RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 KCNK16Q96T55 309 aa4.91□□□□□ -1.62
CHMP4A-202ENST00000524955 PKMYT1Q99640 499 aa4.91□□□□□ -1.62
CHMP4A-202ENST00000524955 MED10Q9BTT4 135 aa4.91□□□□□ -1.62
CHMP4A-202ENST00000524955 B3GNT5Q9BYG0 378 aa4.91□□□□□ -1.62
CHMP4A-202ENST00000524955 BCO2Q9BYV7 579 aa4.91□□□□□ -1.62
CHMP4A-202ENST00000524955 NAT10Q9H0A0 1025 aaKnown RBP4.91□□□□□ -1.62
CHMP4A-202ENST00000524955 RBSNQ9H1K0 784 aa4.91□□□□□ -1.62
CHMP4A-202ENST00000524955 S1PR5Q9H228 398 aa4.91□□□□□ -1.62
CHMP4A-202ENST00000524955 ADAM7Q9H2U9 754 aa4.91□□□□□ -1.62
CHMP4A-202ENST00000524955 PIDD1Q9HB75 910 aa4.91□□□□□ -1.62
CHMP4A-202ENST00000524955 SIX2Q9NPC8 291 aa4.91□□□□□ -1.62
CHMP4A-202ENST00000524955 NLRC4Q9NPP4 1024 aa4.91□□□□□ -1.62
CHMP4A-202ENST00000524955 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.91□□□□□ -1.62
CHMP4A-202ENST00000524955 CISHQ9NSE2 258 aa4.91□□□□□ -1.62
CHMP4A-202ENST00000524955 FAM207AQ9NSI2 230 aaPredicted RBP4.91□□□□□ -1.62
CHMP4A-202ENST00000524955 CEP72Q9P209 647 aa4.91□□□□□ -1.62
CHMP4A-202ENST00000524955 DNMT3BQ9UBC3 853 aaKnown RBP4.91□□□□□ -1.62
CHMP4A-202ENST00000524955 LIMA1Q9UHB6 759 aaKnown RBP4.91□□□□□ -1.62
CHMP4A-202ENST00000524955 CD207Q9UJ71 328 aa4.91□□□□□ -1.62
CHMP4A-202ENST00000524955 FBXW11Q9UKB1 542 aa4.91□□□□□ -1.62
CHMP4A-202ENST00000524955 DNAJC12Q9UKB3 198 aa4.91□□□□□ -1.62
CHMP4A-202ENST00000524955 DSEQ9UL01 958 aa4.91□□□□□ -1.62
CHMP4A-202ENST00000524955 MAGED2Q9UNF1 606 aaPredicted RBP4.91□□□□□ -1.62
CHMP4A-202ENST00000524955 SSX2IPQ9Y2D8 614 aa4.91□□□□□ -1.62
CHMP4A-202ENST00000524955 COQ4Q9Y3A0 265 aa4.91□□□□□ -1.62
CHMP4A-202ENST00000524955 USP15Q9Y4E8 981 aaPredicted RBP4.91□□□□□ -1.62
CHMP4A-202ENST00000524955 YIPF1Q9Y548 306 aa4.91□□□□□ -1.62
CHMP4A-202ENST00000524955 PCDHB4Q9Y5E5 795 aa4.91□□□□□ -1.62
CHMP4A-202ENST00000524955 IRAK3Q9Y616 596 aa4.91□□□□□ -1.62
CHMP4A-202ENST00000524955 NLRC5Q86WI3 1866 aa4.91□□□□□ -1.62
CHMP4A-202ENST00000524955 TDRD15B5MCY1 1934 aaKnown RBP4.91□□□□□ -1.62
CHMP4A-202ENST00000524955 REV3LO60673 3130 aa4.9□□□□□ -1.62
CHMP4A-202ENST00000524955 RALGAPA2Q2PPJ7 1873 aa4.9□□□□□ -1.62
CHMP4A-202ENST00000524955 CARNS1A5YM72 827 aa4.9□□□□□ -1.63
CHMP4A-202ENST00000524955 F8VP50 259 aa4.9□□□□□ -1.63
CHMP4A-202ENST00000524955 GOLGA6L19H0YKK7 550 aa4.9□□□□□ -1.63
CHMP4A-202ENST00000524955 TULP2O00295 520 aa4.9□□□□□ -1.63
CHMP4A-202ENST00000524955 PIK3R2O00459 728 aa4.9□□□□□ -1.63
CHMP4A-202ENST00000524955 MBTPS2O43462 519 aa4.9□□□□□ -1.63
CHMP4A-202ENST00000524955 N4BP1O75113 896 aaKnown RBP4.9□□□□□ -1.63
CHMP4A-202ENST00000524955 CILPO75339 1184 aa4.9□□□□□ -1.63
CHMP4A-202ENST00000524955 TACC1O75410 805 aa4.9□□□□□ -1.63
CHMP4A-202ENST00000524955 ZMYND10O75800 440 aa4.9□□□□□ -1.63
CHMP4A-202ENST00000524955 STAU1O95793 577 aaKnown RBP4.9□□□□□ -1.63
CHMP4A-202ENST00000524955 LRG1P02750 347 aa4.9□□□□□ -1.63
CHMP4A-202ENST00000524955 TPM2P07951 284 aa4.9□□□□□ -1.63
CHMP4A-202ENST00000524955 HAPLN1P10915 354 aaPredicted RBP4.9□□□□□ -1.63
CHMP4A-202ENST00000524955 MYL4P12829 197 aa4.9□□□□□ -1.63
CHMP4A-202ENST00000524955 P4HA1P13674 534 aa4.9□□□□□ -1.63
CHMP4A-202ENST00000524955 ATF2P15336 505 aa4.9□□□□□ -1.63
CHMP4A-202ENST00000524955 CD19P15391 556 aa4.9□□□□□ -1.63
CHMP4A-202ENST00000524955 ACO1P21399 889 aaKnown RBP4.9□□□□□ -1.63
CHMP4A-202ENST00000524955 EEF1GP26641 437 aaKnown RBP4.9□□□□□ -1.63
CHMP4A-202ENST00000524955 PCSK1P29120 753 aa4.9□□□□□ -1.63
CHMP4A-202ENST00000524955 GRIK1P39086 918 aa4.9□□□□□ -1.63
CHMP4A-202ENST00000524955 LHX1P48742 406 aa4.9□□□□□ -1.63
CHMP4A-202ENST00000524955 RAD23BP54727 409 aa4.9□□□□□ -1.63
CHMP4A-202ENST00000524955 MAP3K7CLP57077 242 aa4.9□□□□□ -1.63
CHMP4A-202ENST00000524955 MCCD1P59942 119 aaPredicted RBP4.9□□□□□ -1.63
CHMP4A-202ENST00000524955 FANCCQ00597 558 aa4.9□□□□□ -1.63
CHMP4A-202ENST00000524955 TSPY1Q01534 308 aa4.9□□□□□ -1.63
CHMP4A-202ENST00000524955 CREMQ03060 361 aa4.9□□□□□ -1.63
CHMP4A-202ENST00000524955 GOLGA8FQ08AF8 430 aa4.9□□□□□ -1.63
CHMP4A-202ENST00000524955 GOLGA8DPQ0D2H9 430 aa4.9□□□□□ -1.63
CHMP4A-202ENST00000524955 GPR17Q13304 367 aa4.9□□□□□ -1.63
CHMP4A-202ENST00000524955 PLD1Q13393 1074 aa4.9□□□□□ -1.63
CHMP4A-202ENST00000524955 CBX2Q14781 532 aaPredicted RBP4.9□□□□□ -1.63
CHMP4A-202ENST00000524955 GOLGA7BQ2TAP0 167 aa4.9□□□□□ -1.63
CHMP4A-202ENST00000524955 CT47A1Q5JQC4 288 aaPredicted RBP4.9□□□□□ -1.63
CHMP4A-202ENST00000524955 FKBP15Q5T1M5 1219 aa4.9□□□□□ -1.63
CHMP4A-202ENST00000524955 STXBP5Q5T5C0 1151 aa4.9□□□□□ -1.63
CHMP4A-202ENST00000524955 PPP1R26Q5T8A7 1209 aaPredicted RBP4.9□□□□□ -1.63
CHMP4A-202ENST00000524955 LIN9Q5TKA1 542 aa4.9□□□□□ -1.63
CHMP4A-202ENST00000524955 IQCEQ6IPM2 695 aa4.9□□□□□ -1.63
CHMP4A-202ENST00000524955 PTCRAQ6ISU1 281 aaPredicted RBP4.9□□□□□ -1.63
CHMP4A-202ENST00000524955 DPY19L2P1Q6NXN4 242 aa4.9□□□□□ -1.63
CHMP4A-202ENST00000524955 PDXDC1Q6P996 788 aa4.9□□□□□ -1.63
CHMP4A-202ENST00000524955 FOXR2Q6PJQ5 311 aa4.9□□□□□ -1.63
CHMP4A-202ENST00000524955 POTEHQ6S545 545 aa4.9□□□□□ -1.63
CHMP4A-202ENST00000524955 PAQR9Q6ZVX9 377 aa4.9□□□□□ -1.63
CHMP4A-202ENST00000524955 GET4Q7L5D6 327 aaPredicted RBP4.9□□□□□ -1.63
CHMP4A-202ENST00000524955 GPRIN1Q7Z2K8 1008 aa4.9□□□□□ -1.63
CHMP4A-202ENST00000524955 FAM35AQ86V20 835 aa4.9□□□□□ -1.63
CHMP4A-202ENST00000524955 PPFIBP1Q86W92 1011 aa4.9□□□□□ -1.63
CHMP4A-202ENST00000524955 DCP1BQ8IZD4 617 aaKnown RBP4.9□□□□□ -1.63
CHMP4A-202ENST00000524955 TMEM86AQ8N2M4 240 aa4.9□□□□□ -1.63
CHMP4A-202ENST00000524955 UBR7Q8N806 425 aa4.9□□□□□ -1.63
CHMP4A-202ENST00000524955 SLC4A11Q8NBS3 891 aa4.9□□□□□ -1.63
CHMP4A-202ENST00000524955 RBBP8NLQ8NC74 664 aaPredicted RBP4.9□□□□□ -1.63
CHMP4A-202ENST00000524955 B3GALNT2Q8NCR0 500 aa4.9□□□□□ -1.63
CHMP4A-202ENST00000524955 ITFG1Q8TB96 612 aa4.9□□□□□ -1.63
CHMP4A-202ENST00000524955 UBA3Q8TBC4 463 aa4.9□□□□□ -1.63
CHMP4A-202ENST00000524955 MYCBPAPQ8TBZ2 947 aa4.9□□□□□ -1.63
CHMP4A-202ENST00000524955 SLC2A14Q8TDB8 520 aa4.9□□□□□ -1.63
CHMP4A-202ENST00000524955 TFAP2BQ92481 460 aa4.9□□□□□ -1.63
CHMP4A-202ENST00000524955 TAF4BQ92750 862 aa4.9□□□□□ -1.63
CHMP4A-202ENST00000524955 TCEAL4Q96EI5 215 aa4.9□□□□□ -1.63
CHMP4A-202ENST00000524955 RPGRIP1Q96KN7 1286 aa4.9□□□□□ -1.63
CHMP4A-202ENST00000524955 CDCA3Q99618 268 aaPredicted RBP4.9□□□□□ -1.63
CHMP4A-202ENST00000524955 BPIFA3Q9BQP9 254 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms