RNA–Protein interactions for RNA: ENST00000524028.1

PTP4A3-206, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 5 BASIC

Gene PTP4A3, Length 963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-206ENST00000524028 NOC3LQ8WTT2 800 aaKnown RBP20.21■□□□□ 0.83
PTP4A3-206ENST00000524028 GCNAQ96QF7 691 aa20.21■□□□□ 0.83
PTP4A3-206ENST00000524028 ACBD6Q9BR61 282 aa20.21■□□□□ 0.83
PTP4A3-206ENST00000524028 BACH2Q9BYV9 841 aa20.21■□□□□ 0.83
PTP4A3-206ENST00000524028 MTMR12Q9C0I1 747 aa20.21■□□□□ 0.83
PTP4A3-206ENST00000524028 TMEM206Q9H813 350 aa20.21■□□□□ 0.83
PTP4A3-206ENST00000524028 C2orf42Q9NWW7 574 aa20.21■□□□□ 0.83
PTP4A3-206ENST00000524028 DDX43Q9NXZ2 648 aaKnown RBP20.21■□□□□ 0.83
PTP4A3-206ENST00000524028 TFIP11Q9UBB9 837 aaKnown RBP20.21■□□□□ 0.83
PTP4A3-206ENST00000524028 ITGA11Q9UKX5 1188 aa20.21■□□□□ 0.83
PTP4A3-206ENST00000524028 CCL26Q9Y258 94 aa20.21■□□□□ 0.83
PTP4A3-206ENST00000524028 PTPRJQ12913 1337 aa20.21■□□□□ 0.83
PTP4A3-206ENST00000524028 DNAH14Q0VDD8 3507 aa20.2■□□□□ 0.82
PTP4A3-206ENST00000524028 K7ELQ4 463 aaPredicted RBP20.2■□□□□ 0.82
PTP4A3-206ENST00000524028 HUS1O60921 280 aa20.2■□□□□ 0.82
PTP4A3-206ENST00000524028 KRT19P08727 400 aa20.2■□□□□ 0.82
PTP4A3-206ENST00000524028 CYP2F1P24903 491 aa20.2■□□□□ 0.82
PTP4A3-206ENST00000524028 HOXC13P31276 330 aa20.2■□□□□ 0.82
PTP4A3-206ENST00000524028 HOXD13P35453 343 aa20.2■□□□□ 0.82
PTP4A3-206ENST00000524028 TSPY1Q01534 308 aa20.2■□□□□ 0.82
PTP4A3-206ENST00000524028 PON2Q15165 354 aa20.2■□□□□ 0.82
PTP4A3-206ENST00000524028 E2F4Q16254 413 aa20.2■□□□□ 0.82
PTP4A3-206ENST00000524028 DDR2Q16832 855 aa20.2■□□□□ 0.82
PTP4A3-206ENST00000524028 C1orf228Q6PIY5 440 aa20.2■□□□□ 0.82
PTP4A3-206ENST00000524028 CCDC65Q8IXS2 484 aa20.2■□□□□ 0.82
PTP4A3-206ENST00000524028 GPD1LQ8N335 351 aa20.2■□□□□ 0.82
PTP4A3-206ENST00000524028 SPEM1Q8N4L4 309 aa20.2■□□□□ 0.82
PTP4A3-206ENST00000524028 CELF5Q8N6W0 485 aaKnown RBP20.2■□□□□ 0.82
PTP4A3-206ENST00000524028 MAB21L3Q8N8X9 362 aa20.2■□□□□ 0.82
PTP4A3-206ENST00000524028 LEO1Q8WVC0 666 aaPredicted RBP20.2■□□□□ 0.82
PTP4A3-206ENST00000524028 GDAP2Q9NXN4 497 aa20.2■□□□□ 0.82
PTP4A3-206ENST00000524028 GTF3C4Q9UKN8 822 aa20.2■□□□□ 0.82
PTP4A3-206ENST00000524028 SNX9Q9Y5X1 595 aa20.2■□□□□ 0.82
PTP4A3-206ENST00000524028 TGM1P22735 817 aa20.19■□□□□ 0.82
PTP4A3-206ENST00000524028 NRLP54845 237 aa20.19■□□□□ 0.82
PTP4A3-206ENST00000524028 RBP5P82980 135 aa20.19■□□□□ 0.82
PTP4A3-206ENST00000524028 PLCB2Q00722 1185 aa20.19■□□□□ 0.82
PTP4A3-206ENST00000524028 LRRC32Q14392 662 aa20.19■□□□□ 0.82
PTP4A3-206ENST00000524028 PPP2R5DQ14738 602 aa20.19■□□□□ 0.82
PTP4A3-206ENST00000524028 STK38Q15208 465 aa20.19■□□□□ 0.82
PTP4A3-206ENST00000524028 NFE2Q16621 373 aaPredicted RBP20.19■□□□□ 0.82
PTP4A3-206ENST00000524028 SOWAHAQ2M3V2 549 aa20.19■□□□□ 0.82
PTP4A3-206ENST00000524028 INTS6LQ5JSJ4 861 aaKnown RBP20.19■□□□□ 0.82
PTP4A3-206ENST00000524028 TXNDC8Q6A555 127 aa20.19■□□□□ 0.82
PTP4A3-206ENST00000524028 TMEM86AQ8N2M4 240 aa20.19■□□□□ 0.82
PTP4A3-206ENST00000524028 OR5B17Q8NGF7 314 aa20.19■□□□□ 0.82
PTP4A3-206ENST00000524028 RIN3Q8TB24 985 aa20.19■□□□□ 0.82
PTP4A3-206ENST00000524028 USP13Q92995 863 aaPredicted RBP20.19■□□□□ 0.82
PTP4A3-206ENST00000524028 GKN1Q9NS71 199 aa20.19■□□□□ 0.82
PTP4A3-206ENST00000524028 KBTBD4Q9NVX7 518 aa20.19■□□□□ 0.82
PTP4A3-206ENST00000524028 DLL3Q9NYJ7 618 aa20.19■□□□□ 0.82
PTP4A3-206ENST00000524028 MAGED2Q9UNF1 606 aaPredicted RBP20.19■□□□□ 0.82
PTP4A3-206ENST00000524028 CEP250Q9BV73 2442 aa20.18■□□□□ 0.82
PTP4A3-206ENST00000524028 OTOL1A6NHN0 477 aaPredicted RBP20.18■□□□□ 0.82
PTP4A3-206ENST00000524028 K7ESF4 209 aa20.18■□□□□ 0.82
PTP4A3-206ENST00000524028 GABRDO14764 452 aa20.18■□□□□ 0.82
PTP4A3-206ENST00000524028 SPTLC2O15270 562 aa20.18■□□□□ 0.82
PTP4A3-206ENST00000524028 CCINQ13939 588 aa20.18■□□□□ 0.82
PTP4A3-206ENST00000524028 LPAL2Q16609 132 aa20.18■□□□□ 0.82
PTP4A3-206ENST00000524028 DGKKQ5KSL6 1271 aa20.18■□□□□ 0.82
PTP4A3-206ENST00000524028 CBWD2Q8IUF1 395 aa20.18■□□□□ 0.82
PTP4A3-206ENST00000524028 CHFRQ96EP1 664 aa20.18■□□□□ 0.82
PTP4A3-206ENST00000524028 FAM83CQ9BQN1 747 aa20.18■□□□□ 0.82
PTP4A3-206ENST00000524028 TRIM9Q9C026 710 aa20.18■□□□□ 0.82
PTP4A3-206ENST00000524028 TNMDQ9H2S6 317 aa20.18■□□□□ 0.82
PTP4A3-206ENST00000524028 INTS13Q9NVM9 706 aa20.18■□□□□ 0.82
PTP4A3-206ENST00000524028 THG1LQ9NWX6 298 aaKnown RBP20.18■□□□□ 0.82
PTP4A3-206ENST00000524028 NUP210Q8TEM1 1887 aaPredicted RBP20.18■□□□□ 0.82
PTP4A3-206ENST00000524028 CHURC1-FNTBB4DL54 471 aa20.17■□□□□ 0.82
PTP4A3-206ENST00000524028 PPP6R2O75170 966 aa20.17■□□□□ 0.82
PTP4A3-206ENST00000524028 TADA3O75528 432 aa20.17■□□□□ 0.82
PTP4A3-206ENST00000524028 TMEM191BP0C7N4 346 aa20.17■□□□□ 0.82
PTP4A3-206ENST00000524028 CSH1P0DML2 217 aa20.17■□□□□ 0.82
PTP4A3-206ENST00000524028 CSH2P0DML3 217 aa20.17■□□□□ 0.82
PTP4A3-206ENST00000524028 AVPR1AP37288 418 aa20.17■□□□□ 0.82
PTP4A3-206ENST00000524028 FNTBP49356 437 aa20.17■□□□□ 0.82
PTP4A3-206ENST00000524028 MYL7Q01449 175 aa20.17■□□□□ 0.82
PTP4A3-206ENST00000524028 PUM1Q14671 1186 aaKnown RBP eCLIP20.17■□□□□ 0.82
PTP4A3-206ENST00000524028 RSPO4Q2I0M5 234 aaPredicted RBP20.17■□□□□ 0.82
PTP4A3-206ENST00000524028 ITPRIPL2Q3MIP1 535 aa20.17■□□□□ 0.82
PTP4A3-206ENST00000524028 TRIM68Q6AZZ1 485 aa20.17■□□□□ 0.82
PTP4A3-206ENST00000524028 SHC4Q6S5L8 630 aa20.17■□□□□ 0.82
PTP4A3-206ENST00000524028 DGLUCYQ7Z3D6 616 aa20.17■□□□□ 0.82
PTP4A3-206ENST00000524028 LIMS2Q7Z4I7 341 aa20.17■□□□□ 0.82
PTP4A3-206ENST00000524028 ADGRF2Q8IZF7 708 aa20.17■□□□□ 0.82
PTP4A3-206ENST00000524028 TOP6BLQ8N6T0 577 aa20.17■□□□□ 0.82
PTP4A3-206ENST00000524028 ABCB6Q9NP58 842 aa20.17■□□□□ 0.82
PTP4A3-206ENST00000524028 PARD6AQ9NPB6 346 aa20.17■□□□□ 0.82
PTP4A3-206ENST00000524028 HPS4Q9NQG7 708 aa20.17■□□□□ 0.82
PTP4A3-206ENST00000524028 MED19A0JLT2 244 aaPredicted RBP20.16■□□□□ 0.82
PTP4A3-206ENST00000524028 KIAA0391O15091 583 aaKnown RBP20.16■□□□□ 0.82
PTP4A3-206ENST00000524028 HRO43593 1189 aa20.16■□□□□ 0.82
PTP4A3-206ENST00000524028 ATP2C2O75185 946 aa20.16■□□□□ 0.82
PTP4A3-206ENST00000524028 NOL4O94818 638 aa20.16■□□□□ 0.82
PTP4A3-206ENST00000524028 PAPSS2O95340 614 aaPredicted RBP20.16■□□□□ 0.82
PTP4A3-206ENST00000524028 DDX6P26196 483 aaKnown RBP eCLIP20.16■□□□□ 0.823e-6■■□□□ 12.1
PTP4A3-206ENST00000524028 SRSF5Q13243 272 aaKnown RBP20.16■□□□□ 0.82
PTP4A3-206ENST00000524028 EPM2AIP1Q7L775 607 aaPredicted RBP20.16■□□□□ 0.82
PTP4A3-206ENST00000524028 MON1AQ86VX9 555 aa20.16■□□□□ 0.82
PTP4A3-206ENST00000524028 KBTBD7Q8WVZ9 684 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms