RNA–Protein interactions for RNA: ENST00000524509.1

PACSIN3-202, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 554 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-202ENST00000524509 UNC93AQ86WB7 457 aa18.78■□□□□ 0.6
PACSIN3-202ENST00000524509 EHBP1Q8NDI1 1231 aa18.78■□□□□ 0.6
PACSIN3-202ENST00000524509 OR6B3Q8NGW1 331 aa18.78■□□□□ 0.6
PACSIN3-202ENST00000524509 FAM200AQ8TCP9 573 aa18.78■□□□□ 0.6
PACSIN3-202ENST00000524509 JAKMIP2Q96AA8 810 aa18.78■□□□□ 0.6
PACSIN3-202ENST00000524509 RIPOR3Q96MK2 946 aa18.78■□□□□ 0.6
PACSIN3-202ENST00000524509 NT5C1BQ96P26 610 aa18.78■□□□□ 0.6
PACSIN3-202ENST00000524509 TSPY26PQ9H489 355 aa18.78■□□□□ 0.6
PACSIN3-202ENST00000524509 AFF4Q9UHB7 1163 aaKnown RBP18.78■□□□□ 0.6
PACSIN3-202ENST00000524509 CDH9Q9ULB4 789 aa18.78■□□□□ 0.6
PACSIN3-202ENST00000524509 HCFC2Q9Y5Z7 792 aa18.78■□□□□ 0.6
PACSIN3-202ENST00000524509 ANK1P16157 1881 aa18.77■□□□□ 0.6
PACSIN3-202ENST00000524509 LRRC10BA6NIK2 292 aa18.77■□□□□ 0.6
PACSIN3-202ENST00000524509 GALR2O43603 387 aaPredicted RBP18.77■□□□□ 0.6
PACSIN3-202ENST00000524509 ATF2P15336 505 aa18.77■□□□□ 0.6
PACSIN3-202ENST00000524509 KCNC3Q14003 757 aa18.77■□□□□ 0.6
PACSIN3-202ENST00000524509 EXOC3L4Q17RC7 722 aa18.77■□□□□ 0.6
PACSIN3-202ENST00000524509 FILIP1LQ4L180 1135 aa18.77■□□□□ 0.6
PACSIN3-202ENST00000524509 LILRA6Q6PI73 481 aa18.77■□□□□ 0.6
PACSIN3-202ENST00000524509 PALB2Q86YC2 1186 aa18.77■□□□□ 0.6
PACSIN3-202ENST00000524509 SLC22A17Q8WUG5 538 aa18.77■□□□□ 0.6
PACSIN3-202ENST00000524509 FAM84AQ96KN4 292 aa18.77■□□□□ 0.6
PACSIN3-202ENST00000524509 BCO2Q9BYV7 579 aa18.77■□□□□ 0.6
PACSIN3-202ENST00000524509 S1PR5Q9H228 398 aa18.77■□□□□ 0.6
PACSIN3-202ENST00000524509 DAAM1Q9Y4D1 1078 aa18.77■□□□□ 0.6
PACSIN3-202ENST00000524509 VPS13AQ96RL7 3174 aa18.76■□□□□ 0.59
PACSIN3-202ENST00000524509 A8MXQ7 604 aa18.76■□□□□ 0.59
PACSIN3-202ENST00000524509 TGM5O43548 720 aa18.76■□□□□ 0.59
PACSIN3-202ENST00000524509 ABLIM3O94929 683 aa18.76■□□□□ 0.59
PACSIN3-202ENST00000524509 HOXA9P31269 272 aa18.76■□□□□ 0.59
PACSIN3-202ENST00000524509 TUFMP49411 452 aaKnown RBP18.76■□□□□ 0.59
PACSIN3-202ENST00000524509 ARPP19P56211 112 aa18.76■□□□□ 0.59
PACSIN3-202ENST00000524509 ROR1Q01973 937 aa18.76■□□□□ 0.59
PACSIN3-202ENST00000524509 PLD1Q13393 1074 aa18.76■□□□□ 0.59
PACSIN3-202ENST00000524509 NCAPHQ15003 741 aa18.76■□□□□ 0.59
PACSIN3-202ENST00000524509 C4orf50Q6ZRC1 276 aa18.76■□□□□ 0.59
PACSIN3-202ENST00000524509 KREMEN2Q8NCW0 462 aa18.76■□□□□ 0.59
PACSIN3-202ENST00000524509 ZCWPW1Q9H0M4 648 aa18.76■□□□□ 0.59
PACSIN3-202ENST00000524509 SFXN1Q9H9B4 322 aa18.76■□□□□ 0.59
PACSIN3-202ENST00000524509 ZDHHC7Q9NXF8 308 aa18.76■□□□□ 0.59
PACSIN3-202ENST00000524509 GCNT4Q9P109 453 aa18.76■□□□□ 0.59
PACSIN3-202ENST00000524509 LIMA1Q9UHB6 759 aaKnown RBP18.76■□□□□ 0.59
PACSIN3-202ENST00000524509 RIF1Q5UIP0 2472 aaKnown RBP18.76■□□□□ 0.59
PACSIN3-202ENST00000524509 PDGFBP01127 241 aaPredicted RBP18.75■□□□□ 0.59
PACSIN3-202ENST00000524509 HNRNPA1P09651 372 aaKnown RBP eCLIP18.75■□□□□ 0.59
PACSIN3-202ENST00000524509 ZNF18P17022 549 aa18.75■□□□□ 0.59
PACSIN3-202ENST00000524509 RPL17P18621 184 aaKnown RBP18.75■□□□□ 0.59
PACSIN3-202ENST00000524509 ZNF445P59923 1031 aa18.75■□□□□ 0.59
PACSIN3-202ENST00000524509 GCNT1Q02742 428 aa18.75■□□□□ 0.59
PACSIN3-202ENST00000524509 ITIH3Q06033 890 aa18.75■□□□□ 0.59
PACSIN3-202ENST00000524509 KRT31Q15323 416 aa18.75■□□□□ 0.59
PACSIN3-202ENST00000524509 CES5AQ6NT32 575 aa18.75■□□□□ 0.59
PACSIN3-202ENST00000524509 ANKRD54Q6NXT1 300 aa18.75■□□□□ 0.59
PACSIN3-202ENST00000524509 ASCL5Q7RTU5 278 aa18.75■□□□□ 0.59
PACSIN3-202ENST00000524509 DHX40Q8IX18 779 aaKnown RBP18.75■□□□□ 0.59
PACSIN3-202ENST00000524509 TMEM130Q8N3G9 435 aa18.75■□□□□ 0.59
PACSIN3-202ENST00000524509 CMASQ8NFW8 434 aaPredicted RBP18.75■□□□□ 0.59
PACSIN3-202ENST00000524509 SPPL2BQ8TCT7 592 aa18.75■□□□□ 0.59
PACSIN3-202ENST00000524509 SEMA4DQ92854 862 aa18.75■□□□□ 0.59
PACSIN3-202ENST00000524509 FUBP3Q96I24 572 aaKnown RBP eCLIP18.75■□□□□ 0.59
PACSIN3-202ENST00000524509 PI4K2AQ9BTU6 479 aa18.75■□□□□ 0.59
PACSIN3-202ENST00000524509 RHOBTB2Q9BYZ6 727 aa18.75■□□□□ 0.59
PACSIN3-202ENST00000524509 ABCB6Q9NP58 842 aa18.75■□□□□ 0.59
PACSIN3-202ENST00000524509 FBXW11Q9UKB1 542 aa18.75■□□□□ 0.59
PACSIN3-202ENST00000524509 PRRG1O14668 218 aa18.74■□□□□ 0.59
PACSIN3-202ENST00000524509 XYLBO75191 536 aa18.74■□□□□ 0.59
PACSIN3-202ENST00000524509 RFX1P22670 979 aa18.74■□□□□ 0.59
PACSIN3-202ENST00000524509 NBL1P41271 181 aa18.74■□□□□ 0.59
PACSIN3-202ENST00000524509 ASPAP45381 313 aa18.74■□□□□ 0.59
PACSIN3-202ENST00000524509 INCA1Q0VD86 236 aa18.74■□□□□ 0.59
PACSIN3-202ENST00000524509 CUL2Q13617 745 aa18.74■□□□□ 0.59
PACSIN3-202ENST00000524509 IQCB1Q15051 598 aa18.74■□□□□ 0.59
PACSIN3-202ENST00000524509 HSP90AA4PQ58FG1 418 aa18.74■□□□□ 0.59
PACSIN3-202ENST00000524509 INTS6LQ5JSJ4 861 aaKnown RBP18.74■□□□□ 0.59
PACSIN3-202ENST00000524509 LLGL2Q6P1M3 1020 aa18.74■□□□□ 0.59
PACSIN3-202ENST00000524509 SYCE2Q6PIF2 218 aa18.74■□□□□ 0.59
PACSIN3-202ENST00000524509 GLYCTKQ8IVS8 523 aa18.74■□□□□ 0.59
PACSIN3-202ENST00000524509 TCEAL8Q8IYN2 117 aa18.74■□□□□ 0.59
PACSIN3-202ENST00000524509 UBALD2Q8IYN6 164 aa18.74■□□□□ 0.59
PACSIN3-202ENST00000524509 KBTBD7Q8WVZ9 684 aa18.74■□□□□ 0.59
PACSIN3-202ENST00000524509 SYT15Q9BQS2 421 aa18.74■□□□□ 0.59
PACSIN3-202ENST00000524509 NT5C1AQ9BXI3 368 aa18.74■□□□□ 0.59
PACSIN3-202ENST00000524509 CBX8Q9HC52 389 aa18.74■□□□□ 0.59
PACSIN3-202ENST00000524509 MAN1C1Q9NR34 630 aa18.74■□□□□ 0.59
PACSIN3-202ENST00000524509 PCDHB5Q9Y5E4 795 aa18.74■□□□□ 0.59
PACSIN3-202ENST00000524509 FAM186AA6NE01 2351 aa18.74■□□□□ 0.59
PACSIN3-202ENST00000524509 ATP8B3O60423 1300 aa18.74■□□□□ 0.59
PACSIN3-202ENST00000524509 WDR27A2RRH5 827 aa18.73■□□□□ 0.59
PACSIN3-202ENST00000524509 PRR23AA6NEV1 266 aa18.73■□□□□ 0.59
PACSIN3-202ENST00000524509 TPM3P06753 285 aa18.73■□□□□ 0.59
PACSIN3-202ENST00000524509 POU2F2P09086 479 aa18.73■□□□□ 0.59
PACSIN3-202ENST00000524509 MFAP3P55082 362 aa18.73■□□□□ 0.59
PACSIN3-202ENST00000524509 ADCY1Q08828 1119 aa18.73■□□□□ 0.59
PACSIN3-202ENST00000524509 PPM1LQ5SGD2 360 aa18.73■□□□□ 0.59
PACSIN3-202ENST00000524509 RSPO2Q6UXX9 243 aaPredicted RBP18.73■□□□□ 0.59
PACSIN3-202ENST00000524509 SCARA5Q6ZMJ2 495 aa18.73■□□□□ 0.59
PACSIN3-202ENST00000524509 ELMOD1Q8N336 334 aa18.73■□□□□ 0.59
PACSIN3-202ENST00000524509 PPM1KQ8N3J5 372 aa18.73■□□□□ 0.59
PACSIN3-202ENST00000524509 CEP295NLQ96MC4 621 aa18.73■□□□□ 0.59
PACSIN3-202ENST00000524509 MRPL45Q9BRJ2 306 aaKnown RBP18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms