RNA–Protein interactions for RNA: ENST00000524213.5

CSGALNACT1-216, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-216ENST00000524213 CYP3A43Q9HB55 503 aa17.74■□□□□ 0.43
CSGALNACT1-216ENST00000524213 MAGEC2Q9UBF1 373 aaPredicted RBP17.74■□□□□ 0.43
CSGALNACT1-216ENST00000524213 LIMD1Q9UGP4 676 aa17.74■□□□□ 0.43
CSGALNACT1-216ENST00000524213 POLIQ9UNA4 740 aa17.74■□□□□ 0.43
CSGALNACT1-216ENST00000524213 PCDHB5Q9Y5E4 795 aa17.74■□□□□ 0.43
CSGALNACT1-216ENST00000524213 INSL5Q9Y5Q6 135 aa17.74■□□□□ 0.43
CSGALNACT1-216ENST00000524213 SEC24AO95486 1093 aa17.73■□□□□ 0.43
CSGALNACT1-216ENST00000524213 ASGR2P07307 311 aa17.73■□□□□ 0.43
CSGALNACT1-216ENST00000524213 ZXDAP98168 799 aa17.73■□□□□ 0.43
CSGALNACT1-216ENST00000524213 CBWD6Q4V339 395 aa17.73■□□□□ 0.43
CSGALNACT1-216ENST00000524213 CBWD3Q5JTY5 395 aa17.73■□□□□ 0.43
CSGALNACT1-216ENST00000524213 CBWD5Q5RIA9 395 aa17.73■□□□□ 0.43
CSGALNACT1-216ENST00000524213 ENOX1Q8TC92 643 aaKnown RBP17.73■□□□□ 0.43
CSGALNACT1-216ENST00000524213 MYADMQ96S97 322 aa17.73■□□□□ 0.43
CSGALNACT1-216ENST00000524213 MRPL45Q9BRJ2 306 aaKnown RBP17.73■□□□□ 0.43
CSGALNACT1-216ENST00000524213 DNAI2Q9GZS0 605 aa17.73■□□□□ 0.43
CSGALNACT1-216ENST00000524213 NIF3L1Q9GZT8 377 aa17.73■□□□□ 0.43
CSGALNACT1-216ENST00000524213 A8MXQ7 604 aa17.72■□□□□ 0.43
CSGALNACT1-216ENST00000524213 AFPP02771 609 aaKnown RBP17.72■□□□□ 0.43
CSGALNACT1-216ENST00000524213 PRKCSHP14314 528 aaPredicted RBP17.72■□□□□ 0.43
CSGALNACT1-216ENST00000524213 ACAT1P24752 427 aaKnown RBP17.72■□□□□ 0.43
CSGALNACT1-216ENST00000524213 GBP2P32456 591 aaPredicted RBP17.72■□□□□ 0.43
CSGALNACT1-216ENST00000524213 ALDH1A3P47895 512 aa17.72■□□□□ 0.43
CSGALNACT1-216ENST00000524213 KCNH2Q12809 1159 aa17.72■□□□□ 0.43
CSGALNACT1-216ENST00000524213 DUSP4Q13115 394 aa17.72■□□□□ 0.43
CSGALNACT1-216ENST00000524213 SCARA5Q6ZMJ2 495 aa17.72■□□□□ 0.43
CSGALNACT1-216ENST00000524213 C4orf50Q6ZRC1 276 aa17.72■□□□□ 0.43
CSGALNACT1-216ENST00000524213 LRRTM3Q86VH5 581 aa17.72■□□□□ 0.43
CSGALNACT1-216ENST00000524213 CREBRFQ8IUR6 639 aa17.72■□□□□ 0.43
CSGALNACT1-216ENST00000524213 TTC39CQ8N584 583 aa17.72■□□□□ 0.43
CSGALNACT1-216ENST00000524213 ATAD1Q8NBU5 361 aa17.72■□□□□ 0.43
CSGALNACT1-216ENST00000524213 FUBP3Q96I24 572 aaKnown RBP eCLIP17.72■□□□□ 0.43
CSGALNACT1-216ENST00000524213 TNIP3Q96KP6 325 aa17.72■□□□□ 0.43
CSGALNACT1-216ENST00000524213 PI4K2AQ9BTU6 479 aa17.72■□□□□ 0.43
CSGALNACT1-216ENST00000524213 BCO2Q9BYV7 579 aa17.72■□□□□ 0.43
CSGALNACT1-216ENST00000524213 FAM124BQ9H5Z6 455 aaPredicted RBP17.72■□□□□ 0.43
CSGALNACT1-216ENST00000524213 SMYD3Q9H7B4 428 aa17.72■□□□□ 0.43
CSGALNACT1-216ENST00000524213 ABCB6Q9NP58 842 aa17.72■□□□□ 0.43
CSGALNACT1-216ENST00000524213 HCFC1R1Q9NWW0 138 aa17.72■□□□□ 0.43
CSGALNACT1-216ENST00000524213 YIPF1Q9Y548 306 aa17.72■□□□□ 0.43
CSGALNACT1-216ENST00000524213 PDGFRBP09619 1106 aa17.71■□□□□ 0.43
CSGALNACT1-216ENST00000524213 PTPN2P17706 415 aa17.71■□□□□ 0.43
CSGALNACT1-216ENST00000524213 FSHRP23945 695 aa17.71■□□□□ 0.43
CSGALNACT1-216ENST00000524213 LMO2P25791 158 aa17.71■□□□□ 0.43
CSGALNACT1-216ENST00000524213 MTIF2P46199 727 aaKnown RBP17.71■□□□□ 0.43
CSGALNACT1-216ENST00000524213 EPHB3P54753 998 aa17.71■□□□□ 0.43
CSGALNACT1-216ENST00000524213 TWF1Q12792 350 aa17.71■□□□□ 0.43
CSGALNACT1-216ENST00000524213 MGAT5BQ3V5L5 792 aa17.71■□□□□ 0.43
CSGALNACT1-216ENST00000524213 IQCEQ6IPM2 695 aa17.71■□□□□ 0.43
CSGALNACT1-216ENST00000524213 SPOPLQ6IQ16 392 aa17.71■□□□□ 0.43
CSGALNACT1-216ENST00000524213 FAM171BQ6P995 826 aa17.71■□□□□ 0.43
CSGALNACT1-216ENST00000524213 GET4Q7L5D6 327 aaPredicted RBP17.71■□□□□ 0.43
CSGALNACT1-216ENST00000524213 UNC93AQ86WB7 457 aa17.71■□□□□ 0.43
CSGALNACT1-216ENST00000524213 SPATA2LQ8IUW3 424 aaPredicted RBP17.71■□□□□ 0.43
CSGALNACT1-216ENST00000524213 SEMA4DQ92854 862 aa17.71■□□□□ 0.43
CSGALNACT1-216ENST00000524213 ZNF512Q96ME7 567 aaPredicted RBP17.71■□□□□ 0.43
CSGALNACT1-216ENST00000524213 PKMYT1Q99640 499 aa17.71■□□□□ 0.43
CSGALNACT1-216ENST00000524213 SMOC2Q9H3U7 446 aa17.71■□□□□ 0.43
CSGALNACT1-216ENST00000524213 APOBEC3GQ9HC16 384 aaKnown RBP17.71■□□□□ 0.43
CSGALNACT1-216ENST00000524213 ABI2Q9NYB9 513 aaPredicted RBP17.71■□□□□ 0.43
CSGALNACT1-216ENST00000524213 DNMT3BQ9UBC3 853 aaKnown RBP17.71■□□□□ 0.43
CSGALNACT1-216ENST00000524213 GTF3C4Q9UKN8 822 aa17.71■□□□□ 0.43
CSGALNACT1-216ENST00000524213 ASB3Q9Y575 518 aa17.71■□□□□ 0.43
CSGALNACT1-216ENST00000524213 VNN2O95498 520 aa17.7■□□□□ 0.42
CSGALNACT1-216ENST00000524213 HAPLN1P10915 354 aaPredicted RBP17.7■□□□□ 0.42
CSGALNACT1-216ENST00000524213 ASPAP45381 313 aa17.7■□□□□ 0.42
CSGALNACT1-216ENST00000524213 CDH8P55286 799 aa17.7■□□□□ 0.42
CSGALNACT1-216ENST00000524213 TYRO3Q06418 890 aa17.7■□□□□ 0.42
CSGALNACT1-216ENST00000524213 VEPH1Q14D04 833 aa17.7■□□□□ 0.42
CSGALNACT1-216ENST00000524213 CFAP221Q4G0U5 840 aa17.7■□□□□ 0.42
CSGALNACT1-216ENST00000524213 LEMD2Q8NC56 503 aa17.7■□□□□ 0.42
CSGALNACT1-216ENST00000524213 SEPT5Q99719 369 aaPredicted RBP17.7■□□□□ 0.42
CSGALNACT1-216ENST00000524213 NAT10Q9H0A0 1025 aaKnown RBP17.7■□□□□ 0.42
CSGALNACT1-216ENST00000524213 SORCS3Q9UPU3 1222 aa17.7■□□□□ 0.42
CSGALNACT1-216ENST00000524213 SLC27A5Q9Y2P5 690 aa17.7■□□□□ 0.42
CSGALNACT1-216ENST00000524213 MYBPHLA2RUH7 354 aa17.69■□□□□ 0.42
CSGALNACT1-216ENST00000524213 PRR33A8MZF0 331 aa17.69■□□□□ 0.42
CSGALNACT1-216ENST00000524213 PTPN1P18031 435 aaKnown RBP17.69■□□□□ 0.42
CSGALNACT1-216ENST00000524213 TBXAS1P24557 533 aaPredicted RBP17.69■□□□□ 0.42
CSGALNACT1-216ENST00000524213 YWHAEP62258 255 aaKnown RBP17.69■□□□□ 0.42
CSGALNACT1-216ENST00000524213 RPL10AP62906 217 aaKnown RBP17.69■□□□□ 0.42
CSGALNACT1-216ENST00000524213 TRIM67Q6ZTA4 783 aa17.69■□□□□ 0.42
CSGALNACT1-216ENST00000524213 ITIH5Q86UX2 942 aa17.69■□□□□ 0.42
CSGALNACT1-216ENST00000524213 IRF2BP1Q8IU81 584 aa17.69■□□□□ 0.42
CSGALNACT1-216ENST00000524213 B3GALNT2Q8NCR0 500 aa17.69■□□□□ 0.42
CSGALNACT1-216ENST00000524213 ITFG1Q8TB96 612 aa17.69■□□□□ 0.42
CSGALNACT1-216ENST00000524213 MYCBPAPQ8TBZ2 947 aa17.69■□□□□ 0.42
CSGALNACT1-216ENST00000524213 NT5C1BQ96P26 610 aa17.69■□□□□ 0.42
CSGALNACT1-216ENST00000524213 SDCBP2Q9H190 292 aa17.69■□□□□ 0.42
CSGALNACT1-216ENST00000524213 CRISPLD1Q9H336 500 aa17.69■□□□□ 0.42
CSGALNACT1-216ENST00000524213 AVENQ9NQS1 362 aaPredicted RBP17.69■□□□□ 0.42
CSGALNACT1-216ENST00000524213 TMLHEQ9NVH6 421 aa17.69■□□□□ 0.42
CSGALNACT1-216ENST00000524213 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.69■□□□□ 0.421e-7■■■□□ 14.9
CSGALNACT1-216ENST00000524213 EPS15L1Q9UBC2 864 aa17.69■□□□□ 0.42
CSGALNACT1-216ENST00000524213 NFE2L3Q9Y4A8 694 aa17.69■□□□□ 0.42
CSGALNACT1-216ENST00000524213 ZNF197O14709 1029 aa17.68■□□□□ 0.42
CSGALNACT1-216ENST00000524213 HCRTO43612 131 aa17.68■□□□□ 0.42
CSGALNACT1-216ENST00000524213 EEF1GP26641 437 aaKnown RBP17.68■□□□□ 0.42
CSGALNACT1-216ENST00000524213 MAGEA11P43364 429 aa17.68■□□□□ 0.42
CSGALNACT1-216ENST00000524213 RAP1GAPP47736 663 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms