RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 LIMS2Q7Z4I7 341 aa13.76□□□□□ -0.21
TRAPPC4-205ENST00000525079 PRSS33Q8NF86 280 aa13.76□□□□□ -0.21
TRAPPC4-205ENST00000525079 ZSCAN18Q8TBC5 510 aaPredicted RBP13.76□□□□□ -0.21
TRAPPC4-205ENST00000525079 SYT15Q9BQS2 421 aa13.76□□□□□ -0.21
TRAPPC4-205ENST00000525079 SNX25Q9H3E2 840 aa13.76□□□□□ -0.21
TRAPPC4-205ENST00000525079 ATXN3LQ9H3M9 355 aa13.76□□□□□ -0.21
TRAPPC4-205ENST00000525079 ZFP14Q9HCL3 533 aa13.76□□□□□ -0.21
TRAPPC4-205ENST00000525079 SLC2A4RGQ9NR83 387 aa13.76□□□□□ -0.21
TRAPPC4-205ENST00000525079 FRMD4BQ9Y2L6 1034 aa13.76□□□□□ -0.21
TRAPPC4-205ENST00000525079 NME7Q9Y5B8 376 aa13.76□□□□□ -0.21
TRAPPC4-205ENST00000525079 AKAP3O75969 853 aa13.75□□□□□ -0.21
TRAPPC4-205ENST00000525079 VNN1O95497 513 aa13.75□□□□□ -0.21
TRAPPC4-205ENST00000525079 RFX1P22670 979 aa13.75□□□□□ -0.21
TRAPPC4-205ENST00000525079 WARSP23381 471 aaKnown RBP13.75□□□□□ -0.21
TRAPPC4-205ENST00000525079 PCSK1P29120 753 aa13.75□□□□□ -0.21
TRAPPC4-205ENST00000525079 GNL1P36915 607 aaPredicted RBP13.75□□□□□ -0.21
TRAPPC4-205ENST00000525079 CDH8P55286 799 aa13.75□□□□□ -0.21
TRAPPC4-205ENST00000525079 CLDN10P78369 228 aa13.75□□□□□ -0.21
TRAPPC4-205ENST00000525079 CYP4F8P98187 520 aa13.75□□□□□ -0.21
TRAPPC4-205ENST00000525079 ADAM9Q13443 819 aa13.75□□□□□ -0.21
TRAPPC4-205ENST00000525079 NCOA4Q13772 614 aa13.75□□□□□ -0.21
TRAPPC4-205ENST00000525079 SPATA2LQ8IUW3 424 aaPredicted RBP13.75□□□□□ -0.21
TRAPPC4-205ENST00000525079 SCN4BQ8IWT1 228 aa13.75□□□□□ -0.21
TRAPPC4-205ENST00000525079 OR6B3Q8NGW1 331 aa13.75□□□□□ -0.21
TRAPPC4-205ENST00000525079 SPATA18Q8TC71 538 aa13.75□□□□□ -0.21
TRAPPC4-205ENST00000525079 TMC2Q8TDI7 906 aa13.75□□□□□ -0.21
TRAPPC4-205ENST00000525079 TMEM174Q8WUU8 243 aa13.75□□□□□ -0.21
TRAPPC4-205ENST00000525079 SYAP1Q96A49 352 aaPredicted RBP13.75□□□□□ -0.21
TRAPPC4-205ENST00000525079 ELSPBP1Q96BH3 223 aa13.75□□□□□ -0.21
TRAPPC4-205ENST00000525079 FAM122AQ96E09 287 aa13.75□□□□□ -0.21
TRAPPC4-205ENST00000525079 EEF2KMTQ96G04 330 aa13.75□□□□□ -0.21
TRAPPC4-205ENST00000525079 ASB16Q96NS5 453 aa13.75□□□□□ -0.21
TRAPPC4-205ENST00000525079 XYLT2Q9H1B5 865 aa13.75□□□□□ -0.21
TRAPPC4-205ENST00000525079 CRTAC1Q9NQ79 661 aa13.75□□□□□ -0.21
TRAPPC4-205ENST00000525079 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.75□□□□□ -0.211e-22■■■■■ 419.2
TRAPPC4-205ENST00000525079 RMND1Q9NWS8 449 aa13.75□□□□□ -0.21
TRAPPC4-205ENST00000525079 MAGED2Q9UNF1 606 aaPredicted RBP13.75□□□□□ -0.21
TRAPPC4-205ENST00000525079 PCDHA5Q9Y5H7 936 aa13.75□□□□□ -0.21
TRAPPC4-205ENST00000525079 COL4A3Q01955 1670 aa13.75□□□□□ -0.21
TRAPPC4-205ENST00000525079 SMC2O95347 1197 aa13.74□□□□□ -0.21
TRAPPC4-205ENST00000525079 TRIM49P0CI25 452 aa13.74□□□□□ -0.21
TRAPPC4-205ENST00000525079 TRIM49CP0CI26 452 aa13.74□□□□□ -0.21
TRAPPC4-205ENST00000525079 ATICP31939 592 aa13.74□□□□□ -0.21
TRAPPC4-205ENST00000525079 PRCPP42785 496 aa13.74□□□□□ -0.21
TRAPPC4-205ENST00000525079 RAP1GAPP47736 663 aa13.74□□□□□ -0.21
TRAPPC4-205ENST00000525079 CLCN5P51795 746 aa13.74□□□□□ -0.21
TRAPPC4-205ENST00000525079 VAMP7P51809 220 aa13.74□□□□□ -0.21
TRAPPC4-205ENST00000525079 AP3M2P53677 418 aa13.74□□□□□ -0.21
TRAPPC4-205ENST00000525079 CYP27A1Q02318 531 aa13.74□□□□□ -0.21
TRAPPC4-205ENST00000525079 MAPK8IP2Q13387 824 aaPredicted RBP13.74□□□□□ -0.21
TRAPPC4-205ENST00000525079 ZNF699Q32M78 642 aa13.74□□□□□ -0.21
TRAPPC4-205ENST00000525079 C1orf220Q5T0J3 134 aa13.74□□□□□ -0.21
TRAPPC4-205ENST00000525079 GPR158Q5T848 1215 aa13.74□□□□□ -0.21
TRAPPC4-205ENST00000525079 ZNF658Q5TYW1 1059 aaPredicted RBP13.74□□□□□ -0.21
TRAPPC4-205ENST00000525079 FAM171BQ6P995 826 aa13.74□□□□□ -0.21
TRAPPC4-205ENST00000525079 SCARA5Q6ZMJ2 495 aa13.74□□□□□ -0.21
TRAPPC4-205ENST00000525079 FAM186BQ8IYM0 893 aa13.74□□□□□ -0.21
TRAPPC4-205ENST00000525079 SMARCD2Q92925 531 aa13.74□□□□□ -0.21
TRAPPC4-205ENST00000525079 SMARCE1Q969G3 411 aa13.74□□□□□ -0.21
TRAPPC4-205ENST00000525079 MYLPFQ96A32 169 aa13.74□□□□□ -0.21
TRAPPC4-205ENST00000525079 TIGD1Q96MW7 591 aa13.74□□□□□ -0.21
TRAPPC4-205ENST00000525079 DPEP3Q9H4B8 488 aa13.74□□□□□ -0.21
TRAPPC4-205ENST00000525079 SMYD3Q9H7B4 428 aa13.74□□□□□ -0.21
TRAPPC4-205ENST00000525079 MMRN2Q9H8L6 949 aa13.74□□□□□ -0.21
TRAPPC4-205ENST00000525079 TBC1D17Q9HA65 648 aa13.74□□□□□ -0.21
TRAPPC4-205ENST00000525079 IL21Q9HBE4 155 aa13.74□□□□□ -0.21
TRAPPC4-205ENST00000525079 ARHGEF3Q9NR81 526 aa13.74□□□□□ -0.21
TRAPPC4-205ENST00000525079 MAGEC2Q9UBF1 373 aaPredicted RBP13.74□□□□□ -0.21
TRAPPC4-205ENST00000525079 CDH9Q9ULB4 789 aa13.74□□□□□ -0.21
TRAPPC4-205ENST00000525079 CIZ1Q9ULV3 898 aaPredicted RBP13.74□□□□□ -0.21
TRAPPC4-205ENST00000525079 ARIH1Q9Y4X5 557 aaPredicted RBP13.74□□□□□ -0.21
TRAPPC4-205ENST00000525079 NCANO14594 1321 aa13.73□□□□□ -0.21
TRAPPC4-205ENST00000525079 ZNF318Q5VUA4 2279 aa13.73□□□□□ -0.21
TRAPPC4-205ENST00000525079 TACC1O75410 805 aa13.73□□□□□ -0.21
TRAPPC4-205ENST00000525079 STAU1O95793 577 aaKnown RBP13.73□□□□□ -0.21
TRAPPC4-205ENST00000525079 HMGA1P17096 107 aaKnown RBP13.73□□□□□ -0.21
TRAPPC4-205ENST00000525079 RPL13P26373 211 aaKnown RBP13.73□□□□□ -0.21
TRAPPC4-205ENST00000525079 PSMC2P35998 433 aaKnown RBP13.73□□□□□ -0.21
TRAPPC4-205ENST00000525079 PLA2G5P39877 138 aa13.73□□□□□ -0.21
TRAPPC4-205ENST00000525079 RPL10AP62906 217 aaKnown RBP13.73□□□□□ -0.21
TRAPPC4-205ENST00000525079 NFIL3Q16649 462 aa13.73□□□□□ -0.21
TRAPPC4-205ENST00000525079 ZACNQ401N2 412 aa13.73□□□□□ -0.21
TRAPPC4-205ENST00000525079 ZCWPW2Q504Y3 356 aa13.73□□□□□ -0.21
TRAPPC4-205ENST00000525079 SLC44A4Q53GD3 710 aa13.73□□□□□ -0.21
TRAPPC4-205ENST00000525079 ZNF667Q5HYK9 610 aa13.73□□□□□ -0.21
TRAPPC4-205ENST00000525079 MDH1BQ5I0G3 518 aa13.73□□□□□ -0.21
TRAPPC4-205ENST00000525079 VITQ6UXI7 678 aa13.73□□□□□ -0.21
TRAPPC4-205ENST00000525079 SV2AQ7L0J3 742 aa13.73□□□□□ -0.21
TRAPPC4-205ENST00000525079 ARID3BQ8IVW6 561 aaPredicted RBP13.73□□□□□ -0.21
TRAPPC4-205ENST00000525079 RSPRY1Q96DX4 576 aa13.73□□□□□ -0.21
TRAPPC4-205ENST00000525079 GSDMAQ96QA5 445 aa13.73□□□□□ -0.21
TRAPPC4-205ENST00000525079 MKNK1Q9BUB5 465 aa13.73□□□□□ -0.21
TRAPPC4-205ENST00000525079 TRMT61BQ9BVS5 477 aaKnown RBP13.73□□□□□ -0.21
TRAPPC4-205ENST00000525079 GPR88Q9GZN0 384 aa13.73□□□□□ -0.21
TRAPPC4-205ENST00000525079 SDCBP2Q9H190 292 aa13.73□□□□□ -0.21
TRAPPC4-205ENST00000525079 ABCB6Q9NP58 842 aa13.73□□□□□ -0.21
TRAPPC4-205ENST00000525079 SLC38A8A6NNN8 435 aa13.72□□□□□ -0.21
TRAPPC4-205ENST00000525079 HEPACAM2A8MVW5 462 aa13.72□□□□□ -0.21
TRAPPC4-205ENST00000525079 A8MXQ7 604 aa13.72□□□□□ -0.21
TRAPPC4-205ENST00000525079 KINO60870 393 aaKnown RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms