RNA–Protein interactions for RNA: ENST00000525241.1

CD44-215, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 440 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-215ENST00000525241 FAM109AQ8N4B1 249 aa5.39□□□□□ -1.55
CD44-215ENST00000525241 LPIN2Q92539 896 aa5.39□□□□□ -1.55
CD44-215ENST00000525241 TRIM43Q96BQ3 446 aaPredicted RBP5.39□□□□□ -1.55
CD44-215ENST00000525241 COQ10AQ96MF6 247 aa5.39□□□□□ -1.55
CD44-215ENST00000525241 OSBPL9Q96SU4 736 aa5.39□□□□□ -1.55
CD44-215ENST00000525241 MESP1Q9BRJ9 268 aa5.39□□□□□ -1.55
CD44-215ENST00000525241 BTBD1Q9H0C5 482 aa5.39□□□□□ -1.55
CD44-215ENST00000525241 NUP62CLQ9H1M0 184 aa5.39□□□□□ -1.55
CD44-215ENST00000525241 PCED1AQ9H1Q7 454 aa5.39□□□□□ -1.55
CD44-215ENST00000525241 CYP4F11Q9HBI6 524 aa5.39□□□□□ -1.55
CD44-215ENST00000525241 ZNF287Q9HBT7 754 aa5.39□□□□□ -1.55
CD44-215ENST00000525241 CASS4Q9NQ75 786 aa5.39□□□□□ -1.55
CD44-215ENST00000525241 KCTD5Q9NXV2 234 aa5.39□□□□□ -1.55
CD44-215ENST00000525241 COL20A1Q9P218 1284 aa5.39□□□□□ -1.55
CD44-215ENST00000525241 AFF4Q9UHB7 1163 aaKnown RBP5.39□□□□□ -1.55
CD44-215ENST00000525241 OGDHLQ9ULD0 1010 aa5.39□□□□□ -1.55
CD44-215ENST00000525241 EPN1Q9Y6I3 576 aaPredicted RBP5.39□□□□□ -1.55
CD44-215ENST00000525241 MAST3O60307 1309 aa5.39□□□□□ -1.55
CD44-215ENST00000525241 CYR61O00622 381 aa5.38□□□□□ -1.55
CD44-215ENST00000525241 FOXN1O15353 648 aa5.38□□□□□ -1.55
CD44-215ENST00000525241 PROM1O43490 865 aa5.38□□□□□ -1.55
CD44-215ENST00000525241 TRIAP1O43715 76 aa5.38□□□□□ -1.55
CD44-215ENST00000525241 KRT18P05783 430 aaKnown RBP5.38□□□□□ -1.55
CD44-215ENST00000525241 HKR1P10072 659 aa5.38□□□□□ -1.55
CD44-215ENST00000525241 PHKG2P15735 406 aa5.38□□□□□ -1.55
CD44-215ENST00000525241 PPP3CBP16298 524 aa5.38□□□□□ -1.55
CD44-215ENST00000525241 MPLP40238 635 aa5.38□□□□□ -1.55
CD44-215ENST00000525241 WNT3P56703 355 aa5.38□□□□□ -1.55
CD44-215ENST00000525241 LILRA4P59901 499 aa5.38□□□□□ -1.55
CD44-215ENST00000525241 FOXI1Q12951 378 aa5.38□□□□□ -1.55
CD44-215ENST00000525241 RAB32Q13637 225 aa5.38□□□□□ -1.55
CD44-215ENST00000525241 RBM20Q5T481 1227 aaKnown RBP5.38□□□□□ -1.55
CD44-215ENST00000525241 VPS53Q5VIR6 699 aa5.38□□□□□ -1.55
CD44-215ENST00000525241 LAIR1Q6GTX8 287 aa5.38□□□□□ -1.55
CD44-215ENST00000525241 VWA1Q6PCB0 445 aa5.38□□□□□ -1.55
CD44-215ENST00000525241 LDLRAD3Q86YD5 345 aa5.38□□□□□ -1.55
CD44-215ENST00000525241 CCAR1Q8IX12 1150 aaKnown RBP5.38□□□□□ -1.55
CD44-215ENST00000525241 BEND2Q8NDZ0 799 aa5.38□□□□□ -1.55
CD44-215ENST00000525241 OR56A3Q8NH54 315 aa5.38□□□□□ -1.55
CD44-215ENST00000525241 PHKBQ93100 1093 aa5.38□□□□□ -1.55
CD44-215ENST00000525241 MSLNLQ96KJ4 702 aa5.38□□□□□ -1.55
CD44-215ENST00000525241 MOGAT1Q96PD6 335 aa5.38□□□□□ -1.55
CD44-215ENST00000525241 PRRX2Q99811 253 aa5.38□□□□□ -1.55
CD44-215ENST00000525241 AIFM2Q9BRQ8 373 aa5.38□□□□□ -1.55
CD44-215ENST00000525241 AMBRA1Q9C0C7 1298 aa5.38□□□□□ -1.55
CD44-215ENST00000525241 A1CFQ9NQ94 594 aaKnown RBP5.38□□□□□ -1.55
CD44-215ENST00000525241 TMEM191CA6NGB0 347 aa5.37□□□□□ -1.55
CD44-215ENST00000525241 PMM2O15305 246 aa5.37□□□□□ -1.55
CD44-215ENST00000525241 AKAP8O43823 692 aaKnown RBP5.37□□□□□ -1.55
CD44-215ENST00000525241 SLPIP03973 132 aa5.37□□□□□ -1.55
CD44-215ENST00000525241 CYP2C9P11712 490 aa5.37□□□□□ -1.55
CD44-215ENST00000525241 ZKSCAN1P17029 563 aaPredicted RBP5.37□□□□□ -1.55
CD44-215ENST00000525241 RPL17P18621 184 aaKnown RBP5.37□□□□□ -1.55
CD44-215ENST00000525241 PIK3CBP42338 1070 aa5.37□□□□□ -1.55
CD44-215ENST00000525241 PXNP49023 591 aaPredicted RBP5.37□□□□□ -1.55
CD44-215ENST00000525241 SEC24CP53992 1094 aa5.37□□□□□ -1.55
CD44-215ENST00000525241 LOXL3P58215 753 aa5.37□□□□□ -1.55
CD44-215ENST00000525241 FHL2Q14192 279 aa5.37□□□□□ -1.55
CD44-215ENST00000525241 DCAF12L1Q5VU92 463 aa5.37□□□□□ -1.55
CD44-215ENST00000525241 CCSAPQ6IQ19 270 aaPredicted RBP5.37□□□□□ -1.55
CD44-215ENST00000525241 Q6ZNX1 250 aa5.37□□□□□ -1.55
CD44-215ENST00000525241 TSHZ1Q6ZSZ6 1077 aa5.37□□□□□ -1.55
CD44-215ENST00000525241 GAS2L3Q86XJ1 694 aa5.37□□□□□ -1.55
CD44-215ENST00000525241 ZNF280BQ86YH2 543 aa5.37□□□□□ -1.55
CD44-215ENST00000525241 MPP5Q8N3R9 675 aa5.37□□□□□ -1.55
CD44-215ENST00000525241 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.37□□□□□ -1.55
CD44-215ENST00000525241 MYCBPAPQ8TBZ2 947 aa5.37□□□□□ -1.55
CD44-215ENST00000525241 NAA15Q9BXJ9 866 aaKnown RBP5.37□□□□□ -1.55
CD44-215ENST00000525241 MS4A7Q9GZW8 240 aaPredicted RBP5.37□□□□□ -1.55
CD44-215ENST00000525241 ANO9A1A5B4 782 aa5.36□□□□□ -1.55
CD44-215ENST00000525241 F8W8V4 182 aa5.36□□□□□ -1.55
CD44-215ENST00000525241 PYCARD-AS1I3L0S3 204 aa5.36□□□□□ -1.55
CD44-215ENST00000525241 YY2O15391 372 aa5.36□□□□□ -1.55
CD44-215ENST00000525241 ESRRBO95718 433 aa5.36□□□□□ -1.55
CD44-215ENST00000525241 MYL1P05976 194 aa5.36□□□□□ -1.55
CD44-215ENST00000525241 XRCC6P12956 609 aaKnown RBP eCLIP5.36□□□□□ -1.55
CD44-215ENST00000525241 CD6P30203 668 aa5.36□□□□□ -1.55
CD44-215ENST00000525241 ADRA1BP35368 520 aa5.36□□□□□ -1.55
CD44-215ENST00000525241 AVPR1BP47901 424 aa5.36□□□□□ -1.55
CD44-215ENST00000525241 RPS16P62249 146 aaKnown RBP5.36□□□□□ -1.55
CD44-215ENST00000525241 ZIK1Q3SY52 487 aaPredicted RBP5.36□□□□□ -1.55
CD44-215ENST00000525241 SLC44A4Q53GD3 710 aa5.36□□□□□ -1.55
CD44-215ENST00000525241 HECTD2Q5U5R9 776 aa5.36□□□□□ -1.55
CD44-215ENST00000525241 KIAA0895LQ68EN5 471 aa5.36□□□□□ -1.55
CD44-215ENST00000525241 PCSK4Q6UW60 755 aa5.36□□□□□ -1.55
CD44-215ENST00000525241 LAYNQ6UX15 382 aa5.36□□□□□ -1.55
CD44-215ENST00000525241 SLC44A3Q8N4M1 653 aa5.36□□□□□ -1.55
CD44-215ENST00000525241 RAPGEF4Q8WZA2 1011 aa5.36□□□□□ -1.55
CD44-215ENST00000525241 NELL2Q99435 816 aa5.36□□□□□ -1.55
CD44-215ENST00000525241 TTPALQ9BTX7 342 aa5.36□□□□□ -1.55
CD44-215ENST00000525241 PTDSS2Q9BVG9 487 aa5.36□□□□□ -1.55
CD44-215ENST00000525241 TMPRSS5Q9H3S3 457 aa5.36□□□□□ -1.55
CD44-215ENST00000525241 SHOC2Q9UQ13 582 aa5.36□□□□□ -1.55
CD44-215ENST00000525241 DMTF1Q9Y222 760 aa5.36□□□□□ -1.55
CD44-215ENST00000525241 SSX2IPQ9Y2D8 614 aa5.36□□□□□ -1.55
CD44-215ENST00000525241 PAXBP1Q9Y5B6 917 aa5.36□□□□□ -1.55
CD44-215ENST00000525241 SALL3Q9BXA9 1300 aa5.36□□□□□ -1.55
CD44-215ENST00000525241 MBD3L4A6NDZ8 208 aaPredicted RBP5.35□□□□□ -1.55
CD44-215ENST00000525241 MBD3L3A6NE82 208 aaPredicted RBP5.35□□□□□ -1.55
CD44-215ENST00000525241 hCG_1984214I3L0E3 225 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms