RNA–Protein interactions for RNA: ENST00000526025.1

CD44-222, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2 BASIC

Gene CD44, Length 1,052 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-222ENST00000526025 A0A1B0GTH6 734 aa22.12■■□□□ 1.13
CD44-222ENST00000526025 ZMYND10O75800 440 aa22.12■■□□□ 1.13
CD44-222ENST00000526025 VNN2O95498 520 aa22.12■■□□□ 1.13
CD44-222ENST00000526025 PTPN1P18031 435 aaKnown RBP22.12■■□□□ 1.13
CD44-222ENST00000526025 ELF1P32519 619 aa22.12■■□□□ 1.13
CD44-222ENST00000526025 NDST1P52848 882 aa22.12■■□□□ 1.13
CD44-222ENST00000526025 RBM10P98175 930 aaKnown RBP22.12■■□□□ 1.13
CD44-222ENST00000526025 ADCY1Q08828 1119 aa22.12■■□□□ 1.13
CD44-222ENST00000526025 KCNMA1Q12791 1236 aa22.12■■□□□ 1.13
CD44-222ENST00000526025 DPY19L2P1Q6NXN4 242 aa22.12■■□□□ 1.13
CD44-222ENST00000526025 C4orf50Q6ZRC1 276 aa22.12■■□□□ 1.13
CD44-222ENST00000526025 ARHGEF19Q8IW93 802 aa22.12■■□□□ 1.13
CD44-222ENST00000526025 WHAMMQ8TF30 809 aa22.12■■□□□ 1.13
CD44-222ENST00000526025 PPM1EQ8WY54 764 aa22.12■■□□□ 1.13
CD44-222ENST00000526025 SIX2Q9NPC8 291 aa22.12■■□□□ 1.13
CD44-222ENST00000526025 CRTAC1Q9NQ79 661 aa22.12■■□□□ 1.13
CD44-222ENST00000526025 RTN4Q9NQC3 1192 aaKnown RBP22.12■■□□□ 1.13
CD44-222ENST00000526025 PCDHB5Q9Y5E4 795 aa22.12■■□□□ 1.13
CD44-222ENST00000526025 C2orf16Q68DN1 1984 aa22.11■■□□□ 1.13
CD44-222ENST00000526025 MYBPHLA2RUH7 354 aa22.11■■□□□ 1.13
CD44-222ENST00000526025 HCRTO43612 131 aa22.11■■□□□ 1.13
CD44-222ENST00000526025 C8AP07357 584 aa22.11■■□□□ 1.13
CD44-222ENST00000526025 PDGFRBP09619 1106 aa22.11■■□□□ 1.13
CD44-222ENST00000526025 MFAP3P55082 362 aa22.11■■□□□ 1.13
CD44-222ENST00000526025 GTF3C4Q9UKN8 822 aa22.11■■□□□ 1.13
CD44-222ENST00000526025 CNTN6Q9UQ52 1028 aa22.11■■□□□ 1.13
CD44-222ENST00000526025 SEC24AO95486 1093 aa22.1■■□□□ 1.13
CD44-222ENST00000526025 CD58P19256 250 aa22.1■■□□□ 1.13
CD44-222ENST00000526025 ACO1P21399 889 aaKnown RBP22.1■■□□□ 1.13
CD44-222ENST00000526025 MAGEA11P43364 429 aa22.1■■□□□ 1.13
CD44-222ENST00000526025 TUFMP49411 452 aaKnown RBP22.1■■□□□ 1.13
CD44-222ENST00000526025 PSMC1P62191 440 aaKnown RBP22.1■■□□□ 1.13
CD44-222ENST00000526025 UBXN1Q04323 297 aa22.1■■□□□ 1.13
CD44-222ENST00000526025 ITIH3Q06033 890 aa22.1■■□□□ 1.13
CD44-222ENST00000526025 DLX2Q07687 328 aaPredicted RBP22.1■■□□□ 1.13
CD44-222ENST00000526025 PLD1Q13393 1074 aa22.1■■□□□ 1.13
CD44-222ENST00000526025 SYCE2Q6PIF2 218 aa22.1■■□□□ 1.13
CD44-222ENST00000526025 KREMEN1Q96MU8 473 aa22.1■■□□□ 1.13
CD44-222ENST00000526025 DPEP3Q9H4B8 488 aa22.1■■□□□ 1.13
CD44-222ENST00000526025 CYP4F11Q9HBI6 524 aa22.1■■□□□ 1.13
CD44-222ENST00000526025 UBE2TQ9NPD8 197 aaPredicted RBP22.1■■□□□ 1.13
CD44-222ENST00000526025 TMLHEQ9NVH6 421 aa22.1■■□□□ 1.13
CD44-222ENST00000526025 HMGXB4Q9UGU5 601 aa22.1■■□□□ 1.13
CD44-222ENST00000526025 SIK3Q9Y2K2 1263 aa22.1■■□□□ 1.13
CD44-222ENST00000526025 MYH10P35580 1976 aa22.1■■□□□ 1.13
CD44-222ENST00000526025 PRRG1O14668 218 aa22.09■■□□□ 1.13
CD44-222ENST00000526025 ATP2C2O75185 946 aa22.09■■□□□ 1.13
CD44-222ENST00000526025 SERPINC1P01008 464 aa22.09■■□□□ 1.13
CD44-222ENST00000526025 SPATA31D3P0C874 917 aa22.09■■□□□ 1.13
CD44-222ENST00000526025 FANCCQ00597 558 aa22.09■■□□□ 1.13
CD44-222ENST00000526025 DUSP4Q13115 394 aa22.09■■□□□ 1.13
CD44-222ENST00000526025 LEXMQ3ZCV2 418 aa22.09■■□□□ 1.13
CD44-222ENST00000526025 PPM1LQ5SGD2 360 aa22.09■■□□□ 1.13
CD44-222ENST00000526025 KLHDC7AQ5VTJ3 777 aa22.09■■□□□ 1.13
CD44-222ENST00000526025 SPATA31D4Q6ZUB0 917 aa22.09■■□□□ 1.13
CD44-222ENST00000526025 RRAGAQ7L523 313 aa22.09■■□□□ 1.13
CD44-222ENST00000526025 SPATA2LQ8IUW3 424 aaPredicted RBP22.09■■□□□ 1.13
CD44-222ENST00000526025 ATAD1Q8NBU5 361 aa22.09■■□□□ 1.13
CD44-222ENST00000526025 SMRP1Q8NCR6 262 aa22.09■■□□□ 1.13
CD44-222ENST00000526025 SLC7A14Q8TBB6 771 aa22.09■■□□□ 1.13
CD44-222ENST00000526025 MYLPFQ96A32 169 aa22.09■■□□□ 1.13
CD44-222ENST00000526025 PCED1BQ96HM7 432 aa22.09■■□□□ 1.13
CD44-222ENST00000526025 CEP295NLQ96MC4 621 aa22.09■■□□□ 1.13
CD44-222ENST00000526025 PGLYRP2Q96PD5 576 aa22.09■■□□□ 1.13
CD44-222ENST00000526025 TWNKQ96RR1 684 aa22.09■■□□□ 1.13
CD44-222ENST00000526025 ELOVL4Q9GZR5 314 aa22.09■■□□□ 1.13
CD44-222ENST00000526025 CD207Q9UJ71 328 aa22.09■■□□□ 1.13
CD44-222ENST00000526025 KIAA1257Q9ULG3 409 aa22.09■■□□□ 1.13
CD44-222ENST00000526025 INSL5Q9Y5Q6 135 aa22.09■■□□□ 1.13
CD44-222ENST00000526025 EYSQ5T1H1 3165 aa22.09■■□□□ 1.13
CD44-222ENST00000526025 ATP8B3O60423 1300 aa22.08■■□□□ 1.13
CD44-222ENST00000526025 A0A1W2PQC6 194 aa22.08■■□□□ 1.13
CD44-222ENST00000526025 PAEPP09466 180 aa22.08■■□□□ 1.13
CD44-222ENST00000526025 HAPLN1P10915 354 aaPredicted RBP22.08■■□□□ 1.13
CD44-222ENST00000526025 ZNF132P52740 706 aa22.08■■□□□ 1.13
CD44-222ENST00000526025 RAD23BP54727 409 aa22.08■■□□□ 1.13
CD44-222ENST00000526025 SYCP1Q15431 976 aa22.08■■□□□ 1.13
CD44-222ENST00000526025 PUS10Q3MIT2 529 aaKnown RBP22.08■■□□□ 1.13
CD44-222ENST00000526025 MDH1BQ5I0G3 518 aa22.08■■□□□ 1.13
CD44-222ENST00000526025 VSTM1Q6UX27 236 aa22.08■■□□□ 1.13
CD44-222ENST00000526025 ACOT1Q86TX2 421 aa22.08■■□□□ 1.13
CD44-222ENST00000526025 SLC4A11Q8NBS3 891 aa22.08■■□□□ 1.13
CD44-222ENST00000526025 SHC3Q92529 594 aa22.08■■□□□ 1.13
CD44-222ENST00000526025 KAT5Q92993 513 aa22.08■■□□□ 1.13
CD44-222ENST00000526025 TMEM176AQ96HP8 235 aa22.08■■□□□ 1.13
CD44-222ENST00000526025 LSM14BQ9BX40 385 aaKnown RBP22.08■■□□□ 1.13
CD44-222ENST00000526025 PRKD2Q9BZL6 878 aa22.08■■□□□ 1.13
CD44-222ENST00000526025 S1PR5Q9H228 398 aa22.08■■□□□ 1.13
CD44-222ENST00000526025 ADAM7Q9H2U9 754 aa22.08■■□□□ 1.13
CD44-222ENST00000526025 ABI2Q9NYB9 513 aaPredicted RBP22.08■■□□□ 1.13
CD44-222ENST00000526025 GREB1Q4ZG55 1949 aa22.08■■□□□ 1.12
CD44-222ENST00000526025 SPTBN5Q9NRC6 3674 aaKnown RBP22.08■■□□□ 1.12
CD44-222ENST00000526025 DENND4AQ7Z401 1863 aa22.07■■□□□ 1.12
CD44-222ENST00000526025 SPDYE4A6NLX3 237 aa22.07■■□□□ 1.12
CD44-222ENST00000526025 UCHL3P15374 230 aa22.07■■□□□ 1.12
CD44-222ENST00000526025 KCNA5P22460 613 aa22.07■■□□□ 1.12
CD44-222ENST00000526025 NR1I3Q14994 352 aa22.07■■□□□ 1.12
CD44-222ENST00000526025 NAA15Q9BXJ9 866 aaKnown RBP22.07■■□□□ 1.12
CD44-222ENST00000526025 CRISPLD1Q9H336 500 aa22.07■■□□□ 1.12
CD44-222ENST00000526025 CEP72Q9P209 647 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms