RNA–Protein interactions for RNA: ENST00000525435.1

CCS-202, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-202ENST00000525435 MTHFRP42898 656 aa13.2□□□□□ -0.3
CCS-202ENST00000525435 TPM4P67936 248 aa13.2□□□□□ -0.3
CCS-202ENST00000525435 DUSP4Q13115 394 aa13.2□□□□□ -0.3
CCS-202ENST00000525435 LRSAM1Q6UWE0 723 aa13.2□□□□□ -0.3
CCS-202ENST00000525435 VSTM1Q6UX27 236 aa13.2□□□□□ -0.3
CCS-202ENST00000525435 ATAD1Q8NBU5 361 aa13.2□□□□□ -0.3
CCS-202ENST00000525435 B3GALNT2Q8NCR0 500 aa13.2□□□□□ -0.3
CCS-202ENST00000525435 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.2□□□□□ -0.3
CCS-202ENST00000525435 SLC7A14Q8TBB6 771 aa13.2□□□□□ -0.3
CCS-202ENST00000525435 ASB2Q96Q27 587 aa13.2□□□□□ -0.3
CCS-202ENST00000525435 TMEM209Q96SK2 561 aa13.2□□□□□ -0.3
CCS-202ENST00000525435 NT5C1AQ9BXI3 368 aa13.2□□□□□ -0.3
CCS-202ENST00000525435 INTS2Q9H0H0 1204 aaKnown RBP13.2□□□□□ -0.3
CCS-202ENST00000525435 SDCBP2Q9H190 292 aa13.2□□□□□ -0.3
CCS-202ENST00000525435 CRTAC1Q9NQ79 661 aa13.2□□□□□ -0.3
CCS-202ENST00000525435 GTF3C4Q9UKN8 822 aa13.2□□□□□ -0.3
CCS-202ENST00000525435 KIAA1257Q9ULG3 409 aa13.2□□□□□ -0.3
CCS-202ENST00000525435 ASB3Q9Y575 518 aa13.2□□□□□ -0.3
CCS-202ENST00000525435 MYBPHLA2RUH7 354 aa13.19□□□□□ -0.3
CCS-202ENST00000525435 CILPO75339 1184 aa13.19□□□□□ -0.3
CCS-202ENST00000525435 SEC24AO95486 1093 aa13.19□□□□□ -0.3
CCS-202ENST00000525435 VNN2O95498 520 aa13.19□□□□□ -0.3
CCS-202ENST00000525435 ACAT1P24752 427 aaKnown RBP13.19□□□□□ -0.3
CCS-202ENST00000525435 PON1P27169 355 aa13.19□□□□□ -0.3
CCS-202ENST00000525435 MAGEA11P43364 429 aa13.19□□□□□ -0.3
CCS-202ENST00000525435 ALDH1A3P47895 512 aa13.19□□□□□ -0.3
CCS-202ENST00000525435 NDST1P52848 882 aa13.19□□□□□ -0.3
CCS-202ENST00000525435 ZNF445P59923 1031 aa13.19□□□□□ -0.3
CCS-202ENST00000525435 SMAD2Q15796 467 aaKnown RBP13.19□□□□□ -0.3
CCS-202ENST00000525435 HSP90AA4PQ58FG1 418 aa13.19□□□□□ -0.3
CCS-202ENST00000525435 FKBP15Q5T1M5 1219 aa13.19□□□□□ -0.3
CCS-202ENST00000525435 TRIM65Q6PJ69 517 aa13.19□□□□□ -0.3
CCS-202ENST00000525435 TMC5Q6UXY8 1006 aa13.19□□□□□ -0.3
CCS-202ENST00000525435 SPATA2LQ8IUW3 424 aaPredicted RBP13.19□□□□□ -0.3
CCS-202ENST00000525435 FAM200AQ8TCP9 573 aa13.19□□□□□ -0.3
CCS-202ENST00000525435 ZNF707Q96C28 371 aaPredicted RBP13.19□□□□□ -0.3
CCS-202ENST00000525435 ANP32EQ9BTT0 268 aa13.19□□□□□ -0.3
CCS-202ENST00000525435 CBX8Q9HC52 389 aa13.19□□□□□ -0.3
CCS-202ENST00000525435 AVENQ9NQS1 362 aaPredicted RBP13.19□□□□□ -0.3
CCS-202ENST00000525435 PRDM6Q9NQX0 595 aa13.19□□□□□ -0.3
CCS-202ENST00000525435 CISHQ9NSE2 258 aa13.19□□□□□ -0.3
CCS-202ENST00000525435 GCNT4Q9P109 453 aa13.19□□□□□ -0.3
CCS-202ENST00000525435 INSL5Q9Y5Q6 135 aa13.19□□□□□ -0.3
CCS-202ENST00000525435 MBTPS2O43462 519 aa13.18□□□□□ -0.3
CCS-202ENST00000525435 ATP2C2O75185 946 aa13.18□□□□□ -0.3
CCS-202ENST00000525435 RFPL2O75678 378 aa13.18□□□□□ -0.3
CCS-202ENST00000525435 LRG1P02750 347 aa13.18□□□□□ -0.3
CCS-202ENST00000525435 HAPLN1P10915 354 aaPredicted RBP13.18□□□□□ -0.3
CCS-202ENST00000525435 RAP1GAPP47736 663 aa13.18□□□□□ -0.3
CCS-202ENST00000525435 COPB1P53618 953 aaKnown RBP13.18□□□□□ -0.3
CCS-202ENST00000525435 EPHB3P54753 998 aa13.18□□□□□ -0.3
CCS-202ENST00000525435 MFAP3P55082 362 aa13.18□□□□□ -0.3
CCS-202ENST00000525435 RPL10AP62906 217 aaKnown RBP13.18□□□□□ -0.3
CCS-202ENST00000525435 TFF2Q03403 129 aa13.18□□□□□ -0.3
CCS-202ENST00000525435 CBX2Q14781 532 aaPredicted RBP13.18□□□□□ -0.3
CCS-202ENST00000525435 RARS2Q5T160 578 aaKnown RBP13.18□□□□□ -0.3
CCS-202ENST00000525435 PTCRAQ6ISU1 281 aaPredicted RBP13.18□□□□□ -0.3
CCS-202ENST00000525435 PHLDB3Q6NSJ2 640 aa13.18□□□□□ -0.3
CCS-202ENST00000525435 SCARA5Q6ZMJ2 495 aa13.18□□□□□ -0.3
CCS-202ENST00000525435 APTXQ7Z2E3 356 aaKnown RBP13.18□□□□□ -0.3
CCS-202ENST00000525435 ELMOD1Q8N336 334 aa13.18□□□□□ -0.3
CCS-202ENST00000525435 PPM1KQ8N3J5 372 aa13.18□□□□□ -0.3
CCS-202ENST00000525435 C12orf76Q8N812 135 aaPredicted RBP13.18□□□□□ -0.3
CCS-202ENST00000525435 LEMD2Q8NC56 503 aa13.18□□□□□ -0.3
CCS-202ENST00000525435 WHAMMQ8TF30 809 aa13.18□□□□□ -0.3
CCS-202ENST00000525435 SMG7Q92540 1137 aaKnown RBP13.18□□□□□ -0.3
CCS-202ENST00000525435 ELMO3Q96BJ8 720 aa13.18□□□□□ -0.3
CCS-202ENST00000525435 TMEM176AQ96HP8 235 aa13.18□□□□□ -0.3
CCS-202ENST00000525435 ZNF512Q96ME7 567 aaPredicted RBP13.18□□□□□ -0.3
CCS-202ENST00000525435 PGLYRP2Q96PD5 576 aa13.18□□□□□ -0.3
CCS-202ENST00000525435 CRACR2AQ9BSW2 395 aa13.18□□□□□ -0.3
CCS-202ENST00000525435 TSPY26PQ9H489 355 aa13.18□□□□□ -0.3
CCS-202ENST00000525435 PIDD1Q9HB75 910 aa13.18□□□□□ -0.3
CCS-202ENST00000525435 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.18□□□□□ -0.32e-8■■■■■ 65.4
CCS-202ENST00000525435 TMLHEQ9NVH6 421 aa13.18□□□□□ -0.3
CCS-202ENST00000525435 APEX2Q9UBZ4 518 aa13.18□□□□□ -0.3
CCS-202ENST00000525435 PRKAG3Q9UGI9 489 aa13.18□□□□□ -0.3
CCS-202ENST00000525435 CNTN6Q9UQ52 1028 aa13.18□□□□□ -0.3
CCS-202ENST00000525435 SLC27A5Q9Y2P5 690 aa13.18□□□□□ -0.3
CCS-202ENST00000525435 DAAM1Q9Y4D1 1078 aa13.18□□□□□ -0.3
CCS-202ENST00000525435 USP15Q9Y4E8 981 aaPredicted RBP13.18□□□□□ -0.3
CCS-202ENST00000525435 NME7Q9Y5B8 376 aa13.18□□□□□ -0.3
CCS-202ENST00000525435 ATP8B3O60423 1300 aa13.17□□□□□ -0.3
CCS-202ENST00000525435 LGALS16A8MUM7 142 aa13.17□□□□□ -0.3
CCS-202ENST00000525435 GOLGA6L19H0YKK7 550 aa13.17□□□□□ -0.3
CCS-202ENST00000525435 PES1O00541 588 aaKnown RBP13.17□□□□□ -0.3
CCS-202ENST00000525435 MICAL2O94851 1124 aa13.17□□□□□ -0.3
CCS-202ENST00000525435 PAEPP09466 180 aa13.17□□□□□ -0.3
CCS-202ENST00000525435 BMP1P13497 986 aa13.17□□□□□ -0.3
CCS-202ENST00000525435 PTPN2P17706 415 aa13.17□□□□□ -0.3
CCS-202ENST00000525435 SLC9A1P19634 815 aa13.17□□□□□ -0.3
CCS-202ENST00000525435 RFX1P22670 979 aa13.17□□□□□ -0.3
CCS-202ENST00000525435 LRMPQ12912 555 aa13.17□□□□□ -0.3
CCS-202ENST00000525435 MGAT5BQ3V5L5 792 aa13.17□□□□□ -0.3
CCS-202ENST00000525435 IQCEQ6IPM2 695 aa13.17□□□□□ -0.3
CCS-202ENST00000525435 ACOT1Q86TX2 421 aa13.17□□□□□ -0.3
CCS-202ENST00000525435 ITIH5Q86UX2 942 aa13.17□□□□□ -0.3
CCS-202ENST00000525435 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.17□□□□□ -0.3
CCS-202ENST00000525435 UBR7Q8N806 425 aa13.17□□□□□ -0.3
CCS-202ENST00000525435 PCED1BQ96HM7 432 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms