3Q9BZ76 1288 aa13.1□□□□□ -0.31
COLCA1-202ENST00000526150 LRRC27Q9C0I9 530 aa13.1□□□□□ -0.31
COLCA1-202ENST00000526150 EBF3Q9H4W6 596 aa13.1□□□□□ -0.31
COLCA1-202ENST00000526150 GDAP2Q9NXN4 497 aa13.1□□□□□ -0.31
COLCA1-202ENST00000526150 DDX43Q9NXZ2 648 aaKnown RBP13.1□□□□□ -0.31
COLCA1-202ENST00000526150 RBAKQ9NYW8 714 aaPredicted RBP13.1□□□□□ -0.31
COLCA1-202ENST00000526150 EHD2Q9NZN4 543 aa13.1□□□□□ -0.31
COLCA1-202ENST00000526150 PCDHGA5Q9Y5G8 931 aa13.1□□□□□ -0.31
COLCA1-202ENST00000526150 SRPRBQ9Y5M8 271 aaKnown RBP13.1□□□□□ -0.31
COLCA1-202ENST00000526150 SPAG17Q6Q759 2223 aa13.1□□□□□ -0.31
COLCA1-202ENST00000526150 TRAV19A0A0A6YYK7 116 aa13.09□□□□□ -0.31
COLCA1-202ENST00000526150 VPS37CA5D8V6 355 aaPredicted RBP13.09□□□□□ -0.31
COLCA1-202ENST00000526150 TISP43B9A030 160 aa13.09□□□□□ -0.31
COLCA1-202ENST00000526150 PPP1R37O75864 691 aa13.09□□□□□ -0.31
COLCA1-202ENST00000526150 KRT19P08727 400 aa13.09□□□□□ -0.31
COLCA1-202ENST00000526150 ZNF806P0C7X5 589 aa13.09□□□□□ -0.31
COLCA1-202ENST00000526150 IDEP14735 1019 aa13.09□□□□□ -0.31
COLCA1-202ENST00000526150 IFNAR2P48551 515 aa13.09□□□□□ -0.31
COLCA1-202ENST00000526150 LIMK1P53667 647 aa13.09□□□□□ -0.31
COLCA1-202ENST00000526150 GRIN1Q05586 938 aa13.09□□□□□ -0.31
COLCA1-202ENST00000526150 SRSF5Q13243 272 aaKnown RBP13.09□□□□□ -0.31
COLCA1-202ENST00000526150 MAPRE1Q15691 268 aaKnown RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms